RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 C16orf54Q6UWD8 224 aa11.27□□□□□ -0.61
HPS4-210ENST00000473782 C8orf59Q8N0T1 100 aaPredicted RBP11.27□□□□□ -0.61
HPS4-210ENST00000473782 BEST4Q8NFU0 473 aa11.27□□□□□ -0.61
HPS4-210ENST00000473782 METTL26Q96S19 204 aa11.27□□□□□ -0.61
HPS4-210ENST00000473782 LRP1Q07954 4544 aaKnown RBP11.26□□□□□ -0.61
HPS4-210ENST00000473782 TRAV1-2A0A0B4J238 106 aa11.26□□□□□ -0.61
HPS4-210ENST00000473782 PGLYRP1O75594 196 aaPredicted RBP11.26□□□□□ -0.61
HPS4-210ENST00000473782 HSMCR30P0CW71 290 aa11.26□□□□□ -0.61
HPS4-210ENST00000473782 PSMA1P25786 263 aaKnown RBP11.26□□□□□ -0.61
HPS4-210ENST00000473782 DAD1P61803 113 aa11.26□□□□□ -0.61
HPS4-210ENST00000473782 FRZBQ92765 325 aa11.26□□□□□ -0.61
HPS4-210ENST00000473782 Q9H8V8 135 aa11.26□□□□□ -0.61
HPS4-210ENST00000473782 FKBP11Q9NYL4 201 aa11.26□□□□□ -0.61
HPS4-210ENST00000473782 DNAH8Q96JB1 4490 aa11.25□□□□□ -0.61
HPS4-210ENST00000473782 LOC102723971A0A1B0GUV8 181 aa11.25□□□□□ -0.61
HPS4-210ENST00000473782 IGKV1-17P01599 117 aa11.25□□□□□ -0.61
HPS4-210ENST00000473782 RLN1P04808 185 aa11.25□□□□□ -0.61
HPS4-210ENST00000473782 GNG2P59768 71 aa11.25□□□□□ -0.61
HPS4-210ENST00000473782 PRCDQ00LT1 54 aa11.25□□□□□ -0.61
HPS4-210ENST00000473782 MLANAQ16655 118 aa11.25□□□□□ -0.61
HPS4-210ENST00000473782 GSG1LQ6UXU4 331 aa11.25□□□□□ -0.61
HPS4-210ENST00000473782 TMEM17Q86X19 198 aa11.25□□□□□ -0.61
HPS4-210ENST00000473782 HOGA1Q86XE5 327 aa11.25□□□□□ -0.61
HPS4-210ENST00000473782 FNDC4Q9H6D8 234 aaPredicted RBP11.25□□□□□ -0.61
HPS4-210ENST00000473782 SEPSECSQ9HD40 501 aaKnown RBP11.25□□□□□ -0.61
HPS4-210ENST00000473782 IGKV3-20P01619 116 aa11.24□□□□□ -0.61
HPS4-210ENST00000473782 SMR3BP02814 79 aaPredicted RBP11.24□□□□□ -0.61
HPS4-210ENST00000473782 ARPC4P59998 168 aa11.24□□□□□ -0.61
HPS4-210ENST00000473782 DLK1P80370 383 aa11.24□□□□□ -0.61
HPS4-210ENST00000473782 MLLT11Q13015 90 aaPredicted RBP11.24□□□□□ -0.61
HPS4-210ENST00000473782 Q6ZRN7 208 aaPredicted RBP11.24□□□□□ -0.61
HPS4-210ENST00000473782 TPRA1Q86W33 373 aa11.24□□□□□ -0.61
HPS4-210ENST00000473782 ACOT13Q9NPJ3 140 aa11.24□□□□□ -0.61
HPS4-210ENST00000473782 RPS10-NUDT3A0A1W2PQS6 291 aa11.23□□□□□ -0.61
HPS4-210ENST00000473782 PDCD5O14737 125 aa11.23□□□□□ -0.61
HPS4-210ENST00000473782 NUDT3O95989 172 aa11.23□□□□□ -0.61
HPS4-210ENST00000473782 PRM2P04554 102 aa11.23□□□□□ -0.61
HPS4-210ENST00000473782 ALDH3B2P48448 385 aa11.23□□□□□ -0.61
HPS4-210ENST00000473782 KRTAP10-1P60331 282 aa11.23□□□□□ -0.61
HPS4-210ENST00000473782 SSX7Q7RTT5 188 aa11.23□□□□□ -0.61
HPS4-210ENST00000473782 LGALS14Q8TCE9 139 aa11.23□□□□□ -0.61
HPS4-210ENST00000473782 SLC35B3Q9H1N7 401 aa11.23□□□□□ -0.61
HPS4-210ENST00000473782 Q9H3A6 140 aa11.23□□□□□ -0.61
HPS4-210ENST00000473782 J3QL48 77 aa11.22□□□□□ -0.61
HPS4-210ENST00000473782 CLN5O75503 358 aa11.22□□□□□ -0.61
HPS4-210ENST00000473782 IGKV1-39P01597 117 aa11.22□□□□□ -0.61
HPS4-210ENST00000473782 IGKV1D-39P04432 117 aa11.22□□□□□ -0.61
HPS4-210ENST00000473782 FCER2P06734 321 aa11.22□□□□□ -0.61
HPS4-210ENST00000473782 RAB3BP20337 219 aa11.22□□□□□ -0.61
HPS4-210ENST00000473782 NKX2-1P43699 371 aaPredicted RBP11.22□□□□□ -0.61
HPS4-210ENST00000473782 CCL18P55774 89 aa11.22□□□□□ -0.61
HPS4-210ENST00000473782 SNRPD3P62318 126 aaKnown RBP11.22□□□□□ -0.61
HPS4-210ENST00000473782 SEC22AQ96IW7 307 aa11.22□□□□□ -0.61
HPS4-210ENST00000473782 CLUHP3Q96NS8 147 aa11.22□□□□□ -0.61
HPS4-210ENST00000473782 SMIM30A4D0T7 59 aa11.21□□□□□ -0.61
HPS4-210ENST00000473782 HBE1P02100 147 aa11.21□□□□□ -0.61
HPS4-210ENST00000473782 HSPE1P61604 102 aaKnown RBP11.21□□□□□ -0.61
HPS4-210ENST00000473782 TIGITQ495A1 244 aa11.21□□□□□ -0.61
HPS4-210ENST00000473782 SPINK9Q5DT21 86 aa11.21□□□□□ -0.61
HPS4-210ENST00000473782 PACRGLQ8N7B6 248 aa11.21□□□□□ -0.61
HPS4-210ENST00000473782 OR4X1Q8NH49 305 aa11.21□□□□□ -0.61
HPS4-210ENST00000473782 RNF141Q8WVD5 230 aa11.21□□□□□ -0.61
HPS4-210ENST00000473782 C17orf77Q96MU5 243 aa11.21□□□□□ -0.61
HPS4-210ENST00000473782 TSC22D3Q99576 134 aa11.21□□□□□ -0.61
HPS4-210ENST00000473782 SAV1Q9H4B6 383 aaPredicted RBP11.21□□□□□ -0.61
HPS4-210ENST00000473782 NRN1Q9NPD7 142 aa11.21□□□□□ -0.61
HPS4-210ENST00000473782 PGPEP1Q9NXJ5 209 aa11.21□□□□□ -0.61
HPS4-210ENST00000473782 CASQ2O14958 399 aaPredicted RBP11.2□□□□□ -0.62
HPS4-210ENST00000473782 AP2S1P53680 142 aaPredicted RBP11.2□□□□□ -0.62
HPS4-210ENST00000473782 C10orf67Q8IYJ2 551 aa11.2□□□□□ -0.62
HPS4-210ENST00000473782 TMEM230Q96A57 120 aa11.2□□□□□ -0.62
HPS4-210ENST00000473782 MGLLQ99685 303 aa11.2□□□□□ -0.62
HPS4-210ENST00000473782 PLAC8L1A1L4L8 177 aa11.19□□□□□ -0.62
HPS4-210ENST00000473782 INS-IGF2F8WCM5 200 aa11.19□□□□□ -0.62
HPS4-210ENST00000473782 RNASE2P10153 161 aaKnown RBP11.19□□□□□ -0.62
HPS4-210ENST00000473782 ERHP84090 104 aaKnown RBP11.19□□□□□ -0.62
HPS4-210ENST00000473782 ZNF79Q15937 498 aa11.19□□□□□ -0.62
HPS4-210ENST00000473782 RRN3P1Q2M238 152 aa11.19□□□□□ -0.62
HPS4-210ENST00000473782 DHRS11Q6UWP2 260 aa11.19□□□□□ -0.62
HPS4-210ENST00000473782 DUSP21Q9H596 190 aa11.19□□□□□ -0.62
HPS4-210ENST00000473782 FAT3Q8TDW7 4589 aa11.18□□□□□ -0.62
HPS4-210ENST00000473782 F5H768 121 aa11.18□□□□□ -0.62
HPS4-210ENST00000473782 BUB3O43684 328 aa11.18□□□□□ -0.62
HPS4-210ENST00000473782 HNRNPCP07910 306 aaKnown RBP eCLIP11.18□□□□□ -0.62
HPS4-210ENST00000473782 HOXA1P49639 335 aaPredicted RBP11.18□□□□□ -0.62
HPS4-210ENST00000473782 EIF2B2P49770 351 aaKnown RBP11.18□□□□□ -0.62
HPS4-210ENST00000473782 USF2Q15853 346 aaPredicted RBP11.18□□□□□ -0.62
HPS4-210ENST00000473782 IZUMO4Q1ZYL8 232 aa11.18□□□□□ -0.62
HPS4-210ENST00000473782 OR5AP2Q8NGF4 316 aa11.18□□□□□ -0.62
HPS4-210ENST00000473782 NARS2Q96I59 477 aaKnown RBP11.18□□□□□ -0.62
HPS4-210ENST00000473782 WDR12Q9GZL7 423 aaKnown RBP11.18□□□□□ -0.62
HPS4-210ENST00000473782 CCDC90BQ9GZT6 254 aa11.18□□□□□ -0.62
HPS4-210ENST00000473782 GOLT1BQ9Y3E0 138 aa11.18□□□□□ -0.62
HPS4-210ENST00000473782 A0A1W2PPQ1 181 aa11.17□□□□□ -0.62
HPS4-210ENST00000473782 FCN2Q15485 313 aa11.17□□□□□ -0.62
HPS4-210ENST00000473782 TTC32Q5I0X7 151 aa11.17□□□□□ -0.62
HPS4-210ENST00000473782 FOXI2Q6ZQN5 318 aa11.17□□□□□ -0.62
HPS4-210ENST00000473782 OR4A16Q8NH70 328 aa11.17□□□□□ -0.62
HPS4-210ENST00000473782 C8orf4Q9NR00 106 aa11.17□□□□□ -0.62
HPS4-210ENST00000473782 TRAV18A0A075B6X5 111 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms