RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 PPYP01298 95 aa8.34□□□□□ -1.07
LSM2-209ENST00000470083 CALRP27797 417 aaKnown RBP8.34□□□□□ -1.07
LSM2-209ENST00000470083 FCGR2CP31995 323 aa8.34□□□□□ -1.07
LSM2-209ENST00000470083 FUSP35637 526 aaKnown RBP eCLIP8.34□□□□□ -1.07
LSM2-209ENST00000470083 PPP5CP53041 499 aa8.34□□□□□ -1.07
LSM2-209ENST00000470083 AP2S1P53680 142 aaPredicted RBP8.34□□□□□ -1.07
LSM2-209ENST00000470083 FXYD7P58549 80 aa8.34□□□□□ -1.07
LSM2-209ENST00000470083 KRTAP10-1P60331 282 aa8.34□□□□□ -1.07
LSM2-209ENST00000470083 CLINT1Q14677 625 aa8.34□□□□□ -1.07
LSM2-209ENST00000470083 ICAM4Q14773 271 aa8.34□□□□□ -1.07
LSM2-209ENST00000470083 SPHARQ15513 63 aa8.34□□□□□ -1.07
LSM2-209ENST00000470083 RRN3P1Q2M238 152 aa8.34□□□□□ -1.07
LSM2-209ENST00000470083 TPRA1Q86W33 373 aa8.34□□□□□ -1.07
LSM2-209ENST00000470083 ZNF709Q8N972 641 aa8.34□□□□□ -1.07
LSM2-209ENST00000470083 NUDCD2Q8WVJ2 157 aa8.34□□□□□ -1.07
LSM2-209ENST00000470083 LSM2Q9Y333 95 aaKnown RBP8.34□□□□□ -1.07
LSM2-209ENST00000470083 GOLT1BQ9Y3E0 138 aa8.34□□□□□ -1.07
LSM2-209ENST00000470083 KRASP01116 189 aa8.33□□□□□ -1.08
LSM2-209ENST00000470083 NKX2-1P43699 371 aaPredicted RBP8.33□□□□□ -1.08
LSM2-209ENST00000470083 C4orf48Q5BLP8 95 aa8.33□□□□□ -1.08
LSM2-209ENST00000470083 LAIR2Q6ISS4 152 aa8.33□□□□□ -1.08
LSM2-209ENST00000470083 ZNF818PQ6ZRF7 136 aa8.33□□□□□ -1.08
LSM2-209ENST00000470083 GLMPQ8WWB7 406 aa8.33□□□□□ -1.08
LSM2-209ENST00000470083 CYGBQ8WWM9 190 aa8.33□□□□□ -1.08
LSM2-209ENST00000470083 UFD1Q92890 307 aa8.33□□□□□ -1.08
LSM2-209ENST00000470083 PLCXD1Q9NUJ7 323 aa8.33□□□□□ -1.08
LSM2-209ENST00000470083 FKBP14Q9NWM8 211 aa8.33□□□□□ -1.08
LSM2-209ENST00000470083 U3KQE9 123 aa8.33□□□□□ -1.08
LSM2-209ENST00000470083 TMEM235A6NFC5 223 aa8.32□□□□□ -1.08
LSM2-209ENST00000470083 IFITM5A6NNB3 132 aa8.32□□□□□ -1.08
LSM2-209ENST00000470083 F5H768 121 aa8.32□□□□□ -1.08
LSM2-209ENST00000470083 IGKV3-20P01619 116 aa8.32□□□□□ -1.08
LSM2-209ENST00000470083 F2RP25116 425 aa8.32□□□□□ -1.08
LSM2-209ENST00000470083 G6PCP35575 357 aa8.32□□□□□ -1.08
LSM2-209ENST00000470083 RPS25P62851 125 aaKnown RBP8.32□□□□□ -1.08
LSM2-209ENST00000470083 TRAM1Q15629 374 aa8.32□□□□□ -1.08
LSM2-209ENST00000470083 C16orf54Q6UWD8 224 aa8.32□□□□□ -1.08
LSM2-209ENST00000470083 Q6ZRN7 208 aaPredicted RBP8.32□□□□□ -1.08
LSM2-209ENST00000470083 C1orf158Q8N1D5 194 aa8.32□□□□□ -1.08
LSM2-209ENST00000470083 RNF141Q8WVD5 230 aa8.32□□□□□ -1.08
LSM2-209ENST00000470083 FCAMRQ8WWV6 532 aa8.32□□□□□ -1.08
LSM2-209ENST00000470083 CLUHP3Q96NS8 147 aa8.32□□□□□ -1.08
LSM2-209ENST00000470083 TSC22D3Q99576 134 aa8.32□□□□□ -1.08
LSM2-209ENST00000470083 C7orf50Q9BRJ6 194 aaKnown RBP8.32□□□□□ -1.08
LSM2-209ENST00000470083 ATG5Q9H1Y0 275 aa8.32□□□□□ -1.08
LSM2-209ENST00000470083 NRN1Q9NPD7 142 aa8.32□□□□□ -1.08
LSM2-209ENST00000470083 LYRM9A8MSI8 78 aa8.31□□□□□ -1.08
LSM2-209ENST00000470083 EREGO14944 169 aa8.31□□□□□ -1.08
LSM2-209ENST00000470083 SSX5O60225 188 aa8.31□□□□□ -1.08
LSM2-209ENST00000470083 IFNA5P01569 189 aa8.31□□□□□ -1.08
LSM2-209ENST00000470083 PSMA1P25786 263 aaKnown RBP8.31□□□□□ -1.08
LSM2-209ENST00000470083 OR10A3P58181 314 aa8.31□□□□□ -1.08
LSM2-209ENST00000470083 FXYD4P59646 89 aa8.31□□□□□ -1.08
LSM2-209ENST00000470083 GNG2P59768 71 aa8.31□□□□□ -1.08
LSM2-209ENST00000470083 PRCDQ00LT1 54 aa8.31□□□□□ -1.08
LSM2-209ENST00000470083 GDF5OSQ5U4N7 250 aa8.31□□□□□ -1.08
LSM2-209ENST00000470083 UPK3BQ9BT76 320 aa8.31□□□□□ -1.08
LSM2-209ENST00000470083 ATP5HO75947 161 aa8.3□□□□□ -1.08
LSM2-209ENST00000470083 DEFB130BP0DP73 79 aa8.3□□□□□ -1.08
LSM2-209ENST00000470083 DEFB130AP0DP74 79 aa8.3□□□□□ -1.08
LSM2-209ENST00000470083 PTHLHP12272 177 aa8.3□□□□□ -1.08
LSM2-209ENST00000470083 LPAR6P43657 344 aa8.3□□□□□ -1.08
LSM2-209ENST00000470083 LINC00315P59091 139 aa8.3□□□□□ -1.08
LSM2-209ENST00000470083 TMEM17Q86X19 198 aa8.3□□□□□ -1.08
LSM2-209ENST00000470083 PQLC1Q8N2U9 271 aa8.3□□□□□ -1.08
LSM2-209ENST00000470083 BPIFB6Q8NFQ5 453 aa8.3□□□□□ -1.08
LSM2-209ENST00000470083 BEST4Q8NFU0 473 aa8.3□□□□□ -1.08
LSM2-209ENST00000470083 TMEM230Q96A57 120 aa8.3□□□□□ -1.08
LSM2-209ENST00000470083 SLC35B3Q9H1N7 401 aa8.3□□□□□ -1.08
LSM2-209ENST00000470083 SAV1Q9H4B6 383 aaPredicted RBP8.3□□□□□ -1.08
LSM2-209ENST00000470083 ZNF586Q9NXT0 402 aa8.3□□□□□ -1.08
LSM2-209ENST00000470083 PLA2G2DQ9UNK4 145 aa8.3□□□□□ -1.08
LSM2-209ENST00000470083 LRP1Q07954 4544 aaKnown RBP8.3□□□□□ -1.08
LSM2-209ENST00000470083 PDCD5O14737 125 aa8.29□□□□□ -1.08
LSM2-209ENST00000470083 CLN5O75503 358 aa8.29□□□□□ -1.08
LSM2-209ENST00000470083 SCGB2A1O75556 95 aa8.29□□□□□ -1.08
LSM2-209ENST00000470083 IGKV1-17P01599 117 aa8.29□□□□□ -1.08
LSM2-209ENST00000470083 RLN1P04808 185 aa8.29□□□□□ -1.08
LSM2-209ENST00000470083 ATP5G1P05496 136 aa8.29□□□□□ -1.08
LSM2-209ENST00000470083 ATP5G3P48201 142 aa8.29□□□□□ -1.08
LSM2-209ENST00000470083 DEFB1P60022 68 aa8.29□□□□□ -1.08
LSM2-209ENST00000470083 ERVFC1-1P60608 527 aa8.29□□□□□ -1.08
LSM2-209ENST00000470083 ERHP84090 104 aaKnown RBP8.29□□□□□ -1.08
LSM2-209ENST00000470083 FABP5Q01469 135 aa8.29□□□□□ -1.08
LSM2-209ENST00000470083 FOXI2Q6ZQN5 318 aa8.29□□□□□ -1.08
LSM2-209ENST00000470083 TSPAN14Q8NG11 270 aa8.29□□□□□ -1.08
LSM2-209ENST00000470083 LGALS14Q8TCE9 139 aa8.29□□□□□ -1.08
LSM2-209ENST00000470083 BORCS5Q969J3 196 aa8.29□□□□□ -1.08
LSM2-209ENST00000470083 CCDC90BQ9GZT6 254 aa8.29□□□□□ -1.08
LSM2-209ENST00000470083 MRPL36Q9P0J6 103 aaKnown RBP8.29□□□□□ -1.08
LSM2-209ENST00000470083 RNF213Q63HN8 5207 aa8.28□□□□□ -1.08
LSM2-209ENST00000470083 PGLYRP1O75594 196 aaPredicted RBP8.28□□□□□ -1.08
LSM2-209ENST00000470083 HNRNPCP07910 306 aaKnown RBP eCLIP8.28□□□□□ -1.08
LSM2-209ENST00000470083 PSG9Q00887 426 aa8.28□□□□□ -1.08
LSM2-209ENST00000470083 ZNF79Q15937 498 aa8.28□□□□□ -1.08
LSM2-209ENST00000470083 C8orf59Q8N0T1 100 aaPredicted RBP8.28□□□□□ -1.08
LSM2-209ENST00000470083 OR4B1Q8NGF8 309 aa8.28□□□□□ -1.08
LSM2-209ENST00000470083 OR4X1Q8NH49 305 aa8.28□□□□□ -1.08
LSM2-209ENST00000470083 MAGT1Q9H0U3 335 aa8.28□□□□□ -1.08
LSM2-209ENST00000470083 SCPEP1Q9HB40 452 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms