RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 DHFR2Q86XF0 187 aa1.56□□□□□ -2.16
PRPF40A-205ENST00000467114 ZNF439Q8NDP4 499 aa1.56□□□□□ -2.16
PRPF40A-205ENST00000467114 OSTCQ9NRP0 149 aa1.56□□□□□ -2.16
PRPF40A-205ENST00000467114 CKLFQ9UBR5 152 aa1.56□□□□□ -2.16
PRPF40A-205ENST00000467114 KIF24Q5T7B8 1368 aa1.56□□□□□ -2.16
PRPF40A-205ENST00000467114 CACNA1GO43497 2377 aa1.56□□□□□ -2.16
PRPF40A-205ENST00000467114 NEO1Q92859 1461 aa1.56□□□□□ -2.16
PRPF40A-205ENST00000467114 CPAMD8Q8IZJ3 1885 aa1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 A0A0D9SG52 128 aa1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 C1orf196B1AJZ1 125 aa1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 IBA57-AS1B1ANH7 110 aa1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 TMEM238C9JI98 176 aa1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 E5RI56 91 aa1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 J3QRK9 145 aa1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 SDCBPO00560 298 aaPredicted RBP1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 IGKV1-16P04430 117 aa1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 HTR1AP08908 422 aa1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 GNG10P50151 68 aa1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 YPEL3P61236 119 aaPredicted RBP1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 ARHGAP11BQ3KRB8 267 aa1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 LINC01554Q52M75 96 aa1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 KHDC3LQ587J8 217 aa1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 LYRM7Q5U5X0 104 aa1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 C7orf65Q6ZTY9 151 aa1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 AAED1Q7RTV5 226 aa1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 C9orf163Q8N9P6 203 aa1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 OR5A1Q8NGJ0 315 aa1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 GPR146Q96CH1 333 aa1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 CST9LQ9H4G1 147 aa1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 GID8Q9NWU2 228 aa1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 UTP11Q9Y3A2 253 aaKnown RBP1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 BAHCC1Q9P281 2608 aa1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 SCN10AQ9Y5Y9 1956 aa1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 DOCK3Q8IZD9 2030 aa1.55□□□□□ -2.16
PRPF40A-205ENST00000467114 PLXNA3P51805 1871 aa1.54□□□□□ -2.16
PRPF40A-205ENST00000467114 TRBV19A0A075B6N1 114 aa1.54□□□□□ -2.16
PRPF40A-205ENST00000467114 ATG12O94817 140 aa1.54□□□□□ -2.16
PRPF40A-205ENST00000467114 OR5F1O95221 314 aa1.54□□□□□ -2.16
PRPF40A-205ENST00000467114 TCL1BO95988 128 aa1.54□□□□□ -2.16
PRPF40A-205ENST00000467114 C1QBP02746 253 aa1.54□□□□□ -2.16
PRPF40A-205ENST00000467114 CLPSP04118 112 aa1.54□□□□□ -2.16
PRPF40A-205ENST00000467114 GPX1P07203 203 aa1.54□□□□□ -2.16
PRPF40A-205ENST00000467114 UBBP0CG47 229 aa1.54□□□□□ -2.16
PRPF40A-205ENST00000467114 CRYGAP11844 174 aa1.54□□□□□ -2.16
PRPF40A-205ENST00000467114 ATP5G3P48201 142 aa1.54□□□□□ -2.16
PRPF40A-205ENST00000467114 VBP1P61758 197 aa1.54□□□□□ -2.16
PRPF40A-205ENST00000467114 ZNF345Q14585 488 aa1.54□□□□□ -2.16
PRPF40A-205ENST00000467114 POU6F1Q14863 301 aa1.54□□□□□ -2.16
PRPF40A-205ENST00000467114 KRTAP13-4Q3LI77 160 aa1.54□□□□□ -2.16
PRPF40A-205ENST00000467114 FAM173BQ6P4H8 233 aa1.54□□□□□ -2.16
PRPF40A-205ENST00000467114 SIGLECL1Q8N7X8 197 aa1.54□□□□□ -2.16
PRPF40A-205ENST00000467114 OR8D4Q8NGM9 314 aa1.54□□□□□ -2.16
PRPF40A-205ENST00000467114 FAM172AQ8WUF8 416 aa1.54□□□□□ -2.16
PRPF40A-205ENST00000467114 PRRT1Q99946 306 aa1.54□□□□□ -2.16
PRPF40A-205ENST00000467114 PYCARDQ9ULZ3 195 aa1.54□□□□□ -2.16
PRPF40A-205ENST00000467114 CCDC88AQ3V6T2 1871 aa1.54□□□□□ -2.16
PRPF40A-205ENST00000467114 A0A087X0T9 212 aa1.53□□□□□ -2.16
PRPF40A-205ENST00000467114 TRAV4A0A0B4J268 109 aa1.53□□□□□ -2.16
PRPF40A-205ENST00000467114 C19orf84I3L1E1 186 aa1.53□□□□□ -2.16
PRPF40A-205ENST00000467114 CYB5BO43169 146 aa1.53□□□□□ -2.16
PRPF40A-205ENST00000467114 IFNA1P01562 189 aa1.53□□□□□ -2.16
PRPF40A-205ENST00000467114 SRIP30626 198 aa1.53□□□□□ -2.16
PRPF40A-205ENST00000467114 PIGPP57054 158 aa1.53□□□□□ -2.16
PRPF40A-205ENST00000467114 RHOBP62745 196 aa1.53□□□□□ -2.16
PRPF40A-205ENST00000467114 EIF3AQ14152 1382 aaKnown RBP1.53□□□□□ -2.16
PRPF40A-205ENST00000467114 PCOTHQ58A44 107 aa1.53□□□□□ -2.16
PRPF40A-205ENST00000467114 Q6ZQT0 140 aa1.53□□□□□ -2.16
PRPF40A-205ENST00000467114 LYG2Q86SG7 212 aa1.53□□□□□ -2.16
PRPF40A-205ENST00000467114 COA5Q86WW8 74 aa1.53□□□□□ -2.16
PRPF40A-205ENST00000467114 OR4E2Q8NGC2 313 aa1.53□□□□□ -2.16
PRPF40A-205ENST00000467114 WFDC5Q8TCV5 224 aa1.53□□□□□ -2.16
PRPF40A-205ENST00000467114 TOPBP1Q92547 1522 aa1.53□□□□□ -2.16
PRPF40A-205ENST00000467114 RNF122Q9H9V4 155 aa1.53□□□□□ -2.16
PRPF40A-205ENST00000467114 LHFPL6Q9Y693 200 aa1.53□□□□□ -2.16
PRPF40A-205ENST00000467114 MDC1Q14676 2089 aaKnown RBP1.52□□□□□ -2.17
PRPF40A-205ENST00000467114 MYH11P35749 1972 aa1.52□□□□□ -2.17
PRPF40A-205ENST00000467114 CAMSAP1Q5T5Y3 1602 aa1.52□□□□□ -2.17
PRPF40A-205ENST00000467114 MEIKINA0A087WXM9 373 aa1.52□□□□□ -2.17
PRPF40A-205ENST00000467114 IFNA7P01567 189 aa1.52□□□□□ -2.17
PRPF40A-205ENST00000467114 OR4E1P0C645 316 aa1.52□□□□□ -2.17
PRPF40A-205ENST00000467114 NCALDP61601 193 aa1.52□□□□□ -2.17
PRPF40A-205ENST00000467114 RHEBQ15382 184 aa1.52□□□□□ -2.17
PRPF40A-205ENST00000467114 NNATQ16517 81 aa1.52□□□□□ -2.17
PRPF40A-205ENST00000467114 AKR1C8PQ5T2L2 129 aa1.52□□□□□ -2.17
PRPF40A-205ENST00000467114 DEFB128Q7Z7B8 93 aa1.52□□□□□ -2.17
PRPF40A-205ENST00000467114 STX12Q86Y82 276 aa1.52□□□□□ -2.17
PRPF40A-205ENST00000467114 LINC00471Q8N535 108 aa1.52□□□□□ -2.17
PRPF40A-205ENST00000467114 OR13C6PQ8NH95 151 aa1.52□□□□□ -2.17
PRPF40A-205ENST00000467114 NEK7Q8TDX7 302 aa1.52□□□□□ -2.17
PRPF40A-205ENST00000467114 YIPF3Q9GZM5 350 aa1.52□□□□□ -2.17
PRPF40A-205ENST00000467114 IMUPQ9GZP8 106 aa1.52□□□□□ -2.17
PRPF40A-205ENST00000467114 MED29Q9NX70 200 aa1.52□□□□□ -2.17
PRPF40A-205ENST00000467114 PRNDQ9UKY0 176 aa1.52□□□□□ -2.17
PRPF40A-205ENST00000467114 AMMECR1Q9Y4X0 333 aaPredicted RBP1.52□□□□□ -2.17
PRPF40A-205ENST00000467114 NUMA1Q14980 2115 aa1.51□□□□□ -2.17
PRPF40A-205ENST00000467114 G3V2T6 193 aa1.51□□□□□ -2.17
PRPF40A-205ENST00000467114 J3QKU1 62 aa1.51□□□□□ -2.17
PRPF40A-205ENST00000467114 NDUFC2O95298 119 aa1.51□□□□□ -2.17
PRPF40A-205ENST00000467114 CRPP02741 224 aa1.51□□□□□ -2.17
PRPF40A-205ENST00000467114 SHBGP04278 402 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms