RNA–Protein interactions for RNA: ENST00000479460.5

TRIM59-205, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-205ENST00000479460 MEIS3P1A6NDR6 274 aa13.79□□□□□ -0.2
TRIM59-205ENST00000479460 RFX2P48378 723 aa13.79□□□□□ -0.2
TRIM59-205ENST00000479460 PSMG4Q5JS54 123 aa13.79□□□□□ -0.2
TRIM59-205ENST00000479460 H2BFWTQ7Z2G1 175 aa13.79□□□□□ -0.2
TRIM59-205ENST00000479460 NARS2Q96I59 477 aaKnown RBP13.79□□□□□ -0.2
TRIM59-205ENST00000479460 NEU1Q99519 415 aa13.79□□□□□ -0.2
TRIM59-205ENST00000479460 FXYD6Q9H0Q3 95 aa13.79□□□□□ -0.2
TRIM59-205ENST00000479460 DIABLOQ9NR28 239 aa13.79□□□□□ -0.2
TRIM59-205ENST00000479460 XCL2Q9UBD3 114 aa13.79□□□□□ -0.2
TRIM59-205ENST00000479460 TMEM189A5PLL7 270 aa13.78□□□□□ -0.2
TRIM59-205ENST00000479460 HELTA6NFD8 242 aa13.78□□□□□ -0.2
TRIM59-205ENST00000479460 EIF2B2P49770 351 aaKnown RBP13.78□□□□□ -0.2
TRIM59-205ENST00000479460 PPP5CP53041 499 aa13.78□□□□□ -0.2
TRIM59-205ENST00000479460 DHRS2Q13268 280 aa13.78□□□□□ -0.2
TRIM59-205ENST00000479460 IFT46Q9NQC8 304 aa13.78□□□□□ -0.2
TRIM59-205ENST00000479460 BLOC1S6Q9UL45 172 aa13.78□□□□□ -0.2
TRIM59-205ENST00000479460 ZNF705AQ6ZN79 300 aaPredicted RBP13.77□□□□□ -0.21
TRIM59-205ENST00000479460 CORTO00230 105 aa13.76□□□□□ -0.21
TRIM59-205ENST00000479460 CLN5O75503 358 aa13.76□□□□□ -0.21
TRIM59-205ENST00000479460 IGKV1-39P01597 117 aa13.76□□□□□ -0.21
TRIM59-205ENST00000479460 IGKV1D-39P04432 117 aa13.76□□□□□ -0.21
TRIM59-205ENST00000479460 SDC2P34741 201 aa13.76□□□□□ -0.21
TRIM59-205ENST00000479460 SNCAP37840 140 aa13.76□□□□□ -0.21
TRIM59-205ENST00000479460 Q8N1X5 172 aa13.76□□□□□ -0.21
TRIM59-205ENST00000479460 ANAPC10Q9UM13 185 aa13.76□□□□□ -0.21
TRIM59-205ENST00000479460 TEX48A0A1B0GUV7 120 aa13.75□□□□□ -0.21
TRIM59-205ENST00000479460 SMIM9A6NGZ8 99 aa13.75□□□□□ -0.21
TRIM59-205ENST00000479460 ZNF705FA8MVS1 300 aaPredicted RBP13.75□□□□□ -0.21
TRIM59-205ENST00000479460 INS-IGF2F8WCM5 200 aa13.75□□□□□ -0.21
TRIM59-205ENST00000479460 H3BMM0 161 aa13.75□□□□□ -0.21
TRIM59-205ENST00000479460 SCGB2A1O75556 95 aa13.75□□□□□ -0.21
TRIM59-205ENST00000479460 PMP2P02689 132 aa13.75□□□□□ -0.21
TRIM59-205ENST00000479460 ZNF705DP0CH99 300 aaPredicted RBP13.75□□□□□ -0.21
TRIM59-205ENST00000479460 ZNF705BP0CI00 300 aaPredicted RBP13.75□□□□□ -0.21
TRIM59-205ENST00000479460 AP2S1P53680 142 aaPredicted RBP13.75□□□□□ -0.21
TRIM59-205ENST00000479460 TNP2Q05952 138 aa13.75□□□□□ -0.21
TRIM59-205ENST00000479460 PHLDA2Q53GA4 152 aa13.75□□□□□ -0.21
TRIM59-205ENST00000479460 SPINK9Q5DT21 86 aa13.75□□□□□ -0.21
TRIM59-205ENST00000479460 TMEM230Q96A57 120 aa13.75□□□□□ -0.21
TRIM59-205ENST00000479460 SSR3Q9UNL2 185 aa13.75□□□□□ -0.21
TRIM59-205ENST00000479460 U3KQE9 123 aa13.75□□□□□ -0.21
TRIM59-205ENST00000479460 HERC1Q15751 4861 aa13.75□□□□□ -0.21
TRIM59-205ENST00000479460 CLEC2LP0C7M8 214 aa13.74□□□□□ -0.21
TRIM59-205ENST00000479460 S100GP29377 79 aa13.74□□□□□ -0.21
TRIM59-205ENST00000479460 EMP1P54849 157 aa13.74□□□□□ -0.21
TRIM59-205ENST00000479460 TAS2R46P59540 309 aa13.74□□□□□ -0.21
TRIM59-205ENST00000479460 SNRPD3P62318 126 aaKnown RBP13.74□□□□□ -0.21
TRIM59-205ENST00000479460 IDNKQ5T6J7 187 aa13.74□□□□□ -0.21
TRIM59-205ENST00000479460 OR5H2Q8NGV7 314 aa13.74□□□□□ -0.21
TRIM59-205ENST00000479460 OR6F1Q8NGZ6 308 aa13.74□□□□□ -0.21
TRIM59-205ENST00000479460 OR4X1Q8NH49 305 aa13.74□□□□□ -0.21
TRIM59-205ENST00000479460 GLMPQ8WWB7 406 aa13.74□□□□□ -0.21
TRIM59-205ENST00000479460 NRG4Q8WWG1 115 aa13.74□□□□□ -0.21
TRIM59-205ENST00000479460 MRGPRFQ96AM1 343 aa13.74□□□□□ -0.21
TRIM59-205ENST00000479460 NIPSNAP3BQ9BS92 247 aa13.74□□□□□ -0.21
TRIM59-205ENST00000479460 SEPSECSQ9HD40 501 aaKnown RBP13.74□□□□□ -0.21
TRIM59-205ENST00000479460 MRPL36Q9P0J6 103 aaKnown RBP13.74□□□□□ -0.21
TRIM59-205ENST00000479460 DKK2Q9UBU2 259 aa13.74□□□□□ -0.21
TRIM59-205ENST00000479460 NAT1P18440 290 aa13.73□□□□□ -0.21
TRIM59-205ENST00000479460 SUB1P53999 127 aaKnown RBP eCLIP13.73□□□□□ -0.21
TRIM59-205ENST00000479460 FAM3BP58499 235 aaPredicted RBP13.73□□□□□ -0.21
TRIM59-205ENST00000479460 MXD1Q05195 221 aa13.73□□□□□ -0.21
TRIM59-205ENST00000479460 C16orf54Q6UWD8 224 aa13.73□□□□□ -0.21
TRIM59-205ENST00000479460 TBC1D26Q86UD7 250 aa13.73□□□□□ -0.21
TRIM59-205ENST00000479460 FNDC4Q9H6D8 234 aaPredicted RBP13.73□□□□□ -0.21
TRIM59-205ENST00000479460 RNF167Q9H6Y7 350 aa13.73□□□□□ -0.21
TRIM59-205ENST00000479460 RFNGQ9Y644 331 aa13.73□□□□□ -0.21
TRIM59-205ENST00000479460 APOBP04114 4563 aaKnown RBP13.73□□□□□ -0.21
TRIM59-205ENST00000479460 FAM90A26D6RGX4 464 aa13.72□□□□□ -0.21
TRIM59-205ENST00000479460 IGKV1-17P01599 117 aa13.72□□□□□ -0.21
TRIM59-205ENST00000479460 RNASE2P10153 161 aaKnown RBP13.72□□□□□ -0.21
TRIM59-205ENST00000479460 HLA-DRB4P13762 266 aa13.72□□□□□ -0.21
TRIM59-205ENST00000479460 OXA1LQ15070 435 aa13.72□□□□□ -0.21
TRIM59-205ENST00000479460 LPCAT3Q6P1A2 487 aa13.72□□□□□ -0.21
TRIM59-205ENST00000479460 SLC35G3Q8N808 338 aa13.72□□□□□ -0.21
TRIM59-205ENST00000479460 HLA-DRB4X5D2U9 266 aa13.72□□□□□ -0.21
TRIM59-205ENST00000479460 HNRNPCP07910 306 aaKnown RBP eCLIP13.71□□□□□ -0.21
TRIM59-205ENST00000479460 PSMB9P28065 219 aa13.71□□□□□ -0.21
TRIM59-205ENST00000479460 OPRK1P41145 380 aa13.71□□□□□ -0.21
TRIM59-205ENST00000479460 TIGITQ495A1 244 aa13.71□□□□□ -0.21
TRIM59-205ENST00000479460 FAM222AQ5U5X8 452 aa13.71□□□□□ -0.21
TRIM59-205ENST00000479460 TRAV30A0A087WSZ9 112 aa13.7□□□□□ -0.22
TRIM59-205ENST00000479460 HTN3P15516 51 aa13.7□□□□□ -0.22
TRIM59-205ENST00000479460 RPL5P46777 297 aaKnown RBP13.7□□□□□ -0.22
TRIM59-205ENST00000479460 IZUMO4Q1ZYL8 232 aa13.7□□□□□ -0.22
TRIM59-205ENST00000479460 CNBD2Q96M20 576 aa13.7□□□□□ -0.22
TRIM59-205ENST00000479460 NRN1Q9NPD7 142 aa13.7□□□□□ -0.22
TRIM59-205ENST00000479460 TMED3Q9Y3Q3 217 aa13.7□□□□□ -0.22
TRIM59-205ENST00000479460 HRH1P35367 487 aa13.69□□□□□ -0.22
TRIM59-205ENST00000479460 GABARAPL2P60520 117 aa13.69□□□□□ -0.22
TRIM59-205ENST00000479460 MLANAQ16655 118 aa13.69□□□□□ -0.22
TRIM59-205ENST00000479460 TMEM88Q6PEY1 159 aa13.69□□□□□ -0.22
TRIM59-205ENST00000479460 SCRT2Q9NQ03 307 aa13.69□□□□□ -0.22
TRIM59-205ENST00000479460 IGHV3OR16-12A0A075B7B8 117 aa13.68□□□□□ -0.22
TRIM59-205ENST00000479460 A0A0B4J293 547 aa13.68□□□□□ -0.22
TRIM59-205ENST00000479460 TMEM127O75204 238 aa13.68□□□□□ -0.22
TRIM59-205ENST00000479460 NKX2-1P43699 371 aaPredicted RBP13.68□□□□□ -0.22
TRIM59-205ENST00000479460 LYSMD2Q8IV50 215 aa13.68□□□□□ -0.22
TRIM59-205ENST00000479460 C6orf223Q8N319 242 aa13.68□□□□□ -0.22
TRIM59-205ENST00000479460 C15orf53Q8NAA6 179 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms