RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 POM121L12Q8N7R1 296 aa13.46□□□□□ -0.25
MSH6-206ENST00000455383 MRPL36Q9P0J6 103 aaKnown RBP13.46□□□□□ -0.25
MSH6-206ENST00000455383 CELA1Q9UNI1 258 aa13.46□□□□□ -0.25
MSH6-206ENST00000455383 P0C879 139 aa13.45□□□□□ -0.26
MSH6-206ENST00000455383 CROCCP3Q8IVE0 287 aa13.45□□□□□ -0.26
MSH6-206ENST00000455383 STXBP6Q8NFX7 210 aa13.45□□□□□ -0.26
MSH6-206ENST00000455383 TBC1D24Q9ULP9 559 aa13.45□□□□□ -0.26
MSH6-206ENST00000455383 DEFB131BA0A096LNP1 70 aa13.44□□□□□ -0.26
MSH6-206ENST00000455383 PRSS29PA6NIE9 313 aa13.44□□□□□ -0.26
MSH6-206ENST00000455383 CLN5O75503 358 aa13.44□□□□□ -0.26
MSH6-206ENST00000455383 ZNF688P0C7X2 276 aa13.44□□□□□ -0.26
MSH6-206ENST00000455383 P0DMU3 169 aa13.44□□□□□ -0.26
MSH6-206ENST00000455383 FAM231AP0DMU4 169 aa13.44□□□□□ -0.26
MSH6-206ENST00000455383 FAM231CP0DMU5 169 aa13.44□□□□□ -0.26
MSH6-206ENST00000455383 RNASE2P10153 161 aaKnown RBP13.44□□□□□ -0.26
MSH6-206ENST00000455383 HLA-DMAP28067 261 aa13.44□□□□□ -0.26
MSH6-206ENST00000455383 PRSS3P35030 304 aa13.44□□□□□ -0.26
MSH6-206ENST00000455383 P2RY1P47900 373 aa13.44□□□□□ -0.26
MSH6-206ENST00000455383 IZUMO4Q1ZYL8 232 aa13.44□□□□□ -0.26
MSH6-206ENST00000455383 SPINK9Q5DT21 86 aa13.44□□□□□ -0.26
MSH6-206ENST00000455383 CENPSQ8N2Z9 138 aa13.44□□□□□ -0.26
MSH6-206ENST00000455383 GPX8Q8TED1 209 aa13.44□□□□□ -0.26
MSH6-206ENST00000455383 METTL26Q96S19 204 aa13.44□□□□□ -0.26
MSH6-206ENST00000455383 FNDC4Q9H6D8 234 aaPredicted RBP13.44□□□□□ -0.26
MSH6-206ENST00000455383 CLEC5AQ9NY25 188 aa13.44□□□□□ -0.26
MSH6-206ENST00000455383 CORTO00230 105 aa13.43□□□□□ -0.26
MSH6-206ENST00000455383 SNCAP37840 140 aa13.43□□□□□ -0.26
MSH6-206ENST00000455383 PPP5CP53041 499 aa13.43□□□□□ -0.26
MSH6-206ENST00000455383 KCTD21Q4G0X4 260 aa13.43□□□□□ -0.26
MSH6-206ENST00000455383 ACTL10Q5JWF8 245 aa13.43□□□□□ -0.26
MSH6-206ENST00000455383 OR4X1Q8NH49 305 aa13.43□□□□□ -0.26
MSH6-206ENST00000455383 MUC4Q99102 2169 aa13.43□□□□□ -0.26
MSH6-206ENST00000455383 U3KQE9 123 aa13.43□□□□□ -0.26
MSH6-206ENST00000455383 A0A0B4J293 547 aa13.42□□□□□ -0.26
MSH6-206ENST00000455383 IGKV1-5P01602 117 aa13.42□□□□□ -0.26
MSH6-206ENST00000455383 RPL5P46777 297 aaKnown RBP13.42□□□□□ -0.26
MSH6-206ENST00000455383 TSPAN5P62079 268 aa13.42□□□□□ -0.26
MSH6-206ENST00000455383 LGALS9BQ3B8N2 356 aa13.42□□□□□ -0.26
MSH6-206ENST00000455383 SAMD12Q8N8I0 201 aa13.42□□□□□ -0.26
MSH6-206ENST00000455383 RAB40CQ96S21 281 aa13.42□□□□□ -0.26
MSH6-206ENST00000455383 SCRT1Q9BWW7 348 aa13.42□□□□□ -0.26
MSH6-206ENST00000455383 IGKV1-17P01599 117 aa13.41□□□□□ -0.26
MSH6-206ENST00000455383 TGFBR1P36897 503 aa13.41□□□□□ -0.26
MSH6-206ENST00000455383 RND3P61587 244 aa13.41□□□□□ -0.26
MSH6-206ENST00000455383 MLANAQ16655 118 aa13.41□□□□□ -0.26
MSH6-206ENST00000455383 BSXQ3C1V8 233 aa13.41□□□□□ -0.26
MSH6-206ENST00000455383 ZNF767PQ75MW2 155 aa13.41□□□□□ -0.26
MSH6-206ENST00000455383 SLC35G3Q8N808 338 aa13.41□□□□□ -0.26
MSH6-206ENST00000455383 NDUFAF3Q9BU61 184 aa13.41□□□□□ -0.26
MSH6-206ENST00000455383 HSPG2P98160 4391 aa13.41□□□□□ -0.26
MSH6-206ENST00000455383 RPS19P39019 145 aaKnown RBP13.4□□□□□ -0.26
MSH6-206ENST00000455383 SUB1P53999 127 aaKnown RBP eCLIP13.4□□□□□ -0.26
MSH6-206ENST00000455383 C16orf54Q6UWD8 224 aa13.39□□□□□ -0.27
MSH6-206ENST00000455383 GLMPQ8WWB7 406 aa13.39□□□□□ -0.27
MSH6-206ENST00000455383 TMEM230Q96A57 120 aa13.39□□□□□ -0.27
MSH6-206ENST00000455383 NARS2Q96I59 477 aaKnown RBP13.39□□□□□ -0.27
MSH6-206ENST00000455383 SCPEP1Q9HB40 452 aa13.39□□□□□ -0.27
MSH6-206ENST00000455383 M0R2N4 97 aa13.38□□□□□ -0.27
MSH6-206ENST00000455383 IFNA17P01571 189 aa13.38□□□□□ -0.27
MSH6-206ENST00000455383 CD74P04233 296 aa13.38□□□□□ -0.27
MSH6-206ENST00000455383 OPRK1P41145 380 aa13.38□□□□□ -0.27
MSH6-206ENST00000455383 ETV6P41212 452 aa13.38□□□□□ -0.27
MSH6-206ENST00000455383 DHRS2Q13268 280 aa13.38□□□□□ -0.27
MSH6-206ENST00000455383 NEDD8Q15843 81 aa13.38□□□□□ -0.27
MSH6-206ENST00000455383 TIGITQ495A1 244 aa13.38□□□□□ -0.27
MSH6-206ENST00000455383 ZNF486Q96H40 463 aaPredicted RBP13.38□□□□□ -0.27
MSH6-206ENST00000455383 TP53RKQ96S44 253 aa13.38□□□□□ -0.27
MSH6-206ENST00000455383 C1QTNF4Q9BXJ3 329 aa13.38□□□□□ -0.27
MSH6-206ENST00000455383 SEPSECSQ9HD40 501 aaKnown RBP13.38□□□□□ -0.27
MSH6-206ENST00000455383 TRAV30A0A087WSZ9 112 aa13.37□□□□□ -0.27
MSH6-206ENST00000455383 HELTA6NFD8 242 aa13.37□□□□□ -0.27
MSH6-206ENST00000455383 SCGB2A1O75556 95 aa13.37□□□□□ -0.27
MSH6-206ENST00000455383 NPY1RP25929 384 aa13.37□□□□□ -0.27
MSH6-206ENST00000455383 RCVRNP35243 200 aa13.37□□□□□ -0.27
MSH6-206ENST00000455383 EIF2B2P49770 351 aaKnown RBP13.37□□□□□ -0.27
MSH6-206ENST00000455383 AP2S1P53680 142 aaPredicted RBP13.37□□□□□ -0.27
MSH6-206ENST00000455383 PSMG4Q5JS54 123 aa13.37□□□□□ -0.27
MSH6-206ENST00000455383 Q6ZR54 194 aa13.37□□□□□ -0.27
MSH6-206ENST00000455383 LHFPL1Q86WI0 220 aa13.37□□□□□ -0.27
MSH6-206ENST00000455383 NEU1Q99519 415 aa13.37□□□□□ -0.27
MSH6-206ENST00000455383 Q9H521 79 aa13.37□□□□□ -0.27
MSH6-206ENST00000455383 H3BMM0 161 aa13.36□□□□□ -0.27
MSH6-206ENST00000455383 HOXA1P49639 335 aaPredicted RBP13.36□□□□□ -0.27
MSH6-206ENST00000455383 AARDQ4LEZ3 155 aa13.36□□□□□ -0.27
MSH6-206ENST00000455383 ZNF705AQ6ZN79 300 aaPredicted RBP13.36□□□□□ -0.27
MSH6-206ENST00000455383 PDCD10Q9BUL8 212 aa13.36□□□□□ -0.27
MSH6-206ENST00000455383 A0A0G2JRQ6 117 aa13.35□□□□□ -0.27
MSH6-206ENST00000455383 FAM90A26D6RGX4 464 aa13.35□□□□□ -0.27
MSH6-206ENST00000455383 ATG12O94817 140 aa13.35□□□□□ -0.27
MSH6-206ENST00000455383 HNRNPCP07910 306 aaKnown RBP eCLIP13.35□□□□□ -0.27
MSH6-206ENST00000455383 IGLC1P0CG04 106 aa13.35□□□□□ -0.27
MSH6-206ENST00000455383 PI3P19957 117 aa13.35□□□□□ -0.27
MSH6-206ENST00000455383 AKR1C2P52895 323 aa13.35□□□□□ -0.27
MSH6-206ENST00000455383 PIGPP57054 158 aa13.35□□□□□ -0.27
MSH6-206ENST00000455383 NUTF2P61970 127 aaKnown RBP13.35□□□□□ -0.27
MSH6-206ENST00000455383 OR1S2Q8NGQ3 325 aa13.35□□□□□ -0.27
MSH6-206ENST00000455383 KRTAP4-5Q9BYR2 181 aa13.35□□□□□ -0.27
MSH6-206ENST00000455383 XCL2Q9UBD3 114 aa13.35□□□□□ -0.27
MSH6-206ENST00000455383 LRP1BQ9NZR2 4599 aa13.34□□□□□ -0.27
MSH6-206ENST00000455383 APOA1P02647 267 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms