RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 NDUFA3O95167 84 aa8.81□□□□□ -1
SRGAP3-207ENST00000485983 NMBP08949 121 aa8.81□□□□□ -1
SRGAP3-207ENST00000485983 ATOH7Q8N100 152 aa8.81□□□□□ -1
SRGAP3-207ENST00000485983 SEPSECSQ9HD40 501 aaKnown RBP8.81□□□□□ -1
SRGAP3-207ENST00000485983 CYSLTR1Q9Y271 337 aa8.81□□□□□ -1
SRGAP3-207ENST00000485983 SLC25A15Q9Y619 301 aa8.81□□□□□ -1
SRGAP3-207ENST00000485983 TNS1Q9HBL0 1735 aaKnown RBP8.81□□□□□ -1
SRGAP3-207ENST00000485983 CD28P10747 220 aa8.81□□□□□ -1
SRGAP3-207ENST00000485983 PLPPR1Q8TBJ4 325 aa8.81□□□□□ -1
SRGAP3-207ENST00000485983 APOMO95445 188 aa8.81□□□□□ -1
SRGAP3-207ENST00000485983 VMO1Q7Z5L0 202 aa8.81□□□□□ -1
SRGAP3-207ENST00000485983 CST9LQ9H4G1 147 aa8.81□□□□□ -1
SRGAP3-207ENST00000485983 NTN3O00634 580 aaPredicted RBP8.8□□□□□ -1
SRGAP3-207ENST00000485983 COL11A1P12107 1806 aaPredicted RBP8.8□□□□□ -1
SRGAP3-207ENST00000485983 C15orf61A6NNL5 157 aa8.8□□□□□ -1
SRGAP3-207ENST00000485983 H3BUX3 64 aa8.8□□□□□ -1
SRGAP3-207ENST00000485983 RPL35AP18077 110 aaKnown RBP8.8□□□□□ -1
SRGAP3-207ENST00000485983 ST6GALNAC3Q8NDV1 305 aa8.8□□□□□ -1
SRGAP3-207ENST00000485983 JPT2Q9H910 190 aa8.8□□□□□ -1
SRGAP3-207ENST00000485983 SCO2A0A1W2PP80 73 aa8.8□□□□□ -1
SRGAP3-207ENST00000485983 DPRXA6NFQ7 191 aa8.8□□□□□ -1
SRGAP3-207ENST00000485983 SRSF1Q07955 248 aaKnown RBP eCLIP8.8□□□□□ -1
SRGAP3-207ENST00000485983 TEX38Q6PEX7 206 aa8.8□□□□□ -1
SRGAP3-207ENST00000485983 PUSL1Q8N0Z8 303 aaKnown RBP8.8□□□□□ -1
SRGAP3-207ENST00000485983 DEPPQ9NTK1 212 aa8.8□□□□□ -1
SRGAP3-207ENST00000485983 ATAD5Q96QE3 1844 aa8.8□□□□□ -1
SRGAP3-207ENST00000485983 NAT1P18440 290 aa8.8□□□□□ -1
SRGAP3-207ENST00000485983 Q71RC1 249 aaPredicted RBP8.8□□□□□ -1
SRGAP3-207ENST00000485983 TMEM219Q86XT9 240 aa8.8□□□□□ -1
SRGAP3-207ENST00000485983 LINC01356Q8N9X3 169 aa8.8□□□□□ -1
SRGAP3-207ENST00000485983 LINC00271P0C7V0 271 aa8.8□□□□□ -1
SRGAP3-207ENST00000485983 RCHY1Q96PM5 261 aa8.8□□□□□ -1
SRGAP3-207ENST00000485983 SPTBN1Q01082 2364 aaKnown RBP8.79□□□□□ -1
SRGAP3-207ENST00000485983 TRBV6-7A0A0A0MS04 114 aa8.79□□□□□ -1
SRGAP3-207ENST00000485983 HOXA3O43365 443 aaPredicted RBP8.79□□□□□ -1
SRGAP3-207ENST00000485983 RPL36AP83881 106 aaKnown RBP8.79□□□□□ -1
SRGAP3-207ENST00000485983 SP5Q6BEB4 398 aaPredicted RBP8.79□□□□□ -1
SRGAP3-207ENST00000485983 RPL36ALQ969Q0 106 aaKnown RBP8.79□□□□□ -1
SRGAP3-207ENST00000485983 PLSCR4Q9NRQ2 329 aa8.79□□□□□ -1
SRGAP3-207ENST00000485983 TGFBR3LH3BV60 316 aa8.79□□□□□ -1
SRGAP3-207ENST00000485983 LINC00158P58513 81 aa8.79□□□□□ -1
SRGAP3-207ENST00000485983 PIP4P2Q8N4L2 257 aa8.79□□□□□ -1
SRGAP3-207ENST00000485983 KLHL30-AS1Q8NEE0 82 aa8.79□□□□□ -1
SRGAP3-207ENST00000485983 C11orf68Q9H3H3 251 aaKnown RBP8.79□□□□□ -1
SRGAP3-207ENST00000485983 SLC17A3O00476 420 aa8.79□□□□□ -1
SRGAP3-207ENST00000485983 LCNL1Q6ZST4 164 aa8.79□□□□□ -1
SRGAP3-207ENST00000485983 PARD6GQ9BYG4 376 aaPredicted RBP8.79□□□□□ -1
SRGAP3-207ENST00000485983 SCN4AP35499 1836 aa8.79□□□□□ -1
SRGAP3-207ENST00000485983 SPSB3Q6PJ21 355 aa8.79□□□□□ -1
SRGAP3-207ENST00000485983 FAM89BQ8N5H3 189 aa8.79□□□□□ -1
SRGAP3-207ENST00000485983 WFDC12Q8WWY7 111 aa8.79□□□□□ -1
SRGAP3-207ENST00000485983 PSG8Q9UQ74 426 aa8.78□□□□□ -1
SRGAP3-207ENST00000485983 IGHV2-26A0A0B4J1V2 119 aa8.78□□□□□ -1
SRGAP3-207ENST00000485983 PLNP26678 52 aa8.78□□□□□ -1
SRGAP3-207ENST00000485983 FOXF2Q12947 444 aa8.78□□□□□ -1
SRGAP3-207ENST00000485983 ORMDL2Q53FV1 153 aa8.78□□□□□ -1
SRGAP3-207ENST00000485983 MORN3Q6PF18 240 aaPredicted RBP8.78□□□□□ -1
SRGAP3-207ENST00000485983 IZUMO1RA6ND01 250 aa8.78□□□□□ -1
SRGAP3-207ENST00000485983 PPBPP02775 128 aa8.78□□□□□ -1
SRGAP3-207ENST00000485983 ZNF497Q6ZNH5 498 aa8.78□□□□□ -1
SRGAP3-207ENST00000485983 TDRD15B5MCY1 1934 aaKnown RBP8.78□□□□□ -1
SRGAP3-207ENST00000485983 LRRC37AA6NMS7 1700 aa8.78□□□□□ -1
SRGAP3-207ENST00000485983 TRGV1A0A0A0MS02 117 aa8.78□□□□□ -1
SRGAP3-207ENST00000485983 LINC00587B1AMM8 73 aa8.78□□□□□ -1
SRGAP3-207ENST00000485983 H2BFSP57053 126 aa8.78□□□□□ -1
SRGAP3-207ENST00000485983 C15orf32Q32M92 178 aa8.78□□□□□ -1
SRGAP3-207ENST00000485983 MSRB2Q9Y3D2 182 aa8.78□□□□□ -1
SRGAP3-207ENST00000485983 LINC01549A6NIU2 74 aa8.78□□□□□ -1
SRGAP3-207ENST00000485983 F8WEM9 126 aa8.78□□□□□ -1
SRGAP3-207ENST00000485983 PRCDQ00LT1 54 aa8.78□□□□□ -1
SRGAP3-207ENST00000485983 GFI1BQ5VTD9 330 aa8.78□□□□□ -1
SRGAP3-207ENST00000485983 BRD3OSQ6XYD6 125 aa8.78□□□□□ -1
SRGAP3-207ENST00000485983 PEF1Q9UBV8 284 aaKnown RBP8.78□□□□□ -1
SRGAP3-207ENST00000485983 EPDR1Q9UM22 224 aa8.78□□□□□ -1
SRGAP3-207ENST00000485983 IGLV3-32A0A0A0MS00 114 aa8.77□□□□□ -1
SRGAP3-207ENST00000485983 HIGD1CA8MV81 97 aa8.77□□□□□ -1
SRGAP3-207ENST00000485983 CEACAM8P31997 349 aaPredicted RBP8.77□□□□□ -1
SRGAP3-207ENST00000485983 PAX2Q02962 417 aa8.77□□□□□ -1
SRGAP3-207ENST00000485983 F2Z2F3 143 aa8.77□□□□□ -1.01
SRGAP3-207ENST00000485983 TMEM95Q3KNT9 176 aa8.77□□□□□ -1.01
SRGAP3-207ENST00000485983 TRAV9-1A0A075B6T8 112 aa8.77□□□□□ -1.01
SRGAP3-207ENST00000485983 A0A1B0GWB2 263 aa8.77□□□□□ -1.01
SRGAP3-207ENST00000485983 ATP5G3P48201 142 aa8.77□□□□□ -1.01
SRGAP3-207ENST00000485983 MTURNQ8N3F0 131 aa8.77□□□□□ -1.01
SRGAP3-207ENST00000485983 BMPERQ8N8U9 685 aa8.77□□□□□ -1.01
SRGAP3-207ENST00000485983 OR2K2Q8NGT1 345 aa8.77□□□□□ -1.01
SRGAP3-207ENST00000485983 NEUROG3Q9Y4Z2 214 aa8.77□□□□□ -1.01
SRGAP3-207ENST00000485983 ABCA1O95477 2261 aa8.77□□□□□ -1.01
SRGAP3-207ENST00000485983 ATRXP46100 2492 aa8.77□□□□□ -1.01
SRGAP3-207ENST00000485983 J3QKU1 62 aa8.77□□□□□ -1.01
SRGAP3-207ENST00000485983 TYMSP04818 313 aa8.77□□□□□ -1.01
SRGAP3-207ENST00000485983 TPTE2P1Q5T6R2 138 aa8.77□□□□□ -1.01
SRGAP3-207ENST00000485983 FAM169BQ8N8A8 192 aa8.77□□□□□ -1.01
SRGAP3-207ENST00000485983 GTF3AQ92664 365 aaKnown RBP8.77□□□□□ -1.01
SRGAP3-207ENST00000485983 RNF5Q99942 180 aa8.77□□□□□ -1.01
SRGAP3-207ENST00000485983 ABCA7Q8IZY2 2146 aa8.76□□□□□ -1.01
SRGAP3-207ENST00000485983 MIA3Q5JRA6 1907 aa8.76□□□□□ -1.01
SRGAP3-207ENST00000485983 MYO16Q9Y6X6 1858 aa8.76□□□□□ -1.01
SRGAP3-207ENST00000485983 PINLYPA6NC86 204 aa8.76□□□□□ -1.01
SRGAP3-207ENST00000485983 USMG5Q96IX5 58 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms