RNA–Protein interactions for RNA: ENST00000456133.5

EPCAM-204, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 1,501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-204ENST00000456133 SFXN4Q6P4A7 337 aa9.48□□□□□ -0.89
EPCAM-204ENST00000456133 DHRS11Q6UWP2 260 aa9.48□□□□□ -0.89
EPCAM-204ENST00000456133 FXYD6Q9H0Q3 95 aa9.48□□□□□ -0.89
EPCAM-204ENST00000456133 TXNL4BQ9NX01 149 aaKnown RBP9.48□□□□□ -0.89
EPCAM-204ENST00000456133 MRPL36Q9P0J6 103 aaKnown RBP9.48□□□□□ -0.89
EPCAM-204ENST00000456133 DNAH5Q8TE73 4624 aa9.47□□□□□ -0.89
EPCAM-204ENST00000456133 FGF9P31371 208 aaPredicted RBP9.47□□□□□ -0.89
EPCAM-204ENST00000456133 CBX5P45973 191 aa9.47□□□□□ -0.89
EPCAM-204ENST00000456133 AQP4P55087 323 aa9.47□□□□□ -0.89
EPCAM-204ENST00000456133 KCTD21Q4G0X4 260 aa9.47□□□□□ -0.89
EPCAM-204ENST00000456133 ZNF705AQ6ZN79 300 aaPredicted RBP9.47□□□□□ -0.89
EPCAM-204ENST00000456133 H2BFWTQ7Z2G1 175 aa9.47□□□□□ -0.89
EPCAM-204ENST00000456133 CMTM1Q8IZ96 169 aa9.47□□□□□ -0.89
EPCAM-204ENST00000456133 TMEM230Q96A57 120 aa9.47□□□□□ -0.89
EPCAM-204ENST00000456133 NARS2Q96I59 477 aaKnown RBP9.47□□□□□ -0.89
EPCAM-204ENST00000456133 SEC22AQ96IW7 307 aa9.47□□□□□ -0.89
EPCAM-204ENST00000456133 NEU1Q99519 415 aa9.47□□□□□ -0.89
EPCAM-204ENST00000456133 NIPSNAP3BQ9BS92 247 aa9.47□□□□□ -0.89
EPCAM-204ENST00000456133 TMEM189A5PLL7 270 aa9.46□□□□□ -0.89
EPCAM-204ENST00000456133 H3BMM0 161 aa9.46□□□□□ -0.89
EPCAM-204ENST00000456133 GPR31O00270 319 aa9.46□□□□□ -0.89
EPCAM-204ENST00000456133 IGKV1-39P01597 117 aa9.46□□□□□ -0.89
EPCAM-204ENST00000456133 PMP2P02689 132 aa9.46□□□□□ -0.89
EPCAM-204ENST00000456133 IGKV1D-39P04432 117 aa9.46□□□□□ -0.89
EPCAM-204ENST00000456133 PHLDA2Q53GA4 152 aa9.46□□□□□ -0.89
EPCAM-204ENST00000456133 FAM222AQ5U5X8 452 aa9.46□□□□□ -0.89
EPCAM-204ENST00000456133 IFT46Q9NQC8 304 aa9.46□□□□□ -0.89
EPCAM-204ENST00000456133 DKK2Q9UBU2 259 aa9.46□□□□□ -0.89
EPCAM-204ENST00000456133 IGHV3OR16-12A0A075B7B8 117 aa9.46□□□□□ -0.9
EPCAM-204ENST00000456133 A0A0A6YYH2 397 aa9.46□□□□□ -0.9
EPCAM-204ENST00000456133 A6NJ64 397 aa9.46□□□□□ -0.9
EPCAM-204ENST00000456133 ZNF705FA8MVS1 300 aaPredicted RBP9.46□□□□□ -0.9
EPCAM-204ENST00000456133 EBAG9O00559 213 aa9.46□□□□□ -0.9
EPCAM-204ENST00000456133 CLN5O75503 358 aa9.46□□□□□ -0.9
EPCAM-204ENST00000456133 CLEC2LP0C7M8 214 aa9.46□□□□□ -0.9
EPCAM-204ENST00000456133 ZNF705DP0CH99 300 aaPredicted RBP9.46□□□□□ -0.9
EPCAM-204ENST00000456133 ZNF705BP0CI00 300 aaPredicted RBP9.46□□□□□ -0.9
EPCAM-204ENST00000456133 SNCAP37840 140 aa9.46□□□□□ -0.9
EPCAM-204ENST00000456133 EIF2B2P49770 351 aaKnown RBP9.46□□□□□ -0.9
EPCAM-204ENST00000456133 FXYD7P58549 80 aa9.46□□□□□ -0.9
EPCAM-204ENST00000456133 MLANAQ16655 118 aa9.46□□□□□ -0.9
EPCAM-204ENST00000456133 TMEM88Q6PEY1 159 aa9.46□□□□□ -0.9
EPCAM-204ENST00000456133 RNF167Q9H6Y7 350 aa9.46□□□□□ -0.9
EPCAM-204ENST00000456133 DIABLOQ9NR28 239 aa9.46□□□□□ -0.9
EPCAM-204ENST00000456133 TMED3Q9Y3Q3 217 aa9.46□□□□□ -0.9
EPCAM-204ENST00000456133 RFNGQ9Y644 331 aa9.46□□□□□ -0.9
EPCAM-204ENST00000456133 U3KQE9 123 aa9.46□□□□□ -0.9
EPCAM-204ENST00000456133 SMIM9A6NGZ8 99 aa9.45□□□□□ -0.9
EPCAM-204ENST00000456133 FAM90A26D6RGX4 464 aa9.45□□□□□ -0.9
EPCAM-204ENST00000456133 MXD1Q05195 221 aa9.45□□□□□ -0.9
EPCAM-204ENST00000456133 IZUMO4Q1ZYL8 232 aa9.45□□□□□ -0.9
EPCAM-204ENST00000456133 TIGITQ495A1 244 aa9.45□□□□□ -0.9
EPCAM-204ENST00000456133 C16orf54Q6UWD8 224 aa9.45□□□□□ -0.9
EPCAM-204ENST00000456133 C6orf223Q8N319 242 aa9.45□□□□□ -0.9
EPCAM-204ENST00000456133 GLMPQ8WWB7 406 aa9.45□□□□□ -0.9
EPCAM-204ENST00000456133 MRGPRFQ96AM1 343 aa9.45□□□□□ -0.9
EPCAM-204ENST00000456133 FNDC4Q9H6D8 234 aaPredicted RBP9.45□□□□□ -0.9
EPCAM-204ENST00000456133 TEX48A0A1B0GUV7 120 aa9.44□□□□□ -0.9
EPCAM-204ENST00000456133 RNASE2P10153 161 aaKnown RBP9.44□□□□□ -0.9
EPCAM-204ENST00000456133 SDC2P34741 201 aa9.44□□□□□ -0.9
EPCAM-204ENST00000456133 SCAND1P57086 179 aa9.44□□□□□ -0.9
EPCAM-204ENST00000456133 IDNKQ5T6J7 187 aa9.44□□□□□ -0.9
EPCAM-204ENST00000456133 TBC1D26Q86UD7 250 aa9.44□□□□□ -0.9
EPCAM-204ENST00000456133 OR5H2Q8NGV7 314 aa9.44□□□□□ -0.9
EPCAM-204ENST00000456133 YTHDF1Q9BYJ9 559 aaKnown RBP9.44□□□□□ -0.9
EPCAM-204ENST00000456133 FAM212BQ9NTI7 297 aaPredicted RBP9.44□□□□□ -0.9
EPCAM-204ENST00000456133 NBDYA0A0U1RRE5 68 aa9.43□□□□□ -0.9
EPCAM-204ENST00000456133 IGKV1-17P01599 117 aa9.43□□□□□ -0.9
EPCAM-204ENST00000456133 IGKV3-20P01619 116 aa9.43□□□□□ -0.9
EPCAM-204ENST00000456133 HLA-DRB4P13762 266 aa9.43□□□□□ -0.9
EPCAM-204ENST00000456133 AP2S1P53680 142 aaPredicted RBP9.43□□□□□ -0.9
EPCAM-204ENST00000456133 FAM3BP58499 235 aaPredicted RBP9.43□□□□□ -0.9
EPCAM-204ENST00000456133 SNRPD3P62318 126 aaKnown RBP9.43□□□□□ -0.9
EPCAM-204ENST00000456133 SLC35G3Q8N808 338 aa9.43□□□□□ -0.9
EPCAM-204ENST00000456133 OR6F1Q8NGZ6 308 aa9.43□□□□□ -0.9
EPCAM-204ENST00000456133 OR4X1Q8NH49 305 aa9.43□□□□□ -0.9
EPCAM-204ENST00000456133 HLA-DRB4X5D2U9 266 aa9.43□□□□□ -0.9
EPCAM-204ENST00000456133 DMBT1Q9UGM3 2413 aaPredicted RBP9.42□□□□□ -0.9
EPCAM-204ENST00000456133 CORTO00230 105 aa9.42□□□□□ -0.9
EPCAM-204ENST00000456133 HNRNPCP07910 306 aaKnown RBP eCLIP9.42□□□□□ -0.9
EPCAM-204ENST00000456133 OPRK1P41145 380 aa9.42□□□□□ -0.9
EPCAM-204ENST00000456133 SUB1P53999 127 aaKnown RBP eCLIP9.42□□□□□ -0.92e-7■■■■□ 24.7
EPCAM-204ENST00000456133 DEFB1P60022 68 aa9.42□□□□□ -0.9
EPCAM-204ENST00000456133 OXA1LQ15070 435 aa9.42□□□□□ -0.9
EPCAM-204ENST00000456133 GDF5OSQ5U4N7 250 aa9.42□□□□□ -0.9
EPCAM-204ENST00000456133 NRG4Q8WWG1 115 aa9.42□□□□□ -0.9
EPCAM-204ENST00000456133 ATG101Q9BSB4 218 aa9.42□□□□□ -0.9
EPCAM-204ENST00000456133 ANAPC10Q9UM13 185 aa9.42□□□□□ -0.9
EPCAM-204ENST00000456133 SSR3Q9UNL2 185 aa9.42□□□□□ -0.9
EPCAM-204ENST00000456133 SCGB2A1O75556 95 aa9.41□□□□□ -0.9
EPCAM-204ENST00000456133 S100GP29377 79 aa9.41□□□□□ -0.9
EPCAM-204ENST00000456133 TAS2R46P59540 309 aa9.41□□□□□ -0.9
EPCAM-204ENST00000456133 SPATA12Q7Z6I5 190 aa9.41□□□□□ -0.9
EPCAM-204ENST00000456133 SEPSECSQ9HD40 501 aaKnown RBP9.41□□□□□ -0.9
EPCAM-204ENST00000456133 NRN1Q9NPD7 142 aa9.41□□□□□ -0.9
EPCAM-204ENST00000456133 INS-IGF2F8WCM5 200 aa9.41□□□□□ -0.9
EPCAM-204ENST00000456133 NAT1P18440 290 aa9.41□□□□□ -0.9
EPCAM-204ENST00000456133 PSMB9P28065 219 aa9.41□□□□□ -0.9
EPCAM-204ENST00000456133 DAD1P61803 113 aa9.41□□□□□ -0.9
EPCAM-204ENST00000456133 C15orf53Q8NAA6 179 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms