RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 SLC25A6P12236 298 aa12.4□□□□□ -0.42
SMARCD3-204ENST00000460431 NPBWR1P48145 328 aa12.4□□□□□ -0.42
SMARCD3-204ENST00000460431 MLANAQ16655 118 aa12.4□□□□□ -0.42
SMARCD3-204ENST00000460431 GTSCR1Q86UQ5 136 aa12.4□□□□□ -0.42
SMARCD3-204ENST00000460431 WWC2-AS2Q96NR7 200 aa12.4□□□□□ -0.42
SMARCD3-204ENST00000460431 HIPK2Q9H2X6 1198 aa12.4□□□□□ -0.42
SMARCD3-204ENST00000460431 FLVCR2Q9UPI3 526 aa12.4□□□□□ -0.42
SMARCD3-204ENST00000460431 C9orf170A2RU37 121 aa12.39□□□□□ -0.43
SMARCD3-204ENST00000460431 C15orf62A8K5M9 175 aa12.39□□□□□ -0.43
SMARCD3-204ENST00000460431 NXPH3O95157 252 aa12.39□□□□□ -0.43
SMARCD3-204ENST00000460431 TMEM50AO95807 157 aa12.39□□□□□ -0.43
SMARCD3-204ENST00000460431 FRMD6-AS1P0C7T7 363 aa12.39□□□□□ -0.43
SMARCD3-204ENST00000460431 IGHV4-30-4P0DP06 118 aa12.39□□□□□ -0.43
SMARCD3-204ENST00000460431 OPRK1P41145 380 aa12.39□□□□□ -0.43
SMARCD3-204ENST00000460431 TMEM61Q8N0U2 210 aa12.39□□□□□ -0.43
SMARCD3-204ENST00000460431 SLC24A4Q8NFF2 622 aa12.39□□□□□ -0.43
SMARCD3-204ENST00000460431 OR1S1Q8NH92 325 aa12.39□□□□□ -0.43
SMARCD3-204ENST00000460431 TMEM170AQ8WVE7 144 aa12.39□□□□□ -0.43
SMARCD3-204ENST00000460431 C20orf24Q9BUV8 137 aa12.39□□□□□ -0.43
SMARCD3-204ENST00000460431 CCDC32Q9BV29 185 aa12.39□□□□□ -0.43
SMARCD3-204ENST00000460431 TMED3Q9Y3Q3 217 aa12.39□□□□□ -0.43
SMARCD3-204ENST00000460431 TENM3Q9P273 2699 aa12.39□□□□□ -0.43
SMARCD3-204ENST00000460431 KMT2CQ8NEZ4 4911 aaKnown RBP12.39□□□□□ -0.43
SMARCD3-204ENST00000460431 BTNL8Q6UX41 500 aa12.38□□□□□ -0.43
SMARCD3-204ENST00000460431 OR4X1Q8NH49 305 aa12.38□□□□□ -0.43
SMARCD3-204ENST00000460431 RNASEH2CQ8TDP1 164 aaKnown RBP12.38□□□□□ -0.43
SMARCD3-204ENST00000460431 S100ZQ8WXG8 99 aa12.38□□□□□ -0.43
SMARCD3-204ENST00000460431 WDR89Q96FK6 387 aaPredicted RBP12.38□□□□□ -0.43
SMARCD3-204ENST00000460431 OR10C1Q96KK4 312 aa12.38□□□□□ -0.43
SMARCD3-204ENST00000460431 ASCL2Q99929 193 aa12.38□□□□□ -0.43
SMARCD3-204ENST00000460431 RBKSQ9H477 322 aa12.38□□□□□ -0.43
SMARCD3-204ENST00000460431 C19orf73Q9NVV2 129 aa12.38□□□□□ -0.43
SMARCD3-204ENST00000460431 MRPL36Q9P0J6 103 aaKnown RBP12.38□□□□□ -0.43
SMARCD3-204ENST00000460431 SELENOKQ9Y6D0 94 aa12.38□□□□□ -0.43
SMARCD3-204ENST00000460431 U3KQ87 197 aa12.38□□□□□ -0.43
SMARCD3-204ENST00000460431 IGHV3OR16-8A0A075B7F1 116 aa12.37□□□□□ -0.43
SMARCD3-204ENST00000460431 TRAV25A0A0B4J276 109 aa12.37□□□□□ -0.43
SMARCD3-204ENST00000460431 LYRM1O43325 122 aa12.37□□□□□ -0.43
SMARCD3-204ENST00000460431 CLN5O75503 358 aa12.37□□□□□ -0.43
SMARCD3-204ENST00000460431 OR4E1P0C645 316 aa12.37□□□□□ -0.43
SMARCD3-204ENST00000460431 GUCA2BQ16661 112 aa12.37□□□□□ -0.43
SMARCD3-204ENST00000460431 NOXA1Q86UR1 476 aa12.37□□□□□ -0.43
SMARCD3-204ENST00000460431 SBSPONQ8IVN8 264 aa12.37□□□□□ -0.43
SMARCD3-204ENST00000460431 DTD1Q8TEA8 209 aa12.37□□□□□ -0.43
SMARCD3-204ENST00000460431 RPS10-NUDT3A0A1W2PQS6 291 aa12.36□□□□□ -0.43
SMARCD3-204ENST00000460431 FAM90A26D6RGX4 464 aa12.36□□□□□ -0.43
SMARCD3-204ENST00000460431 ZNF207O43670 478 aaKnown RBP12.36□□□□□ -0.43
SMARCD3-204ENST00000460431 YIF1AO95070 293 aa12.36□□□□□ -0.43
SMARCD3-204ENST00000460431 HOXB5P09067 269 aa12.36□□□□□ -0.43
SMARCD3-204ENST00000460431 ANXA7P20073 488 aaKnown RBP12.36□□□□□ -0.43
SMARCD3-204ENST00000460431 NPY1RP25929 384 aa12.36□□□□□ -0.43
SMARCD3-204ENST00000460431 ATP5IP56385 69 aaPredicted RBP12.36□□□□□ -0.43
SMARCD3-204ENST00000460431 CD81P60033 236 aa12.36□□□□□ -0.43
SMARCD3-204ENST00000460431 DHRS2Q13268 280 aa12.36□□□□□ -0.43
SMARCD3-204ENST00000460431 GGNBP1Q5YKI7 109 aa12.36□□□□□ -0.43
SMARCD3-204ENST00000460431 LYG2Q86SG7 212 aa12.36□□□□□ -0.43
SMARCD3-204ENST00000460431 NEURL2Q9BR09 285 aa12.36□□□□□ -0.43
SMARCD3-204ENST00000460431 SMPXQ9UHP9 88 aa12.36□□□□□ -0.43
SMARCD3-204ENST00000460431 U3KQK5 164 aa12.36□□□□□ -0.43
SMARCD3-204ENST00000460431 IFNA10P01566 189 aa12.35□□□□□ -0.43
SMARCD3-204ENST00000460431 CD7P09564 240 aa12.35□□□□□ -0.43
SMARCD3-204ENST00000460431 SLC25A4P12235 298 aa12.35□□□□□ -0.43
SMARCD3-204ENST00000460431 TOMM20LQ6UXN7 152 aa12.35□□□□□ -0.43
SMARCD3-204ENST00000460431 ZNF600Q6ZNG1 722 aa12.35□□□□□ -0.43
SMARCD3-204ENST00000460431 RBPMS2Q6ZRY4 209 aaKnown RBP12.35□□□□□ -0.43
SMARCD3-204ENST00000460431 PTTG2Q9NZH5 202 aa12.35□□□□□ -0.43
SMARCD3-204ENST00000460431 TRAV30A0A087WSZ9 112 aa12.34□□□□□ -0.43
SMARCD3-204ENST00000460431 TRAV14DV4A0A0A6YYC5 116 aa12.34□□□□□ -0.43
SMARCD3-204ENST00000460431 IGHV7-4-1A0A0J9YVY3 117 aa12.34□□□□□ -0.43
SMARCD3-204ENST00000460431 SCAF4O95104 1147 aaKnown RBP12.34□□□□□ -0.43
SMARCD3-204ENST00000460431 C4orf46Q504U0 113 aa12.34□□□□□ -0.43
SMARCD3-204ENST00000460431 ETFRF1Q6IPR1 90 aa12.34□□□□□ -0.43
SMARCD3-204ENST00000460431 PRSS54Q6PEW0 395 aa12.34□□□□□ -0.43
SMARCD3-204ENST00000460431 TMEM116Q8NCL8 245 aa12.34□□□□□ -0.43
SMARCD3-204ENST00000460431 COQ8AQ8NI60 647 aa12.34□□□□□ -0.43
SMARCD3-204ENST00000460431 BATF3Q9NR55 127 aa12.34□□□□□ -0.43
SMARCD3-204ENST00000460431 PUS1Q9Y606 427 aaKnown RBP eCLIP12.34□□□□□ -0.43
SMARCD3-204ENST00000460431 CHEK1O14757 476 aa12.33□□□□□ -0.44
SMARCD3-204ENST00000460431 TSPAN4O14817 238 aa12.33□□□□□ -0.44
SMARCD3-204ENST00000460431 MED6O75586 246 aa12.33□□□□□ -0.44
SMARCD3-204ENST00000460431 ADAP1O75689 374 aa12.33□□□□□ -0.44
SMARCD3-204ENST00000460431 IGKV1-17P01599 117 aa12.33□□□□□ -0.44
SMARCD3-204ENST00000460431 TCRBP04435 133 aa12.33□□□□□ -0.44
SMARCD3-204ENST00000460431 LAMTOR1Q6IAA8 161 aa12.33□□□□□ -0.44
SMARCD3-204ENST00000460431 SLC16A13Q7RTY0 426 aa12.33□□□□□ -0.44
SMARCD3-204ENST00000460431 GINS3Q9BRX5 216 aa12.33□□□□□ -0.44
SMARCD3-204ENST00000460431 RHPN1-AS1Q9BWJ2 59 aa12.33□□□□□ -0.44
SMARCD3-204ENST00000460431 C20orf85Q9H1P6 137 aa12.33□□□□□ -0.44
SMARCD3-204ENST00000460431 TUBA4BQ9H853 241 aa12.33□□□□□ -0.44
SMARCD3-204ENST00000460431 ZFAND3Q9H8U3 227 aa12.33□□□□□ -0.44
SMARCD3-204ENST00000460431 SCGB2A1O75556 95 aa12.32□□□□□ -0.44
SMARCD3-204ENST00000460431 RND2P52198 227 aa12.32□□□□□ -0.44
SMARCD3-204ENST00000460431 OR52B4Q8NGK2 314 aa12.32□□□□□ -0.44
SMARCD3-204ENST00000460431 SPAG8Q99932 426 aaPredicted RBP12.32□□□□□ -0.44
SMARCD3-204ENST00000460431 MPTX1A8MV57 137 aa12.31□□□□□ -0.44
SMARCD3-204ENST00000460431 OR11H12B2RN74 326 aa12.31□□□□□ -0.44
SMARCD3-204ENST00000460431 SYNGR2O43760 224 aa12.31□□□□□ -0.44
SMARCD3-204ENST00000460431 IFNA21P01568 189 aa12.31□□□□□ -0.44
SMARCD3-204ENST00000460431 IFNA4P05014 189 aa12.31□□□□□ -0.44
SMARCD3-204ENST00000460431 IGLC1P0CG04 106 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms