RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 CCDC32Q9BV29 185 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 ZNF436Q9C0F3 470 aaPredicted RBP3.73□□□□□ -1.81
PTCD3-213ENST00000480102 SRRQ9GZT4 340 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 NAA60Q9H7X0 242 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 HRASLSQ9HDD0 168 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 BATF3Q9NR55 127 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.73□□□□□ -1.81
PTCD3-213ENST00000480102 C14orf166Q9Y224 244 aaKnown RBP3.73□□□□□ -1.81
PTCD3-213ENST00000480102 ZNF256Q9Y2P7 627 aaPredicted RBP3.73□□□□□ -1.81
PTCD3-213ENST00000480102 TMED3Q9Y3Q3 217 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 KIAA2026Q5HYC2 2103 aa3.73□□□□□ -1.81
PTCD3-213ENST00000480102 A0A0B4J293 547 aa3.72□□□□□ -1.81
PTCD3-213ENST00000480102 A0A1B0GU03 582 aa3.72□□□□□ -1.81
PTCD3-213ENST00000480102 DPPA5A6NC42 116 aa3.72□□□□□ -1.81
PTCD3-213ENST00000480102 C15orf62A8K5M9 175 aa3.72□□□□□ -1.81
PTCD3-213ENST00000480102 E7EUB6 86 aa3.72□□□□□ -1.81
PTCD3-213ENST00000480102 NDUFA4O00483 81 aa3.72□□□□□ -1.81
PTCD3-213ENST00000480102 TNFSF12O43508 249 aa3.72□□□□□ -1.81
PTCD3-213ENST00000480102 SCGB2A1O75556 95 aa3.72□□□□□ -1.81
PTCD3-213ENST00000480102 DEFA4P12838 97 aa3.72□□□□□ -1.81
PTCD3-213ENST00000480102 HTR2BP41595 481 aa3.72□□□□□ -1.81
PTCD3-213ENST00000480102 CCR6P51684 374 aa3.72□□□□□ -1.81
PTCD3-213ENST00000480102 RBMS2Q15434 407 aaKnown RBP3.72□□□□□ -1.81
PTCD3-213ENST00000480102 RPEL1Q2QD12 228 aa3.72□□□□□ -1.81
PTCD3-213ENST00000480102 FAM106AQ4KMX7 169 aa3.72□□□□□ -1.81
PTCD3-213ENST00000480102 C10orf55Q5SWW7 151 aa3.72□□□□□ -1.81
PTCD3-213ENST00000480102 LCN12Q6JVE5 192 aa3.72□□□□□ -1.81
PTCD3-213ENST00000480102 TOMM5Q8N4H5 51 aa3.72□□□□□ -1.81
PTCD3-213ENST00000480102 OR5T1Q8NG75 326 aa3.72□□□□□ -1.81
PTCD3-213ENST00000480102 OR51S1Q8NGJ8 323 aa3.72□□□□□ -1.81
PTCD3-213ENST00000480102 OR4A16Q8NH70 328 aa3.72□□□□□ -1.81
PTCD3-213ENST00000480102 OR10C1Q96KK4 312 aa3.72□□□□□ -1.81
PTCD3-213ENST00000480102 TP53RKQ96S44 253 aa3.72□□□□□ -1.81
PTCD3-213ENST00000480102 PALMDQ9NP74 551 aa3.72□□□□□ -1.81
PTCD3-213ENST00000480102 MRPL27Q9P0M9 148 aaKnown RBP3.72□□□□□ -1.81
PTCD3-213ENST00000480102 UFC1Q9Y3C8 167 aa3.72□□□□□ -1.81
PTCD3-213ENST00000480102 OR51B2Q9Y5P1 312 aa3.72□□□□□ -1.81
PTCD3-213ENST00000480102 U3KQ87 197 aa3.72□□□□□ -1.81
PTCD3-213ENST00000480102 HUWE1Q7Z6Z7 4374 aaKnown RBP3.72□□□□□ -1.81
PTCD3-213ENST00000480102 TRAV30A0A087WSZ9 112 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 TRAV2A0A0B4J234 112 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 CENPXA8MT69 81 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 I3L2K1 104 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 K7EIL1 84 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 K7EIM0 57 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 TGOLN2O43493 480 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 PITX3O75364 302 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 RBMXL2O75526 392 aaKnown RBP3.71□□□□□ -1.82
PTCD3-213ENST00000480102 IGKV1-5P01602 117 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 CSN3P07498 182 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 OR5AC1P0C628 307 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 OR13C7P0DN81 318 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 SLC25A4P12235 298 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 PGAM2P15259 253 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 AREGP15514 252 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 BMI1P35226 326 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 G6PCP35575 357 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 NPBWR1P48145 328 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 AKR1C2P52895 323 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 PPP5CP53041 499 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 KRTAP10-11P60412 298 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 SUPT4H1P63272 117 aaKnown RBP3.71□□□□□ -1.82
PTCD3-213ENST00000480102 RELQ04864 619 aaPredicted RBP3.71□□□□□ -1.82
PTCD3-213ENST00000480102 TMEM187Q14656 261 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 ANKRD55Q3KP44 614 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 PHLDA2Q53GA4 152 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 C2orf83Q53S99 150 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 ETFRF1Q6IPR1 90 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 SSX9Q7RTT3 188 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 LGI3Q8N145 548 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 TMEM116Q8NCL8 245 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 OR4X1Q8NH49 305 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 MARCH1Q8TCQ1 289 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 S100ZQ8WXG8 99 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 CACNG8Q8WXS5 425 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 TMEM190Q8WZ59 177 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 TMEM230Q96A57 120 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 MS4A10Q96PG2 267 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 CIB3Q96Q77 187 aaPredicted RBP3.71□□□□□ -1.82
PTCD3-213ENST00000480102 PDCD10Q9BUL8 212 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 PLEKHA3Q9HB20 300 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 DAZ1Q9NQZ3 744 aaKnown RBP3.71□□□□□ -1.82
PTCD3-213ENST00000480102 ZNF355PQ9NSJ1 428 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 C21orf62Q9NYP8 219 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 HSPB7Q9UBY9 170 aa3.71□□□□□ -1.82
PTCD3-213ENST00000480102 TET2Q6N021 2002 aaPredicted RBP3.7□□□□□ -1.82
PTCD3-213ENST00000480102 TRAV3A0A0B4J244 114 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 RPS10-NUDT3A0A1W2PQS6 291 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 TMEM213A2RRL7 107 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 MFSD2BA6NFX1 497 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 CCDC160A6NGH7 325 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 FNDC10F2Z333 226 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 J3QRK9 145 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 NUPL2O15504 423 aaKnown RBP3.7□□□□□ -1.82
PTCD3-213ENST00000480102 SAP30O75446 220 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 OR2J3O76001 311 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 NDUFB6O95139 128 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 NXPH3O95157 252 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 NDUFB8O95169 186 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 CFDP00746 253 aaPredicted RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms