RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 DIRC2Q96SL1 478 aa7.5□□□□□ -1.21
CALD1-220ENST00000482470 MUC3AQ02505 3323 aa7.49□□□□□ -1.21
CALD1-220ENST00000482470 CA1P00915 261 aaPredicted RBP7.49□□□□□ -1.21
CALD1-220ENST00000482470 CD33P20138 364 aa7.49□□□□□ -1.21
CALD1-220ENST00000482470 ZNF137PP52743 207 aa7.49□□□□□ -1.21
CALD1-220ENST00000482470 IBA57Q5T440 356 aaKnown RBP7.49□□□□□ -1.21
CALD1-220ENST00000482470 ZNF788Q6ZQV5 615 aa7.49□□□□□ -1.21
CALD1-220ENST00000482470 LINC01551Q86U37 167 aa7.49□□□□□ -1.21
CALD1-220ENST00000482470 OR2D3Q8NGH3 330 aa7.49□□□□□ -1.21
CALD1-220ENST00000482470 RAB1CQ92928 201 aa7.49□□□□□ -1.21
CALD1-220ENST00000482470 TXN2Q99757 166 aa7.49□□□□□ -1.21
CALD1-220ENST00000482470 VPS25Q9BRG1 176 aa7.49□□□□□ -1.21
CALD1-220ENST00000482470 ZNF586Q9NXT0 402 aa7.49□□□□□ -1.21
CALD1-220ENST00000482470 SIAH2O43255 324 aa7.49□□□□□ -1.21
CALD1-220ENST00000482470 DIAPH2-AS1Q14236 149 aa7.49□□□□□ -1.21
CALD1-220ENST00000482470 Q56UQ5 140 aa7.49□□□□□ -1.21
CALD1-220ENST00000482470 ASPHD1Q5U4P2 390 aa7.49□□□□□ -1.21
CALD1-220ENST00000482470 ASCL5Q7RTU5 278 aa7.49□□□□□ -1.21
CALD1-220ENST00000482470 TMEM144Q7Z5S9 345 aa7.49□□□□□ -1.21
CALD1-220ENST00000482470 OSR1Q8TAX0 266 aaPredicted RBP7.49□□□□□ -1.21
CALD1-220ENST00000482470 VN1R17PQ8TDU5 208 aa7.49□□□□□ -1.21
CALD1-220ENST00000482470 SNHG12Q9BXW3 62 aa7.49□□□□□ -1.21
CALD1-220ENST00000482470 RAB1BQ9H0U4 201 aa7.49□□□□□ -1.21
CALD1-220ENST00000482470 MRPL18Q9H0U6 180 aaKnown RBP7.49□□□□□ -1.21
CALD1-220ENST00000482470 ZNF430Q9H8G1 570 aaPredicted RBP7.49□□□□□ -1.21
CALD1-220ENST00000482470 PAM16Q9Y3D7 125 aa7.49□□□□□ -1.21
CALD1-220ENST00000482470 AMMECR1Q9Y4X0 333 aaPredicted RBP7.49□□□□□ -1.21
CALD1-220ENST00000482470 TM4SF5O14894 197 aa7.49□□□□□ -1.21
CALD1-220ENST00000482470 STAG3L2P0CL84 134 aa7.49□□□□□ -1.21
CALD1-220ENST00000482470 STAG3L3P0CL85 134 aa7.49□□□□□ -1.21
CALD1-220ENST00000482470 LOXL3P58215 753 aa7.49□□□□□ -1.21
CALD1-220ENST00000482470 AARDQ4LEZ3 155 aa7.49□□□□□ -1.21
CALD1-220ENST00000482470 TMEM186Q96B77 213 aa7.49□□□□□ -1.21
CALD1-220ENST00000482470 TNRC6AQ8NDV7 1962 aaKnown RBP7.48□□□□□ -1.21
CALD1-220ENST00000482470 A0A1B0GUS0 222 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 F2RL2O00254 374 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 CHEK1O14757 476 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 PROP1O75360 226 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 VENTXO95231 258 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 BRWD1-AS2P59051 145 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 HLA-DRB5Q30154 266 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 RNASEKQ6P5S7 137 aaKnown RBP7.48□□□□□ -1.21
CALD1-220ENST00000482470 LINC00305Q7Z4B0 112 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 HIST3H2BBQ8N257 126 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 AP1S3Q96PC3 154 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 HSPB9Q9BQS6 159 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 SCRT1Q9BWW7 348 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 ELOVL5Q9NYP7 299 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 YTHDF2Q9Y5A9 579 aaKnown RBP7.48□□□□□ -1.21
CALD1-220ENST00000482470 KIAA1549Q9HCM3 1950 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 COL5A1P20908 1838 aaPredicted RBP7.48□□□□□ -1.21
CALD1-220ENST00000482470 BOD1L1Q8NFC6 3051 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 IGHV3OR16-8A0A075B7F1 116 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 SRRM4A7MD48 611 aaKnown RBP7.48□□□□□ -1.21
CALD1-220ENST00000482470 APOBEC3AP31941 199 aaPredicted RBP7.48□□□□□ -1.21
CALD1-220ENST00000482470 MC5RP33032 325 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 PRCDQ00LT1 54 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 TMEM183AQ8IXX5 376 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 ZNF664Q8N3J9 261 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 ZNF114Q8NC26 417 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.48□□□□□ -1.21
CALD1-220ENST00000482470 HIST1H2BLQ99880 126 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 RASL11BQ9BPW5 248 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 GSX1Q9H4S2 264 aaPredicted RBP7.48□□□□□ -1.21
CALD1-220ENST00000482470 TRBV24-1A0A075B6N3 115 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 DLEU1O43261 78 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 HYPMO75409 117 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 CSN3P07498 182 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 ZCCHC14Q8WYQ9 949 aaKnown RBP7.48□□□□□ -1.21
CALD1-220ENST00000482470 TBX15Q96SF7 602 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 NAV3Q8IVL0 2385 aa7.48□□□□□ -1.21
CALD1-220ENST00000482470 TMSB15BA0A087X1C1 80 aa7.47□□□□□ -1.21
CALD1-220ENST00000482470 SERTM2A0A1B0GWG4 89 aa7.47□□□□□ -1.21
CALD1-220ENST00000482470 RAB4AP20338 218 aa7.47□□□□□ -1.21
CALD1-220ENST00000482470 COL8A2P25067 703 aa7.47□□□□□ -1.21
CALD1-220ENST00000482470 GNG5P63218 68 aa7.47□□□□□ -1.21
CALD1-220ENST00000482470 C19orf35Q6ZS72 473 aa7.47□□□□□ -1.21
CALD1-220ENST00000482470 LINC00479Q96M42 142 aa7.47□□□□□ -1.21
CALD1-220ENST00000482470 TMEM178BH3BS89 294 aa7.47□□□□□ -1.21
CALD1-220ENST00000482470 M0R143 59 aa7.47□□□□□ -1.21
CALD1-220ENST00000482470 C16orf54Q6UWD8 224 aa7.47□□□□□ -1.21
CALD1-220ENST00000482470 ERASQ7Z444 233 aa7.47□□□□□ -1.21
CALD1-220ENST00000482470 PERPQ96FX8 193 aa7.47□□□□□ -1.21
CALD1-220ENST00000482470 EAF1Q96JC9 268 aaPredicted RBP7.47□□□□□ -1.21
CALD1-220ENST00000482470 SLC25A33Q9BSK2 321 aa7.47□□□□□ -1.21
CALD1-220ENST00000482470 UBTD1Q9HAC8 227 aa7.47□□□□□ -1.21
CALD1-220ENST00000482470 RAXQ9Y2V3 346 aa7.47□□□□□ -1.21
CALD1-220ENST00000482470 GNG7O60262 68 aa7.47□□□□□ -1.21
CALD1-220ENST00000482470 VDAC2P45880 294 aaPredicted RBP7.47□□□□□ -1.21
CALD1-220ENST00000482470 PPOXP50336 477 aa7.47□□□□□ -1.21
CALD1-220ENST00000482470 CD69Q07108 199 aa7.47□□□□□ -1.21
CALD1-220ENST00000482470 IGFL2Q6UWQ7 119 aa7.47□□□□□ -1.21
CALD1-220ENST00000482470 OR52E5Q8NH55 327 aa7.47□□□□□ -1.21
CALD1-220ENST00000482470 TXNDC17Q9BRA2 123 aa7.47□□□□□ -1.21
CALD1-220ENST00000482470 WNT2P09544 360 aa7.46□□□□□ -1.21
CALD1-220ENST00000482470 MEF2CQ06413 473 aaPredicted RBP7.46□□□□□ -1.21
CALD1-220ENST00000482470 Q8TCH9 128 aa7.46□□□□□ -1.21
CALD1-220ENST00000482470 TMUB1Q9BVT8 246 aa7.46□□□□□ -1.21
CALD1-220ENST00000482470 FOXA2Q9Y261 457 aaPredicted RBP7.46□□□□□ -1.21
CALD1-220ENST00000482470 B9A039 149 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms