RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 RFX2P48378 723 aa7.03□□□□□ -1.28
CLCN4-204ENST00000454850 FXYD7P58549 80 aa7.03□□□□□ -1.28
CLCN4-204ENST00000454850 ERHP84090 104 aaKnown RBP7.03□□□□□ -1.28
CLCN4-204ENST00000454850 TBCEQ15813 527 aaPredicted RBP7.03□□□□□ -1.28
CLCN4-204ENST00000454850 PHLDA2Q53GA4 152 aa7.03□□□□□ -1.28
CLCN4-204ENST00000454850 FAM222AQ5U5X8 452 aa7.03□□□□□ -1.28
CLCN4-204ENST00000454850 TMEM88Q6PEY1 159 aa7.03□□□□□ -1.28
CLCN4-204ENST00000454850 CMTM1Q8IZ96 169 aa7.03□□□□□ -1.28
CLCN4-204ENST00000454850 TMEM230Q96A57 120 aa7.03□□□□□ -1.28
CLCN4-204ENST00000454850 NIPSNAP3BQ9BS92 247 aa7.03□□□□□ -1.28
CLCN4-204ENST00000454850 ATG101Q9BSB4 218 aa7.03□□□□□ -1.28
CLCN4-204ENST00000454850 ZNF2Q9BSG1 426 aaPredicted RBP7.03□□□□□ -1.28
CLCN4-204ENST00000454850 RNF167Q9H6Y7 350 aa7.03□□□□□ -1.28
CLCN4-204ENST00000454850 IFT46Q9NQC8 304 aa7.03□□□□□ -1.28
CLCN4-204ENST00000454850 TMEM189A5PLL7 270 aa7.02□□□□□ -1.29
CLCN4-204ENST00000454850 CRYBB3P26998 211 aa7.02□□□□□ -1.29
CLCN4-204ENST00000454850 SNCAP37840 140 aa7.02□□□□□ -1.29
CLCN4-204ENST00000454850 EIF2B2P49770 351 aaKnown RBP7.02□□□□□ -1.29
CLCN4-204ENST00000454850 SFXN4Q6P4A7 337 aa7.02□□□□□ -1.29
CLCN4-204ENST00000454850 ZNF705AQ6ZN79 300 aaPredicted RBP7.02□□□□□ -1.29
CLCN4-204ENST00000454850 H2BFWTQ7Z2G1 175 aa7.02□□□□□ -1.29
CLCN4-204ENST00000454850 SPATA12Q7Z6I5 190 aa7.02□□□□□ -1.29
CLCN4-204ENST00000454850 C6orf223Q8N319 242 aa7.02□□□□□ -1.29
CLCN4-204ENST00000454850 OR5H6Q8NGV6 325 aa7.02□□□□□ -1.29
CLCN4-204ENST00000454850 SLC25A38Q96DW6 304 aa7.02□□□□□ -1.29
CLCN4-204ENST00000454850 YTHDF1Q9BYJ9 559 aaKnown RBP7.02□□□□□ -1.29
CLCN4-204ENST00000454850 FXYD6Q9H0Q3 95 aa7.02□□□□□ -1.29
CLCN4-204ENST00000454850 AUNIPQ9H7T9 357 aa7.02□□□□□ -1.29
CLCN4-204ENST00000454850 MRPL36Q9P0J6 103 aaKnown RBP7.02□□□□□ -1.29
CLCN4-204ENST00000454850 DKK2Q9UBU2 259 aa7.02□□□□□ -1.29
CLCN4-204ENST00000454850 FLG2Q5D862 2391 aaPredicted RBP7.01□□□□□ -1.29
CLCN4-204ENST00000454850 ZNF705FA8MVS1 300 aaPredicted RBP7.01□□□□□ -1.29
CLCN4-204ENST00000454850 FAM90A26D6RGX4 464 aa7.01□□□□□ -1.29
CLCN4-204ENST00000454850 H3BMM0 161 aa7.01□□□□□ -1.29
CLCN4-204ENST00000454850 GPR31O00270 319 aa7.01□□□□□ -1.29
CLCN4-204ENST00000454850 PMP2P02689 132 aa7.01□□□□□ -1.29
CLCN4-204ENST00000454850 ZNF705DP0CH99 300 aaPredicted RBP7.01□□□□□ -1.29
CLCN4-204ENST00000454850 ZNF705BP0CI00 300 aaPredicted RBP7.01□□□□□ -1.29
CLCN4-204ENST00000454850 CBX5P45973 191 aa7.01□□□□□ -1.29
CLCN4-204ENST00000454850 AQP4P55087 323 aa7.01□□□□□ -1.29
CLCN4-204ENST00000454850 DEFB1P60022 68 aa7.01□□□□□ -1.29
CLCN4-204ENST00000454850 HSPE1P61604 102 aaKnown RBP7.01□□□□□ -1.29
CLCN4-204ENST00000454850 SNRPD3P62318 126 aaKnown RBP7.01□□□□□ -1.29
CLCN4-204ENST00000454850 IZUMO4Q1ZYL8 232 aa7.01□□□□□ -1.29
CLCN4-204ENST00000454850 TIGITQ495A1 244 aa7.01□□□□□ -1.29
CLCN4-204ENST00000454850 KCTD21Q4G0X4 260 aa7.01□□□□□ -1.29
CLCN4-204ENST00000454850 CADM3Q8N126 398 aa7.01□□□□□ -1.29
CLCN4-204ENST00000454850 SLC35G3Q8N808 338 aa7.01□□□□□ -1.29
CLCN4-204ENST00000454850 MRGPRFQ96AM1 343 aa7.01□□□□□ -1.29
CLCN4-204ENST00000454850 SEC22AQ96IW7 307 aa7.01□□□□□ -1.29
CLCN4-204ENST00000454850 NEU1Q99519 415 aa7.01□□□□□ -1.29
CLCN4-204ENST00000454850 TXNL4BQ9NX01 149 aaKnown RBP7.01□□□□□ -1.29
CLCN4-204ENST00000454850 RFNGQ9Y644 331 aa7.01□□□□□ -1.29
CLCN4-204ENST00000454850 FAT1Q14517 4588 aa7.01□□□□□ -1.29
CLCN4-204ENST00000454850 NBDYA0A0U1RRE5 68 aa7□□□□□ -1.29
CLCN4-204ENST00000454850 TEX48A0A1B0GUV7 120 aa7□□□□□ -1.29
CLCN4-204ENST00000454850 CLN5O75503 358 aa7□□□□□ -1.29
CLCN4-204ENST00000454850 IGKV1-39P01597 117 aa7□□□□□ -1.29
CLCN4-204ENST00000454850 IGKV1D-39P04432 117 aa7□□□□□ -1.29
CLCN4-204ENST00000454850 CLEC2LP0C7M8 214 aa7□□□□□ -1.29
CLCN4-204ENST00000454850 OPRK1P41145 380 aa7□□□□□ -1.29
CLCN4-204ENST00000454850 DAD1P61803 113 aa7□□□□□ -1.29
CLCN4-204ENST00000454850 MXD1Q05195 221 aa7□□□□□ -1.29
CLCN4-204ENST00000454850 MLANAQ16655 118 aa7□□□□□ -1.29
CLCN4-204ENST00000454850 GDF5OSQ5U4N7 250 aa7□□□□□ -1.29
CLCN4-204ENST00000454850 TBC1D26Q86UD7 250 aa7□□□□□ -1.29
CLCN4-204ENST00000454850 OR5H2Q8NGV7 314 aa7□□□□□ -1.29
CLCN4-204ENST00000454850 GLMPQ8WWB7 406 aa7□□□□□ -1.29
CLCN4-204ENST00000454850 LOC102723971A0A1B0GUV8 181 aa6.99□□□□□ -1.29
CLCN4-204ENST00000454850 SMIM9A6NGZ8 99 aa6.99□□□□□ -1.29
CLCN4-204ENST00000454850 SCGB2A1O75556 95 aa6.99□□□□□ -1.29
CLCN4-204ENST00000454850 HNRNPCP07910 306 aaKnown RBP eCLIP6.99□□□□□ -1.29
CLCN4-204ENST00000454850 HLA-DRB4P13762 266 aa6.99□□□□□ -1.29
CLCN4-204ENST00000454850 HOXA1P49639 335 aaPredicted RBP6.99□□□□□ -1.29
CLCN4-204ENST00000454850 IDNKQ5T6J7 187 aa6.99□□□□□ -1.29
CLCN4-204ENST00000454850 C16orf54Q6UWD8 224 aa6.99□□□□□ -1.29
CLCN4-204ENST00000454850 DHRS11Q6UWP2 260 aa6.99□□□□□ -1.29
CLCN4-204ENST00000454850 FNDC4Q9H6D8 234 aaPredicted RBP6.99□□□□□ -1.29
CLCN4-204ENST00000454850 NRN1Q9NPD7 142 aa6.99□□□□□ -1.29
CLCN4-204ENST00000454850 DIABLOQ9NR28 239 aa6.99□□□□□ -1.29
CLCN4-204ENST00000454850 YTHDF2Q9Y5A9 579 aaKnown RBP6.99□□□□□ -1.29
CLCN4-204ENST00000454850 HLA-DRB4X5D2U9 266 aa6.99□□□□□ -1.29
CLCN4-204ENST00000454850 CORTO00230 105 aa6.98□□□□□ -1.29
CLCN4-204ENST00000454850 IGKV1-17P01599 117 aa6.98□□□□□ -1.29
CLCN4-204ENST00000454850 RNASE2P10153 161 aaKnown RBP6.98□□□□□ -1.29
CLCN4-204ENST00000454850 PSMB9P28065 219 aa6.98□□□□□ -1.29
CLCN4-204ENST00000454850 S100GP29377 79 aa6.98□□□□□ -1.29
CLCN4-204ENST00000454850 SDC2P34741 201 aa6.98□□□□□ -1.29
CLCN4-204ENST00000454850 AP2S1P53680 142 aaPredicted RBP6.98□□□□□ -1.29
CLCN4-204ENST00000454850 FAM3BP58499 235 aaPredicted RBP6.98□□□□□ -1.29
CLCN4-204ENST00000454850 GSG1LQ6UXU4 331 aa6.98□□□□□ -1.29
CLCN4-204ENST00000454850 SIGLEC15Q6ZMC9 328 aa6.98□□□□□ -1.29
CLCN4-204ENST00000454850 C15orf53Q8NAA6 179 aa6.98□□□□□ -1.29
CLCN4-204ENST00000454850 OR4X1Q8NH49 305 aa6.98□□□□□ -1.29
CLCN4-204ENST00000454850 ZNRF2Q8NHG8 242 aa6.98□□□□□ -1.29
CLCN4-204ENST00000454850 C7orf50Q9BRJ6 194 aaKnown RBP6.98□□□□□ -1.29
CLCN4-204ENST00000454850 U3KQE9 123 aa6.98□□□□□ -1.29
CLCN4-204ENST00000454850 A0A0A6YYH2 397 aa6.97□□□□□ -1.29
CLCN4-204ENST00000454850 RPS10-NUDT3A0A1W2PQS6 291 aa6.97□□□□□ -1.29
CLCN4-204ENST00000454850 A6NJ64 397 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms