RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 BORCS7-ASMTA0A0B4J1R7 106 aa2.32□□□□□ -2.04
USP25-207ENST00000464435 BUB1B-PAK6H3BSN5 160 aa2.32□□□□□ -2.04
USP25-207ENST00000464435 TAX1BP3O14907 124 aa2.32□□□□□ -2.04
USP25-207ENST00000464435 CREBL2O60519 120 aaPredicted RBP2.32□□□□□ -2.04
USP25-207ENST00000464435 C1QAP02745 245 aa2.32□□□□□ -2.04
USP25-207ENST00000464435 DBIP07108 87 aaKnown RBP2.32□□□□□ -2.04
USP25-207ENST00000464435 RPL7P18124 248 aaKnown RBP2.32□□□□□ -2.04
USP25-207ENST00000464435 POLR2HP52434 150 aaKnown RBP2.32□□□□□ -2.04
USP25-207ENST00000464435 EIF5AP63241 154 aaKnown RBP2.32□□□□□ -2.04
USP25-207ENST00000464435 NOXRED1Q6NXP6 359 aa2.32□□□□□ -2.04
USP25-207ENST00000464435 AGTRAPQ6RW13 159 aa2.32□□□□□ -2.04
USP25-207ENST00000464435 C2orf91Q6ZV80 131 aa2.32□□□□□ -2.04
USP25-207ENST00000464435 C10orf126Q8N4M7 172 aa2.32□□□□□ -2.04
USP25-207ENST00000464435 CLDND2Q8NHS1 167 aa2.32□□□□□ -2.04
USP25-207ENST00000464435 PPTC7Q8NI37 304 aa2.32□□□□□ -2.04
USP25-207ENST00000464435 MUC7Q8TAX7 377 aa2.32□□□□□ -2.04
USP25-207ENST00000464435 ADAT3Q96EY9 351 aaPredicted RBP2.32□□□□□ -2.04
USP25-207ENST00000464435 TM2D3Q9BRN9 247 aa2.32□□□□□ -2.04
USP25-207ENST00000464435 TMEM126AQ9H061 195 aa2.32□□□□□ -2.04
USP25-207ENST00000464435 TUBA4BQ9H853 241 aa2.32□□□□□ -2.04
USP25-207ENST00000464435 RNF122Q9H9V4 155 aa2.32□□□□□ -2.04
USP25-207ENST00000464435 CACYBPQ9HB71 228 aaKnown RBP2.32□□□□□ -2.04
USP25-207ENST00000464435 COPZ2Q9P299 210 aa2.32□□□□□ -2.04
USP25-207ENST00000464435 TRAPPC2LQ9UL33 140 aa2.32□□□□□ -2.04
USP25-207ENST00000464435 ZNF443Q9Y2A4 671 aaPredicted RBP2.32□□□□□ -2.04
USP25-207ENST00000464435 NUBP2Q9Y5Y2 271 aa2.32□□□□□ -2.04
USP25-207ENST00000464435 TECPR2O15040 1411 aa2.32□□□□□ -2.04
USP25-207ENST00000464435 DSCAMO60469 2012 aa2.32□□□□□ -2.04
USP25-207ENST00000464435 ERCC6Q03468 1493 aa2.32□□□□□ -2.04
USP25-207ENST00000464435 SIPA1L1O43166 1804 aa2.31□□□□□ -2.04
USP25-207ENST00000464435 TRAV36DV7A0A075B6V5 113 aa2.31□□□□□ -2.04
USP25-207ENST00000464435 A0A087X0T9 212 aa2.31□□□□□ -2.04
USP25-207ENST00000464435 IGKV2-24A0A0C4DH68 120 aa2.31□□□□□ -2.04
USP25-207ENST00000464435 LOC102725191A0A1B0GVB3 256 aa2.31□□□□□ -2.04
USP25-207ENST00000464435 TMEM189A5PLL7 270 aa2.31□□□□□ -2.04
USP25-207ENST00000464435 ZNF860A6NHJ4 632 aa2.31□□□□□ -2.04
USP25-207ENST00000464435 TP53I11O14683 189 aa2.31□□□□□ -2.04
USP25-207ENST00000464435 GGCTO75223 188 aaKnown RBP2.31□□□□□ -2.04
USP25-207ENST00000464435 IGHV3-7P01780 117 aa2.31□□□□□ -2.04
USP25-207ENST00000464435 BPGMP07738 259 aa2.31□□□□□ -2.04
USP25-207ENST00000464435 BCL2P10415 239 aa2.31□□□□□ -2.04
USP25-207ENST00000464435 S100A11P31949 105 aa2.31□□□□□ -2.04
USP25-207ENST00000464435 EIF2B2P49770 351 aaKnown RBP2.31□□□□□ -2.04
USP25-207ENST00000464435 ZNF117Q03924 483 aa2.31□□□□□ -2.04
USP25-207ENST00000464435 MIAQ16674 131 aa2.31□□□□□ -2.04
USP25-207ENST00000464435 RTL8BQ17RB0 113 aa2.31□□□□□ -2.04
USP25-207ENST00000464435 DEFB115Q30KQ5 88 aa2.31□□□□□ -2.04
USP25-207ENST00000464435 DEFB134Q4QY38 66 aa2.31□□□□□ -2.04
USP25-207ENST00000464435 OR10P1Q8NGE3 313 aa2.31□□□□□ -2.04
USP25-207ENST00000464435 OR8D4Q8NGM9 314 aa2.31□□□□□ -2.04
USP25-207ENST00000464435 FGF13Q92913 245 aa2.31□□□□□ -2.04
USP25-207ENST00000464435 BORCS8Q96FH0 119 aa2.31□□□□□ -2.04
USP25-207ENST00000464435 SCGB3A1Q96QR1 104 aa2.31□□□□□ -2.04
USP25-207ENST00000464435 GPX7Q96SL4 187 aaPredicted RBP2.31□□□□□ -2.04
USP25-207ENST00000464435 RTL8AQ9BWD3 113 aa2.31□□□□□ -2.04
USP25-207ENST00000464435 PAIP2BQ9ULR5 123 aaKnown RBP2.31□□□□□ -2.04
USP25-207ENST00000464435 CAMSAP2Q08AD1 1489 aa2.31□□□□□ -2.04
USP25-207ENST00000464435 MAST2Q6P0Q8 1798 aa2.31□□□□□ -2.04
USP25-207ENST00000464435 ECM29Q5VYK3 1845 aa2.31□□□□□ -2.04
USP25-207ENST00000464435 ATG2BQ96BY7 2078 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 A0A087WX48 190 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 A0A1B0GX51 115 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 TRDV1A0A1B0GX56 115 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 TLCD2A6NGC4 264 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 TRGC2P03986 189 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 LGALS3P17931 250 aaKnown RBP2.3□□□□□ -2.04
USP25-207ENST00000464435 RPS3P23396 243 aaKnown RBP eCLIP2.3□□□□□ -2.04
USP25-207ENST00000464435 CMPK1P30085 196 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 CCR2P41597 374 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 XCL1P47992 114 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 FOXA1P55317 472 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 RPS28P62857 69 aaKnown RBP2.3□□□□□ -2.04
USP25-207ENST00000464435 PLCXD2Q0VAA5 305 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 ZNF141Q15928 474 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 FAM229BQ4G0N7 80 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 LINC01554Q52M75 96 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 MIR17HGQ75NE6 70 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 HIST3H2BBQ8N257 126 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 OR8J3Q8NGG0 315 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 OR5A1Q8NGJ0 315 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 SMCR5Q8TEV8 140 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 CANT1Q8WVQ1 401 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 SLAMF6Q96DU3 332 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 SLC25A21Q9BQT8 299 aaPredicted RBP2.3□□□□□ -2.04
USP25-207ENST00000464435 OR8D2Q9GZM6 311 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 AICDAQ9GZX7 198 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 DUSP21Q9H596 190 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 OSTCQ9NRP0 149 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 TXNL4BQ9NX01 149 aaKnown RBP2.3□□□□□ -2.04
USP25-207ENST00000464435 NAT8Q9UHE5 227 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 HSPB8Q9UJY1 196 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 MED31Q9Y3C7 131 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 HEY1Q9Y5J3 304 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 ARAP1Q96P48 1450 aa2.3□□□□□ -2.04
USP25-207ENST00000464435 PLXNB1O43157 2135 aa2.29□□□□□ -2.04
USP25-207ENST00000464435 PLXND1Q9Y4D7 1925 aa2.29□□□□□ -2.04
USP25-207ENST00000464435 ZNF106Q9H2Y7 1883 aaKnown RBP2.29□□□□□ -2.04
USP25-207ENST00000464435 COL18A1P39060 1754 aa2.29□□□□□ -2.04
USP25-207ENST00000464435 REREQ9P2R6 1566 aa2.29□□□□□ -2.04
USP25-207ENST00000464435 SOGA1O94964 1423 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms