RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 EVC2Q86UK5 1308 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 EIF3AQ14152 1382 aaKnown RBP0.01□□□□□ -2.41
SMC4-219ENST00000487747 RFX7Q2KHR2 1363 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 PIK3R4Q99570 1358 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 ANKRD30AQ9BXX3 1397 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 APCP25054 2843 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 FHAD1B1AJZ9 1412 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 KDM6AO15550 1401 aaPredicted RBP0.01□□□□□ -2.41
SMC4-219ENST00000487747 PTPRGP23470 1445 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 WRNQ14191 1432 aaPredicted RBP eCLIP0.01□□□□□ -2.41
SMC4-219ENST00000487747 FAM135BQ49AJ0 1406 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 RIC1Q4ADV7 1423 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 TNS3Q68CZ2 1445 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 UHRF1BP1Q6BDS2 1440 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 CASKIN1Q8WXD9 1431 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 NCOA2Q15596 1464 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 ARAP1Q96P48 1450 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 PRXQ9BXM0 1461 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 NLRP1Q9C000 1473 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 MBD5Q9P267 1494 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 RAPGEF2Q9Y4G8 1499 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 EPRSP07814 1512 aaKnown RBP0.01□□□□□ -2.41
SMC4-219ENST00000487747 HMGXB3Q12766 1538 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 MAP3K1Q13233 1512 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 CLASP1Q7Z460 1538 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 ASXL1Q8IXJ9 1541 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 NISCHQ9Y2I1 1504 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 NRKQ7Z2Y5 1582 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 LAMC3Q9Y6N6 1575 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 RIMBP3CA6NJZ7 1639 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 RIMBP3BA6NNM3 1639 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 RIMBP3Q9UFD9 1639 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 TET3O43151 1660 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 KIAA1549Q9HCM3 1950 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 MED12Q93074 2177 aa0.01□□□□□ -2.41
SMC4-219ENST00000487747 TRBV6-8A0A0A6YYG3 113 aa0□□□□□ -2.41
SMC4-219ENST00000487747 TRAV12-1A0A0B4J245 112 aa0□□□□□ -2.41
SMC4-219ENST00000487747 LCE6AA0A183 80 aa0□□□□□ -2.41
SMC4-219ENST00000487747 CXorf51AA0A1B0GTR3 108 aa0□□□□□ -2.41
SMC4-219ENST00000487747 LINC00959A0A1B0GUT2 108 aa0□□□□□ -2.41
SMC4-219ENST00000487747 A0A1B0GV50 99 aa0□□□□□ -2.41
SMC4-219ENST00000487747 DUXBA0A1W2PPF3 345 aa0□□□□□ -2.41
SMC4-219ENST00000487747 TMEM189A5PLL7 270 aa0□□□□□ -2.41
SMC4-219ENST00000487747 TMEM210A6NLX4 147 aa0□□□□□ -2.41
SMC4-219ENST00000487747 A8MTW9 85 aa0□□□□□ -2.41
SMC4-219ENST00000487747 CLDN25C9JDP6 229 aa0□□□□□ -2.41
SMC4-219ENST00000487747 KCNK1O00180 336 aa0□□□□□ -2.41
SMC4-219ENST00000487747 ADGRB1O14514 1584 aa0□□□□□ -2.41
SMC4-219ENST00000487747 ARHGEF10O15013 1369 aa0□□□□□ -2.41
SMC4-219ENST00000487747 TECPR2O15040 1411 aa0□□□□□ -2.41
SMC4-219ENST00000487747 ARHGEF11O15085 1522 aa0□□□□□ -2.41
SMC4-219ENST00000487747 ABCC3O15438 1527 aa0□□□□□ -2.41
SMC4-219ENST00000487747 NUP155O75694 1391 aa0□□□□□ -2.41
SMC4-219ENST00000487747 CPDO75976 1380 aa0□□□□□ -2.41
SMC4-219ENST00000487747 SOGA1O94964 1423 aa0□□□□□ -2.41
SMC4-219ENST00000487747 UBL3O95164 117 aa0□□□□□ -2.41
SMC4-219ENST00000487747 IFNGP01579 166 aa0□□□□□ -2.41
SMC4-219ENST00000487747 MT1BP07438 61 aa0□□□□□ -2.41
SMC4-219ENST00000487747 LAMC1P11047 1609 aa0□□□□□ -2.41
SMC4-219ENST00000487747 CFTRP13569 1480 aa0□□□□□ -2.41
SMC4-219ENST00000487747 NEBP20929 6669 aa0□□□□□ -2.41
SMC4-219ENST00000487747 PTPRMP28827 1452 aa0□□□□□ -2.41
SMC4-219ENST00000487747 NKTRP30414 1462 aaKnown RBP0□□□□□ -2.41
SMC4-219ENST00000487747 CLIP1P30622 1438 aa0□□□□□ -2.41
SMC4-219ENST00000487747 CPS1P31327 1500 aa0□□□□□ -2.41
SMC4-219ENST00000487747 SSR2P43308 183 aa0□□□□□ -2.41
SMC4-219ENST00000487747 DAPK1P53355 1430 aa0□□□□□ -2.41
SMC4-219ENST00000487747 BLMP54132 1417 aaPredicted RBP0□□□□□ -2.41
SMC4-219ENST00000487747 MYOM2P54296 1465 aa0□□□□□ -2.41
SMC4-219ENST00000487747 FOXA3P55318 350 aaPredicted RBP0□□□□□ -2.41
SMC4-219ENST00000487747 YPEL3P61236 119 aaPredicted RBP0□□□□□ -2.41
SMC4-219ENST00000487747 MT1HP80294 61 aa0□□□□□ -2.41
SMC4-219ENST00000487747 DCDP81605 110 aaKnown RBP0□□□□□ -2.41
SMC4-219ENST00000487747 RHOGP84095 191 aa0□□□□□ -2.41
SMC4-219ENST00000487747 ERCC6Q03468 1493 aa0□□□□□ -2.41
SMC4-219ENST00000487747 ATP7AQ04656 1500 aa0□□□□□ -2.41
SMC4-219ENST00000487747 KIF1AQ12756 1690 aa0□□□□□ -2.41
SMC4-219ENST00000487747 TROQ12816 1431 aaPredicted RBP0□□□□□ -2.41
SMC4-219ENST00000487747 DIP2AQ14689 1571 aa0□□□□□ -2.41
SMC4-219ENST00000487747 MED1Q15648 1581 aaPredicted RBP0□□□□□ -2.41
SMC4-219ENST00000487747 NCOA1Q15788 1441 aa0□□□□□ -2.41
SMC4-219ENST00000487747 COQ5Q5HYK3 327 aa0□□□□□ -2.41
SMC4-219ENST00000487747 MTUS2Q5JR59 1369 aa0□□□□□ -2.41
SMC4-219ENST00000487747 C1orf137Q5JT78 98 aa0□□□□□ -2.41
SMC4-219ENST00000487747 IQSEC2Q5JU85 1478 aa0□□□□□ -2.41
SMC4-219ENST00000487747 ERICH3Q5RHP9 1530 aa0□□□□□ -2.41
SMC4-219ENST00000487747 SNAPC4Q5SXM2 1469 aa0□□□□□ -2.41
SMC4-219ENST00000487747 Q5XG85 94 aa0□□□□□ -2.41
SMC4-219ENST00000487747 FMN1Q68DA7 1419 aa0□□□□□ -2.41
SMC4-219ENST00000487747 PDPK2PQ6A1A2 396 aa0□□□□□ -2.41
SMC4-219ENST00000487747 PLB1Q6P1J6 1458 aa0□□□□□ -2.41
SMC4-219ENST00000487747 KRTAP26-1Q6PEX3 210 aa0□□□□□ -2.41
SMC4-219ENST00000487747 SOSTDC1Q6X4U4 206 aa0□□□□□ -2.41
SMC4-219ENST00000487747 LINC00322Q6ZN03 302 aaPredicted RBP0□□□□□ -2.41
SMC4-219ENST00000487747 LINC00299Q6ZSB3 139 aa0□□□□□ -2.41
SMC4-219ENST00000487747 MROH2BQ7Z745 1585 aa0□□□□□ -2.41
SMC4-219ENST00000487747 MAGI2Q86UL8 1455 aa0□□□□□ -2.41
SMC4-219ENST00000487747 OOSP2Q86WS3 158 aa0□□□□□ -2.41
SMC4-219ENST00000487747 TEX14Q8IWB6 1497 aa0□□□□□ -2.41
SMC4-219ENST00000487747 IQCF2Q8IXL9 164 aa0□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms