RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 FOXG1P55316 489 aaPredicted RBP8.68□□□□□ -1.02
SIK3-210ENST00000480468 VKORC1L1Q8N0U8 176 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 SLC25A45Q8N413 288 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 OR13A1Q8NGR1 328 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 ADTRPQ96IZ2 230 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 SLC25A2Q9BXI2 301 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 ZNF492Q9P255 531 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 RABAC1Q9UI14 185 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 CACNA1DQ01668 2161 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 FREM1Q5H8C1 2179 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 IGKV1OR2-108A0A075B7D4 117 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 IGHV3-43A0A0B4J1X8 118 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 RFPL3SP0C7P2 107 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 IGHV3-43DP0DP04 118 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 UQCRFS1P47985 274 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 FOXE3Q13461 319 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 WDR82Q6UXN9 313 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 FA2HQ7L5A8 372 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 FAM90A1Q86YD7 464 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 TSTD1Q8NFU3 115 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 OR4A5Q8NH83 315 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 NEU4Q8WWR8 484 aaPredicted RBP8.68□□□□□ -1.02
SIK3-210ENST00000480468 DDB2Q92466 427 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 ZNF714Q96N38 554 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 ZNF747Q9BV97 191 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 PLSCR4Q9NRQ2 329 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 JPT1Q9UK76 154 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 ZNF257Q9Y2Q1 563 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 KLF12Q9Y4X4 402 aa8.68□□□□□ -1.02
SIK3-210ENST00000480468 DEFB108AA8MXU0 73 aa8.67□□□□□ -1.02
SIK3-210ENST00000480468 FABP2P12104 132 aa8.67□□□□□ -1.02
SIK3-210ENST00000480468 RBPMS2Q6ZRY4 209 aaKnown RBP8.67□□□□□ -1.02
SIK3-210ENST00000480468 PLPPR2Q96GM1 343 aa8.67□□□□□ -1.02
SIK3-210ENST00000480468 COL25A1Q9BXS0 654 aaPredicted RBP8.67□□□□□ -1.02
SIK3-210ENST00000480468 AKIRIN1Q9H9L7 192 aaPredicted RBP8.67□□□□□ -1.02
SIK3-210ENST00000480468 A1L4Q6 167 aa8.66□□□□□ -1.02
SIK3-210ENST00000480468 SRRM4A7MD48 611 aaKnown RBP8.66□□□□□ -1.02
SIK3-210ENST00000480468 M0R296 226 aa8.66□□□□□ -1.02
SIK3-210ENST00000480468 FTH1P19P0C7X4 201 aa8.66□□□□□ -1.02
SIK3-210ENST00000480468 MYCNOSP40205 109 aa8.66□□□□□ -1.02
SIK3-210ENST00000480468 POU2AF1Q16633 256 aa8.66□□□□□ -1.02
SIK3-210ENST00000480468 ADAMTSL5Q6ZMM2 481 aa8.66□□□□□ -1.02
SIK3-210ENST00000480468 MLST8Q9BVC4 326 aa8.66□□□□□ -1.02
SIK3-210ENST00000480468 SMAD7O15105 426 aaKnown RBP8.66□□□□□ -1.02
SIK3-210ENST00000480468 LTBRP36941 435 aa8.66□□□□□ -1.02
SIK3-210ENST00000480468 GUSBP1Q15486 140 aa8.66□□□□□ -1.02
SIK3-210ENST00000480468 CD300EQ496F6 205 aaPredicted RBP8.66□□□□□ -1.02
SIK3-210ENST00000480468 C2orf83Q53S99 150 aa8.66□□□□□ -1.02
SIK3-210ENST00000480468 ACP7Q6ZNF0 438 aa8.66□□□□□ -1.02
SIK3-210ENST00000480468 FOXI2Q6ZQN5 318 aa8.66□□□□□ -1.02
SIK3-210ENST00000480468 TUSC5Q8IXB3 177 aa8.66□□□□□ -1.02
SIK3-210ENST00000480468 RFESDQ8TAC1 157 aa8.66□□□□□ -1.02
SIK3-210ENST00000480468 GTSF1Q8WW33 167 aa8.66□□□□□ -1.02
SIK3-210ENST00000480468 GPR82Q96P67 336 aa8.66□□□□□ -1.02
SIK3-210ENST00000480468 TMUB1Q9BVT8 246 aa8.66□□□□□ -1.02
SIK3-210ENST00000480468 PILRBQ9UKJ0 227 aa8.66□□□□□ -1.02
SIK3-210ENST00000480468 C19orf71A6NCJ1 209 aa8.65□□□□□ -1.02
SIK3-210ENST00000480468 IQCF6A8MYZ5 107 aa8.65□□□□□ -1.02
SIK3-210ENST00000480468 CER1O95813 267 aa8.65□□□□□ -1.02
SIK3-210ENST00000480468 CSN1S1P47710 185 aa8.65□□□□□ -1.02
SIK3-210ENST00000480468 SCGB2A2Q13296 93 aa8.65□□□□□ -1.02
SIK3-210ENST00000480468 ASPHD1Q5U4P2 390 aa8.65□□□□□ -1.02
SIK3-210ENST00000480468 NANOS1Q8WY41 292 aaKnown RBP8.65□□□□□ -1.02
SIK3-210ENST00000480468 PAXXQ9BUH6 204 aa8.65□□□□□ -1.02
SIK3-210ENST00000480468 AP5S1Q9NUS5 200 aa8.65□□□□□ -1.02
SIK3-210ENST00000480468 PRNDQ9UKY0 176 aa8.65□□□□□ -1.02
SIK3-210ENST00000480468 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.65□□□□□ -1.03
SIK3-210ENST00000480468 IGHV5-10-1A0A0J9YXX1 117 aa8.65□□□□□ -1.03
SIK3-210ENST00000480468 TEX48A0A1B0GUV7 120 aa8.65□□□□□ -1.03
SIK3-210ENST00000480468 J3QR89 54 aa8.65□□□□□ -1.03
SIK3-210ENST00000480468 HAX1O00165 279 aa8.65□□□□□ -1.03
SIK3-210ENST00000480468 CHEK1O14757 476 aa8.65□□□□□ -1.03
SIK3-210ENST00000480468 MGST3O14880 152 aa8.65□□□□□ -1.03
SIK3-210ENST00000480468 GOSR1O95249 250 aa8.65□□□□□ -1.03
SIK3-210ENST00000480468 GRPP07492 148 aa8.65□□□□□ -1.03
SIK3-210ENST00000480468 PRCDQ00LT1 54 aa8.65□□□□□ -1.03
SIK3-210ENST00000480468 TCTEX1D4Q5JR98 221 aa8.65□□□□□ -1.03
SIK3-210ENST00000480468 TIMM23BQ5SRD1 257 aa8.65□□□□□ -1.03
SIK3-210ENST00000480468 OR2Z1Q8NG97 314 aa8.65□□□□□ -1.03
SIK3-210ENST00000480468 FAM222BQ8WU58 562 aa8.65□□□□□ -1.03
SIK3-210ENST00000480468 SPATA25Q9BR10 227 aa8.65□□□□□ -1.03
SIK3-210ENST00000480468 MCRIP2Q9BUT9 160 aaKnown RBP8.65□□□□□ -1.03
SIK3-210ENST00000480468 IFI27L2Q9H2X8 130 aa8.65□□□□□ -1.03
SIK3-210ENST00000480468 GNG12Q9UBI6 72 aa8.65□□□□□ -1.03
SIK3-210ENST00000480468 VCANP13611 3396 aa8.64□□□□□ -1.03
SIK3-210ENST00000480468 SNAI2O43623 268 aa8.64□□□□□ -1.03
SIK3-210ENST00000480468 P01737 135 aa8.64□□□□□ -1.03
SIK3-210ENST00000480468 SMAGPQ0VAQ4 97 aa8.64□□□□□ -1.03
SIK3-210ENST00000480468 TBC1D28Q2M2D7 210 aa8.64□□□□□ -1.03
SIK3-210ENST00000480468 LGALS9BQ3B8N2 356 aa8.64□□□□□ -1.03
SIK3-210ENST00000480468 RPL39P5Q59GN2 51 aa8.64□□□□□ -1.03
SIK3-210ENST00000480468 LGALS9CQ6DKI2 356 aa8.64□□□□□ -1.03
SIK3-210ENST00000480468 C11orf53Q8IXP5 236 aa8.64□□□□□ -1.03
SIK3-210ENST00000480468 GATD1Q8NB37 220 aa8.64□□□□□ -1.03
SIK3-210ENST00000480468 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.64□□□□□ -1.03
SIK3-210ENST00000480468 OR1L4Q8NGR5 311 aa8.64□□□□□ -1.03
SIK3-210ENST00000480468 OR1L8Q8NGR8 309 aa8.64□□□□□ -1.03
SIK3-210ENST00000480468 CACNG8Q8WXS5 425 aa8.64□□□□□ -1.03
SIK3-210ENST00000480468 PERPQ96FX8 193 aa8.64□□□□□ -1.03
SIK3-210ENST00000480468 GTSF1LQ9H1H1 148 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms