RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 WHAMMP3Q1A5X7 153 aa2.14□□□□□ -2.07
PRPF4-203ENST00000488937 LINC01554Q52M75 96 aa2.14□□□□□ -2.07
PRPF4-203ENST00000488937 C1orf140Q5VVS0 124 aa2.14□□□□□ -2.07
PRPF4-203ENST00000488937 ZFP2Q6ZN57 461 aa2.14□□□□□ -2.07
PRPF4-203ENST00000488937 IDO2Q6ZQW0 420 aa2.14□□□□□ -2.07
PRPF4-203ENST00000488937 C10orf126Q8N4M7 172 aa2.14□□□□□ -2.07
PRPF4-203ENST00000488937 CYB561D1Q8N8Q1 229 aa2.14□□□□□ -2.07
PRPF4-203ENST00000488937 OR52R1Q8NGF1 315 aa2.14□□□□□ -2.07
PRPF4-203ENST00000488937 TERB2Q8NHR7 220 aa2.14□□□□□ -2.07
PRPF4-203ENST00000488937 CLDND2Q8NHS1 167 aa2.14□□□□□ -2.07
PRPF4-203ENST00000488937 MUC7Q8TAX7 377 aa2.14□□□□□ -2.07
PRPF4-203ENST00000488937 HIST1H2BAQ96A08 127 aa2.14□□□□□ -2.07
PRPF4-203ENST00000488937 GGACTQ9BVM4 153 aa2.14□□□□□ -2.07
PRPF4-203ENST00000488937 YIPF3Q9GZM5 350 aa2.14□□□□□ -2.07
PRPF4-203ENST00000488937 CALML5Q9NZT1 146 aa2.14□□□□□ -2.07
PRPF4-203ENST00000488937 SNX12Q9UMY4 172 aa2.14□□□□□ -2.07
PRPF4-203ENST00000488937 U3KQK5 164 aa2.14□□□□□ -2.07
PRPF4-203ENST00000488937 PTPRGP23470 1445 aa2.14□□□□□ -2.07
PRPF4-203ENST00000488937 NUP98P52948 1817 aa2.14□□□□□ -2.07
PRPF4-203ENST00000488937 KIF26AQ9ULI4 1882 aaPredicted RBP2.14□□□□□ -2.07
PRPF4-203ENST00000488937 MYO10Q9HD67 2058 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 IGKV1D-37A0A075B6S9 117 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 TRAV5A0A0B4J249 113 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 IGKV1-9A0A0C4DH69 117 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 C19orf71A6NCJ1 209 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 A6NED7 52 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 J3QQQ9 107 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 LEPROTO15243 131 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 TPST1O60507 370 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 OR2H2O95918 312 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 CISD3P0C7P0 127 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 CRHBPP24387 322 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 RPL18Q07020 188 aaKnown RBP2.13□□□□□ -2.07
PRPF4-203ENST00000488937 ZNF816Q0VGE8 651 aaPredicted RBP2.13□□□□□ -2.07
PRPF4-203ENST00000488937 DNLZQ5SXM8 178 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 RASL11AQ6T310 242 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 SDIM1Q6ZPB5 146 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 PHF5AQ7RTV0 110 aaKnown RBP2.13□□□□□ -2.07
PRPF4-203ENST00000488937 GTSCR1Q86UQ5 136 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 OR8I2Q8N0Y5 310 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 ST20-AS1Q8NBB2 130 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 BORCS8Q96FH0 119 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 PLA2G2FQ9BZM2 168 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 OR8D2Q9GZM6 311 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 ERG28Q9UKR5 140 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 TRAPPC1Q9Y5R8 145 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 ICOSQ9Y6W8 199 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 TNS3Q68CZ2 1445 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 SBF1O95248 1867 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 LTBP4Q8N2S1 1624 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 MYH6P13533 1939 aa2.13□□□□□ -2.07
PRPF4-203ENST00000488937 PIK3C2AO00443 1686 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 FAM135AQ9P2D6 1515 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 KDM5BQ9UGL1 1544 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 TRPM6Q9BX84 2022 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 ARHGEF28Q8N1W1 1705 aaKnown RBP2.12□□□□□ -2.07
PRPF4-203ENST00000488937 SMG6Q86US8 1419 aaKnown RBP2.12□□□□□ -2.07
PRPF4-203ENST00000488937 TRAPPC8Q9Y2L5 1435 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 TRBV7-6A0A0J9YX20 115 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 TMEM212A6NML5 194 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 ATP6V1G2-DDX39BF2Z307 99 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 GABARAPH6UMI1 98 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 LY6HO94772 140 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 TSPAN19P0C672 248 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 SLC25A16P16260 332 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 NFYBP25208 207 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 RNASE4P34096 147 aaKnown RBP2.12□□□□□ -2.07
PRPF4-203ENST00000488937 HIST1H4AP62805 103 aaKnown RBP2.12□□□□□ -2.07
PRPF4-203ENST00000488937 EMX2Q04743 252 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 GLYATL3Q5SZD4 288 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 LCE3EQ5T5B0 92 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 HAGHLQ6PII5 290 aaPredicted RBP2.12□□□□□ -2.07
PRPF4-203ENST00000488937 ZNF322Q6U7Q0 402 aaPredicted RBP2.12□□□□□ -2.07
PRPF4-203ENST00000488937 Q6ZQT7 251 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 MSRB3Q8IXL7 192 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 TCTE3Q8IZS6 198 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 LINC00612Q8N6U2 182 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 TMEM105Q8N8V8 129 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 CNEP1R1Q8N9A8 125 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 UBALD1Q8TB05 177 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 STAG3L4Q8TBR4 150 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 KLF14Q8TD94 323 aaPredicted RBP2.12□□□□□ -2.07
PRPF4-203ENST00000488937 SMCR5Q8TEV8 140 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 RBPMSQ93062 196 aaKnown RBP2.12□□□□□ -2.07
PRPF4-203ENST00000488937 LXNQ9BS40 222 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 SMDT1Q9H4I9 107 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 RNF11Q9Y3C5 154 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 NCKAP5O14513 1909 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 ATG2AQ2TAZ0 1938 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 TRPM1Q7Z4N2 1603 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 BCL9LQ86UU0 1499 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 MRC2Q9UBG0 1479 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 TOPBP1Q92547 1522 aa2.12□□□□□ -2.07
PRPF4-203ENST00000488937 CCNB3Q8WWL7 1395 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 SPATA31E1Q6ZUB1 1445 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 C9orf170A2RU37 121 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 MEIS3P1A6NDR6 274 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 FABP5P3A8MUU1 101 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 H3BQ85 93 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 GGCTO75223 188 aaKnown RBP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms