RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 CHAC1Q9BUX1 264 aa7.78□□□□□ -1.16
VPS26A-204ENST00000467852 PECRQ9BY49 303 aa7.78□□□□□ -1.16
VPS26A-204ENST00000467852 DCSTAMPQ9H295 470 aa7.78□□□□□ -1.16
VPS26A-204ENST00000467852 NDUFA4L2Q9NRX3 87 aa7.78□□□□□ -1.16
VPS26A-204ENST00000467852 NQO2P16083 231 aa7.77□□□□□ -1.17
VPS26A-204ENST00000467852 POLR2IP36954 125 aaKnown RBP7.77□□□□□ -1.17
VPS26A-204ENST00000467852 RORCP51449 518 aa7.77□□□□□ -1.17
VPS26A-204ENST00000467852 PPP5CP53041 499 aa7.77□□□□□ -1.17
VPS26A-204ENST00000467852 TAS2R31P59538 309 aa7.77□□□□□ -1.17
VPS26A-204ENST00000467852 DEFB1P60022 68 aa7.77□□□□□ -1.17
VPS26A-204ENST00000467852 C16orf54Q6UWD8 224 aa7.77□□□□□ -1.17
VPS26A-204ENST00000467852 TPRA1Q86W33 373 aa7.77□□□□□ -1.17
VPS26A-204ENST00000467852 DMBX1Q8NFW5 382 aa7.77□□□□□ -1.17
VPS26A-204ENST00000467852 TMEM230Q96A57 120 aa7.77□□□□□ -1.17
VPS26A-204ENST00000467852 PINX1Q96BK5 328 aaKnown RBP7.77□□□□□ -1.17
VPS26A-204ENST00000467852 TMEM56Q96MV1 263 aa7.77□□□□□ -1.17
VPS26A-204ENST00000467852 LINC00052Q96N35 136 aa7.77□□□□□ -1.17
VPS26A-204ENST00000467852 LPAR5Q9H1C0 372 aa7.77□□□□□ -1.17
VPS26A-204ENST00000467852 KCNK15Q9H427 330 aa7.77□□□□□ -1.17
VPS26A-204ENST00000467852 TMEM140Q9NV12 185 aa7.77□□□□□ -1.17
VPS26A-204ENST00000467852 TAS2R8Q9NYW2 309 aa7.77□□□□□ -1.17
VPS26A-204ENST00000467852 TIMM8BQ9Y5J9 83 aaPredicted RBP7.77□□□□□ -1.17
VPS26A-204ENST00000467852 LPAP08519 4548 aa7.76□□□□□ -1.17
VPS26A-204ENST00000467852 A0A096LPF7 62 aa7.76□□□□□ -1.17
VPS26A-204ENST00000467852 PLAC8L1A1L4L8 177 aa7.76□□□□□ -1.17
VPS26A-204ENST00000467852 SAC3D1A6NKF1 404 aa7.76□□□□□ -1.17
VPS26A-204ENST00000467852 TMEM14DPA8MWL7 114 aa7.76□□□□□ -1.17
VPS26A-204ENST00000467852 G3V2T6 193 aa7.76□□□□□ -1.17
VPS26A-204ENST00000467852 OGG1O15527 345 aa7.76□□□□□ -1.17
VPS26A-204ENST00000467852 IGLV2-14P01704 120 aa7.76□□□□□ -1.17
VPS26A-204ENST00000467852 FCGR3AP08637 254 aa7.76□□□□□ -1.17
VPS26A-204ENST00000467852 EVI2AP22794 236 aa7.76□□□□□ -1.17
VPS26A-204ENST00000467852 RASSF2P50749 326 aa7.76□□□□□ -1.17
VPS26A-204ENST00000467852 TMEM50BP56557 158 aa7.76□□□□□ -1.17
VPS26A-204ENST00000467852 ST3GAL4Q11206 333 aa7.76□□□□□ -1.17
VPS26A-204ENST00000467852 ASAH1Q13510 395 aa7.76□□□□□ -1.17
VPS26A-204ENST00000467852 ZNF79Q15937 498 aa7.76□□□□□ -1.17
VPS26A-204ENST00000467852 TMED4Q7Z7H5 227 aa7.76□□□□□ -1.17
VPS26A-204ENST00000467852 FAM89BQ8N5H3 189 aa7.76□□□□□ -1.17
VPS26A-204ENST00000467852 CIRBP-AS1Q8TBR5 109 aa7.76□□□□□ -1.17
VPS26A-204ENST00000467852 DPH3P1Q9H4G8 78 aa7.76□□□□□ -1.17
VPS26A-204ENST00000467852 TAGLN3Q9UI15 199 aa7.76□□□□□ -1.17
VPS26A-204ENST00000467852 OR2W1Q9Y3N9 320 aa7.76□□□□□ -1.17
VPS26A-204ENST00000467852 AQP12BA6NM10 295 aa7.75□□□□□ -1.17
VPS26A-204ENST00000467852 FKBP6O75344 327 aa7.75□□□□□ -1.17
VPS26A-204ENST00000467852 TMEM50AO95807 157 aa7.75□□□□□ -1.17
VPS26A-204ENST00000467852 HPRT1P00492 218 aa7.75□□□□□ -1.17
VPS26A-204ENST00000467852 HLA-DQB1P01920 261 aa7.75□□□□□ -1.17
VPS26A-204ENST00000467852 AZU1P20160 251 aa7.75□□□□□ -1.17
VPS26A-204ENST00000467852 HOXA5P20719 270 aa7.75□□□□□ -1.17
VPS26A-204ENST00000467852 RPS11P62280 158 aaKnown RBP eCLIP7.75□□□□□ -1.17
VPS26A-204ENST00000467852 SRSF3P84103 164 aaKnown RBP7.75□□□□□ -1.17
VPS26A-204ENST00000467852 POU2AF1Q16633 256 aa7.75□□□□□ -1.17
VPS26A-204ENST00000467852 FAM78BQ5VT40 261 aa7.75□□□□□ -1.17
VPS26A-204ENST00000467852 EBLN2Q6P2I7 272 aa7.75□□□□□ -1.17
VPS26A-204ENST00000467852 AQP12AQ8IXF9 295 aa7.75□□□□□ -1.17
VPS26A-204ENST00000467852 SPAG16Q8N0X2 631 aa7.75□□□□□ -1.17
VPS26A-204ENST00000467852 MAFIPQ8WZ33 124 aa7.75□□□□□ -1.17
VPS26A-204ENST00000467852 CIB1Q99828 191 aa7.75□□□□□ -1.17
VPS26A-204ENST00000467852 FOXI3A8MTJ6 420 aaPredicted RBP7.74□□□□□ -1.17
VPS26A-204ENST00000467852 ID1P41134 155 aa7.74□□□□□ -1.17
VPS26A-204ENST00000467852 PAX9P55771 341 aa7.74□□□□□ -1.17
VPS26A-204ENST00000467852 QRFPP83859 136 aa7.74□□□□□ -1.17
VPS26A-204ENST00000467852 EIF4EBP1Q13541 118 aaPredicted RBP7.74□□□□□ -1.17
VPS26A-204ENST00000467852 HSP90B2PQ58FF3 399 aa7.74□□□□□ -1.17
VPS26A-204ENST00000467852 TMPRSS11AQ6ZMR5 421 aa7.74□□□□□ -1.17
VPS26A-204ENST00000467852 LRTM2Q8N967 370 aa7.74□□□□□ -1.17
VPS26A-204ENST00000467852 NOP10Q9NPE3 64 aaKnown RBP7.74□□□□□ -1.17
VPS26A-204ENST00000467852 CLEC2DQ9UHP7 191 aa7.74□□□□□ -1.17
VPS26A-204ENST00000467852 OR51B2Q9Y5P1 312 aa7.74□□□□□ -1.17
VPS26A-204ENST00000467852 MARCH11A6NNE9 402 aa7.73□□□□□ -1.17
VPS26A-204ENST00000467852 MFNGO00587 321 aa7.73□□□□□ -1.17
VPS26A-204ENST00000467852 RBFOX2O43251 390 aaKnown RBP eCLIP7.73□□□□□ -1.17
VPS26A-204ENST00000467852 SCGB2A1O75556 95 aa7.73□□□□□ -1.17
VPS26A-204ENST00000467852 INSP01308 110 aa7.73□□□□□ -1.17
VPS26A-204ENST00000467852 C1orf100Q5SVJ3 147 aa7.73□□□□□ -1.17
VPS26A-204ENST00000467852 SIGLEC15Q6ZMC9 328 aa7.73□□□□□ -1.17
VPS26A-204ENST00000467852 COQ8AQ8NI60 647 aa7.73□□□□□ -1.17
VPS26A-204ENST00000467852 CCDC124Q96CT7 223 aaKnown RBP7.73□□□□□ -1.17
VPS26A-204ENST00000467852 C16orf74Q96GX8 76 aa7.73□□□□□ -1.17
VPS26A-204ENST00000467852 PGLYRP3Q96LB9 341 aa7.73□□□□□ -1.17
VPS26A-204ENST00000467852 DERL3Q96Q80 235 aa7.73□□□□□ -1.17
VPS26A-204ENST00000467852 LINC00467Q9BRT7 94 aa7.73□□□□□ -1.17
VPS26A-204ENST00000467852 GABARAPL3Q9BY60 117 aa7.73□□□□□ -1.17
VPS26A-204ENST00000467852 TRAV5A0A0B4J249 113 aa7.72□□□□□ -1.17
VPS26A-204ENST00000467852 IGLV2-11P01706 119 aa7.72□□□□□ -1.17
VPS26A-204ENST00000467852 HNRNPCP07910 306 aaKnown RBP eCLIP7.72□□□□□ -1.17
VPS26A-204ENST00000467852 LIMS3P0CW19 117 aa7.72□□□□□ -1.17
VPS26A-204ENST00000467852 LIMS4P0CW20 117 aa7.72□□□□□ -1.17
VPS26A-204ENST00000467852 NFYAP23511 347 aaPredicted RBP7.72□□□□□ -1.17
VPS26A-204ENST00000467852 CD300CQ08708 224 aa7.72□□□□□ -1.17
VPS26A-204ENST00000467852 C10orf126Q8N4M7 172 aa7.72□□□□□ -1.17
VPS26A-204ENST00000467852 BABAM2Q9NXR7 383 aa7.72□□□□□ -1.17
VPS26A-204ENST00000467852 ARL2BPQ9Y2Y0 163 aa7.72□□□□□ -1.17
VPS26A-204ENST00000467852 IGKV1D-13A0A0B4J2D9 117 aa7.71□□□□□ -1.18
VPS26A-204ENST00000467852 TNFSF12O43508 249 aa7.71□□□□□ -1.18
VPS26A-204ENST00000467852 IGKV1-13P0DP09 117 aa7.71□□□□□ -1.18
VPS26A-204ENST00000467852 NAT1P18440 290 aa7.71□□□□□ -1.18
VPS26A-204ENST00000467852 ERVK-16P61578 105 aa7.71□□□□□ -1.18
VPS26A-204ENST00000467852 PLAC9Q5JTB6 97 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms