RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 CDX1P47902 265 aaPredicted RBP8.29□□□□□ -1.08
USP39-210ENST00000459775 UBE2E1P51965 193 aa8.29□□□□□ -1.08
USP39-210ENST00000459775 LIAT1Q6ZQX7 453 aa8.29□□□□□ -1.08
USP39-210ENST00000459775 SMIM20Q8N5G0 67 aa8.29□□□□□ -1.08
USP39-210ENST00000459775 C8orf31Q8N9H6 132 aa8.29□□□□□ -1.08
USP39-210ENST00000459775 OR1L6Q8NGR2 347 aa8.29□□□□□ -1.08
USP39-210ENST00000459775 OR1L4Q8NGR5 311 aa8.29□□□□□ -1.08
USP39-210ENST00000459775 RPEQ96AT9 228 aa8.29□□□□□ -1.08
USP39-210ENST00000459775 OR10C1Q96KK4 312 aa8.29□□□□□ -1.08
USP39-210ENST00000459775 FYTTD1Q96QD9 318 aaKnown RBP8.29□□□□□ -1.08
USP39-210ENST00000459775 DPM3Q9P2X0 92 aa8.29□□□□□ -1.08
USP39-210ENST00000459775 SONP18583 2426 aaKnown RBP8.28□□□□□ -1.08
USP39-210ENST00000459775 IGHV1-69DA0A0B4J2H0 117 aa8.28□□□□□ -1.08
USP39-210ENST00000459775 A0A1W2PPI3 338 aa8.28□□□□□ -1.08
USP39-210ENST00000459775 SRRM4A7MD48 611 aaKnown RBP8.28□□□□□ -1.08
USP39-210ENST00000459775 RNF212BA8MTL3 300 aa8.28□□□□□ -1.08
USP39-210ENST00000459775 TIMM23O14925 209 aa8.28□□□□□ -1.08
USP39-210ENST00000459775 NPFFO15130 113 aa8.28□□□□□ -1.08
USP39-210ENST00000459775 CDS2O95674 445 aa8.28□□□□□ -1.08
USP39-210ENST00000459775 IGKV1-5P01602 117 aa8.28□□□□□ -1.08
USP39-210ENST00000459775 IGHV1-69P01742 117 aa8.28□□□□□ -1.08
USP39-210ENST00000459775 APOC3P02656 99 aa8.28□□□□□ -1.08
USP39-210ENST00000459775 FGF7P21781 194 aa8.28□□□□□ -1.08
USP39-210ENST00000459775 CNTFRP26992 372 aa8.28□□□□□ -1.08
USP39-210ENST00000459775 LGALS4P56470 323 aa8.28□□□□□ -1.08
USP39-210ENST00000459775 PDZD11Q5EBL8 140 aa8.28□□□□□ -1.08
USP39-210ENST00000459775 FAM120AOSQ5T036 256 aa8.28□□□□□ -1.08
USP39-210ENST00000459775 TPTE2P1Q5T6R2 138 aa8.28□□□□□ -1.08
USP39-210ENST00000459775 Q6ZRM9 215 aa8.28□□□□□ -1.08
USP39-210ENST00000459775 OR4D5Q8NGN0 318 aa8.28□□□□□ -1.08
USP39-210ENST00000459775 OR1P1Q8NH06 330 aa8.28□□□□□ -1.08
USP39-210ENST00000459775 TMEM158Q8WZ71 300 aa8.28□□□□□ -1.08
USP39-210ENST00000459775 HSD17B10Q99714 261 aaKnown RBP8.28□□□□□ -1.08
USP39-210ENST00000459775 GAR1Q9NY12 217 aaKnown RBP8.28□□□□□ -1.08
USP39-210ENST00000459775 INAFM1C9JVW0 142 aa8.27□□□□□ -1.08
USP39-210ENST00000459775 H0YJW9 148 aa8.27□□□□□ -1.08
USP39-210ENST00000459775 IGHG4P01861 327 aa8.27□□□□□ -1.08
USP39-210ENST00000459775 SULT1A3P0DMM9 295 aa8.27□□□□□ -1.08
USP39-210ENST00000459775 SULT1A4P0DMN0 295 aa8.27□□□□□ -1.08
USP39-210ENST00000459775 ZNF137PP52743 207 aa8.27□□□□□ -1.08
USP39-210ENST00000459775 EXOSC2Q13868 293 aaKnown RBP8.27□□□□□ -1.08
USP39-210ENST00000459775 C4orf48Q5BLP8 95 aa8.27□□□□□ -1.08
USP39-210ENST00000459775 GGNBP1Q5YKI7 109 aa8.27□□□□□ -1.08
USP39-210ENST00000459775 ZNF66Q6ZN08 573 aa8.27□□□□□ -1.08
USP39-210ENST00000459775 ZNF695Q8IW36 515 aa8.27□□□□□ -1.08
USP39-210ENST00000459775 RNASEH2CQ8TDP1 164 aaKnown RBP8.27□□□□□ -1.08
USP39-210ENST00000459775 RXFP4Q8TDU9 374 aa8.27□□□□□ -1.08
USP39-210ENST00000459775 CST9LQ9H4G1 147 aa8.27□□□□□ -1.08
USP39-210ENST00000459775 NSG2Q9Y328 171 aa8.27□□□□□ -1.08
USP39-210ENST00000459775 TEX22C9J3V5 150 aa8.27□□□□□ -1.09
USP39-210ENST00000459775 CATR1Q13166 79 aa8.27□□□□□ -1.09
USP39-210ENST00000459775 C11orf87Q6NUJ2 197 aa8.27□□□□□ -1.09
USP39-210ENST00000459775 H2BFWTQ7Z2G1 175 aa8.27□□□□□ -1.09
USP39-210ENST00000459775 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.27□□□□□ -1.09
USP39-210ENST00000459775 PRO1933Q9H354 126 aa8.27□□□□□ -1.09
USP39-210ENST00000459775 LIN7CQ9NUP9 197 aaKnown RBP8.27□□□□□ -1.09
USP39-210ENST00000459775 SS18L2Q9UHA2 77 aa8.27□□□□□ -1.09
USP39-210ENST00000459775 TRAV3A0A0B4J244 114 aa8.26□□□□□ -1.09
USP39-210ENST00000459775 PPP5D1E7EU14 171 aa8.26□□□□□ -1.09
USP39-210ENST00000459775 GAPDHP04406 335 aaKnown RBP8.26□□□□□ -1.09
USP39-210ENST00000459775 MYOD1P15172 320 aa8.26□□□□□ -1.09
USP39-210ENST00000459775 EDN2P20800 178 aa8.26□□□□□ -1.09
USP39-210ENST00000459775 THBS3P49746 956 aa8.26□□□□□ -1.09
USP39-210ENST00000459775 COL5A1-AS1Q5SY13 56 aa8.26□□□□□ -1.09
USP39-210ENST00000459775 OR5AN1Q8NGI8 311 aa8.26□□□□□ -1.09
USP39-210ENST00000459775 ASB13Q8WXK3 278 aa8.26□□□□□ -1.09
USP39-210ENST00000459775 PSG8Q9UQ74 426 aa8.26□□□□□ -1.09
USP39-210ENST00000459775 ANK3Q12955 4377 aaKnown RBP8.26□□□□□ -1.09
USP39-210ENST00000459775 TMEM89A2RUT3 159 aa8.26□□□□□ -1.09
USP39-210ENST00000459775 IL3RAP26951 378 aa8.26□□□□□ -1.09
USP39-210ENST00000459775 BRS3P32247 399 aa8.26□□□□□ -1.09
USP39-210ENST00000459775 OR2B8PP59922 312 aa8.26□□□□□ -1.09
USP39-210ENST00000459775 OR5I1Q13606 314 aa8.26□□□□□ -1.09
USP39-210ENST00000459775 LRRC37A5PQ49AS3 106 aa8.26□□□□□ -1.09
USP39-210ENST00000459775 AKR1C8PQ5T2L2 129 aa8.26□□□□□ -1.09
USP39-210ENST00000459775 LFNGQ8NES3 379 aa8.26□□□□□ -1.09
USP39-210ENST00000459775 GPR146Q96CH1 333 aa8.26□□□□□ -1.09
USP39-210ENST00000459775 MRAP2Q96G30 205 aa8.26□□□□□ -1.09
USP39-210ENST00000459775 QTRT1Q9BXR0 403 aaKnown RBP8.26□□□□□ -1.09
USP39-210ENST00000459775 AMMECR1Q9Y4X0 333 aaPredicted RBP8.26□□□□□ -1.09
USP39-210ENST00000459775 CUBNO60494 3623 aa8.25□□□□□ -1.09
USP39-210ENST00000459775 NSD1Q96L73 2696 aaPredicted RBP8.25□□□□□ -1.09
USP39-210ENST00000459775 SMIM9A6NGZ8 99 aa8.25□□□□□ -1.09
USP39-210ENST00000459775 CORTO00230 105 aa8.25□□□□□ -1.09
USP39-210ENST00000459775 SLC17A3O00476 420 aa8.25□□□□□ -1.09
USP39-210ENST00000459775 DLK1P80370 383 aa8.25□□□□□ -1.09
USP39-210ENST00000459775 MSMO1Q15800 293 aa8.25□□□□□ -1.09
USP39-210ENST00000459775 SVBPQ8N300 66 aa8.25□□□□□ -1.09
USP39-210ENST00000459775 TPSG1Q9NRR2 321 aa8.25□□□□□ -1.09
USP39-210ENST00000459775 SPANXA1Q9NS26 97 aa8.25□□□□□ -1.09
USP39-210ENST00000459775 PSMB11A5LHX3 300 aa8.24□□□□□ -1.09
USP39-210ENST00000459775 OR2J3O76001 311 aa8.24□□□□□ -1.09
USP39-210ENST00000459775 IGKV1D-33P01593 117 aa8.24□□□□□ -1.09
USP39-210ENST00000459775 IGKV1-33P01594 117 aa8.24□□□□□ -1.09
USP39-210ENST00000459775 GATA3P23771 443 aa8.24□□□□□ -1.09
USP39-210ENST00000459775 AKR1C2P52895 323 aa8.24□□□□□ -1.09
USP39-210ENST00000459775 F2RL1P55085 397 aa8.24□□□□□ -1.09
USP39-210ENST00000459775 PJVKQ0ZLH3 352 aa8.24□□□□□ -1.09
USP39-210ENST00000459775 VWC2Q2TAL6 325 aa8.24□□□□□ -1.09
USP39-210ENST00000459775 SPINK9Q5DT21 86 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms