RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 RPS16P62249 146 aaKnown RBP6.82□□□□□ -1.32
VTI1A-207ENST00000489357 HABP2Q14520 560 aaPredicted RBP6.82□□□□□ -1.32
VTI1A-207ENST00000489357 ELOBQ15370 118 aa6.82□□□□□ -1.32
VTI1A-207ENST00000489357 AKIRIN2Q53H80 203 aa6.82□□□□□ -1.32
VTI1A-207ENST00000489357 C11orf71Q6IPW1 123 aa6.82□□□□□ -1.32
VTI1A-207ENST00000489357 SPNS3Q6ZMD2 512 aa6.82□□□□□ -1.32
VTI1A-207ENST00000489357 FAM24BQ8N5W8 94 aa6.82□□□□□ -1.32
VTI1A-207ENST00000489357 KIR3DL3Q8N743 410 aa6.82□□□□□ -1.32
VTI1A-207ENST00000489357 STPG3Q8N7X2 389 aa6.82□□□□□ -1.32
VTI1A-207ENST00000489357 OR4P4Q8NGL7 312 aa6.82□□□□□ -1.32
VTI1A-207ENST00000489357 GATAD1Q8WUU5 269 aa6.82□□□□□ -1.32
VTI1A-207ENST00000489357 FOXC2Q99958 501 aa6.82□□□□□ -1.32
VTI1A-207ENST00000489357 PARLQ9H300 379 aa6.82□□□□□ -1.32
VTI1A-207ENST00000489357 MTORP42345 2549 aa6.82□□□□□ -1.32
VTI1A-207ENST00000489357 ACANP16112 2415 aa6.81□□□□□ -1.32
VTI1A-207ENST00000489357 HIVEP1P15822 2718 aa6.81□□□□□ -1.32
VTI1A-207ENST00000489357 PPIAL4CA0A0B4J2A2 164 aa6.81□□□□□ -1.32
VTI1A-207ENST00000489357 C5orf52A6NGY3 159 aa6.81□□□□□ -1.32
VTI1A-207ENST00000489357 OOSP1A8MZH6 123 aa6.81□□□□□ -1.32
VTI1A-207ENST00000489357 BUB1B-PAK6H3BSN5 160 aa6.81□□□□□ -1.32
VTI1A-207ENST00000489357 UBE2CO00762 179 aa6.81□□□□□ -1.32
VTI1A-207ENST00000489357 PAGE4O60829 102 aa6.81□□□□□ -1.32
VTI1A-207ENST00000489357 OR5G3P0C626 314 aa6.81□□□□□ -1.32
VTI1A-207ENST00000489357 PPIAL4GP0DN37 164 aa6.81□□□□□ -1.32
VTI1A-207ENST00000489357 AKR1C3P42330 323 aa6.81□□□□□ -1.32
VTI1A-207ENST00000489357 MIC13Q5XKP0 118 aa6.81□□□□□ -1.32
VTI1A-207ENST00000489357 LRRC75A-AS1Q8N1F1 130 aa6.81□□□□□ -1.32
VTI1A-207ENST00000489357 OR11H6Q8NGC7 330 aa6.81□□□□□ -1.32
VTI1A-207ENST00000489357 OR1L6Q8NGR2 347 aa6.81□□□□□ -1.32
VTI1A-207ENST00000489357 OR4F5Q8NH21 305 aa6.81□□□□□ -1.32
VTI1A-207ENST00000489357 C22orf15Q8WYQ4 148 aa6.81□□□□□ -1.32
VTI1A-207ENST00000489357 C11orf52Q96A22 123 aa6.81□□□□□ -1.32
VTI1A-207ENST00000489357 ISOC2Q96AB3 205 aa6.81□□□□□ -1.32
VTI1A-207ENST00000489357 RPUSD4Q96CM3 377 aaKnown RBP6.81□□□□□ -1.32
VTI1A-207ENST00000489357 C1orf159Q96HA4 380 aa6.81□□□□□ -1.32
VTI1A-207ENST00000489357 UHRF2Q96PU4 802 aa6.81□□□□□ -1.32
VTI1A-207ENST00000489357 OR4F4Q96R69 305 aa6.81□□□□□ -1.32
VTI1A-207ENST00000489357 PFDN5Q99471 154 aa6.81□□□□□ -1.32
VTI1A-207ENST00000489357 PYGO2Q9BRQ0 406 aa6.81□□□□□ -1.32
VTI1A-207ENST00000489357 PATZ1Q9HBE1 687 aaKnown RBP6.81□□□□□ -1.32
VTI1A-207ENST00000489357 BEX4Q9NWD9 120 aaPredicted RBP6.81□□□□□ -1.32
VTI1A-207ENST00000489357 TECRQ9NZ01 308 aaKnown RBP6.81□□□□□ -1.32
VTI1A-207ENST00000489357 FUT9Q9Y231 359 aa6.81□□□□□ -1.32
VTI1A-207ENST00000489357 TRAV9-1A0A075B6T8 112 aa6.8□□□□□ -1.32
VTI1A-207ENST00000489357 C9JCJ5 164 aa6.8□□□□□ -1.32
VTI1A-207ENST00000489357 ACTL6BO94805 426 aa6.8□□□□□ -1.32
VTI1A-207ENST00000489357 IGHV2-5P01817 119 aa6.8□□□□□ -1.32
VTI1A-207ENST00000489357 CRYGBP07316 175 aa6.8□□□□□ -1.32
VTI1A-207ENST00000489357 SOD3P08294 240 aa6.8□□□□□ -1.32
VTI1A-207ENST00000489357 LINC00869P0C866 280 aa6.8□□□□□ -1.32
VTI1A-207ENST00000489357 ARL14EPLP0DKL9 152 aa6.8□□□□□ -1.32
VTI1A-207ENST00000489357 GCHFRP30047 84 aa6.8□□□□□ -1.32
VTI1A-207ENST00000489357 SRP14P37108 136 aaKnown RBP6.8□□□□□ -1.32
VTI1A-207ENST00000489357 RPL23P62829 140 aaKnown RBP6.8□□□□□ -1.32
VTI1A-207ENST00000489357 LCN2P80188 198 aa6.8□□□□□ -1.32
VTI1A-207ENST00000489357 GAMTQ14353 236 aa6.8□□□□□ -1.32
VTI1A-207ENST00000489357 TET2Q6N021 2002 aaPredicted RBP6.8□□□□□ -1.32
VTI1A-207ENST00000489357 PRSS57Q6UWY2 283 aa6.8□□□□□ -1.32
VTI1A-207ENST00000489357 SLC16A13Q7RTY0 426 aa6.8□□□□□ -1.32
VTI1A-207ENST00000489357 KRTAP1-3Q8IUG1 177 aa6.8□□□□□ -1.32
VTI1A-207ENST00000489357 THAP8Q8NA92 274 aa6.8□□□□□ -1.32
VTI1A-207ENST00000489357 STXBP6Q8NFX7 210 aa6.8□□□□□ -1.32
VTI1A-207ENST00000489357 OR1L4Q8NGR5 311 aa6.8□□□□□ -1.32
VTI1A-207ENST00000489357 Q8WTZ3 238 aa6.8□□□□□ -1.32
VTI1A-207ENST00000489357 OR5B12Q96R08 314 aa6.8□□□□□ -1.32
VTI1A-207ENST00000489357 HINT2Q9BX68 163 aa6.8□□□□□ -1.32
VTI1A-207ENST00000489357 ZNF430Q9H8G1 570 aaPredicted RBP6.8□□□□□ -1.32
VTI1A-207ENST00000489357 ZNF469Q96JG9 3925 aaPredicted RBP6.8□□□□□ -1.32
VTI1A-207ENST00000489357 IGHV1-3A0A0C4DH29 117 aa6.79□□□□□ -1.32
VTI1A-207ENST00000489357 A0A1W2PRE2 83 aa6.79□□□□□ -1.32
VTI1A-207ENST00000489357 LY6LH3BQJ8 138 aa6.79□□□□□ -1.32
VTI1A-207ENST00000489357 H7BYZ3 331 aa6.79□□□□□ -1.32
VTI1A-207ENST00000489357 AP4M1O00189 453 aa6.79□□□□□ -1.32
VTI1A-207ENST00000489357 HMGB3O15347 200 aaKnown RBP6.79□□□□□ -1.32
VTI1A-207ENST00000489357 CRYGCP07315 174 aa6.79□□□□□ -1.32
VTI1A-207ENST00000489357 SMIM6P0DI80 62 aa6.79□□□□□ -1.32
VTI1A-207ENST00000489357 COL8A2P25067 703 aa6.79□□□□□ -1.32
VTI1A-207ENST00000489357 GPR6P46095 362 aaPredicted RBP6.79□□□□□ -1.32
VTI1A-207ENST00000489357 BPIFB3P59826 476 aa6.79□□□□□ -1.32
VTI1A-207ENST00000489357 PRSS8Q16651 343 aa6.79□□□□□ -1.32
VTI1A-207ENST00000489357 CCDC144NLQ6NUI1 221 aa6.79□□□□□ -1.32
VTI1A-207ENST00000489357 KCNIP4Q6PIL6 250 aa6.79□□□□□ -1.32
VTI1A-207ENST00000489357 IQCF2Q8IXL9 164 aa6.79□□□□□ -1.32
VTI1A-207ENST00000489357 LINC00518Q8N0U6 118 aa6.79□□□□□ -1.32
VTI1A-207ENST00000489357 OR1P1Q8NH06 330 aa6.79□□□□□ -1.32
VTI1A-207ENST00000489357 ABHD5Q8WTS1 349 aa6.79□□□□□ -1.32
VTI1A-207ENST00000489357 RPEQ96AT9 228 aa6.79□□□□□ -1.32
VTI1A-207ENST00000489357 FAM210BQ96KR6 192 aa6.79□□□□□ -1.32
VTI1A-207ENST00000489357 TMPRSS5Q9H3S3 457 aa6.79□□□□□ -1.32
VTI1A-207ENST00000489357 SAV1Q9H4B6 383 aaPredicted RBP6.79□□□□□ -1.32
VTI1A-207ENST00000489357 C19orf73Q9NVV2 129 aa6.79□□□□□ -1.32
VTI1A-207ENST00000489357 SIGLEC9Q9Y336 463 aa6.79□□□□□ -1.32
VTI1A-207ENST00000489357 INSIG2Q9Y5U4 225 aa6.79□□□□□ -1.32
VTI1A-207ENST00000489357 TEP1Q99973 2627 aaKnown RBP6.79□□□□□ -1.32
VTI1A-207ENST00000489357 VPS13CQ709C8 3753 aa6.79□□□□□ -1.32
VTI1A-207ENST00000489357 CSPG4Q6UVK1 2322 aa6.78□□□□□ -1.32
VTI1A-207ENST00000489357 TCRBV4S1A1TA0A5B7 111 aa6.78□□□□□ -1.32
VTI1A-207ENST00000489357 SLC25A17O43808 307 aa6.78□□□□□ -1.32
VTI1A-207ENST00000489357 TYMSP04818 313 aa6.78□□□□□ -1.32
VTI1A-207ENST00000489357 PFN1P07737 140 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms