RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 WDR61Q9GZS3 305 aaKnown RBP9.81□□□□□ -0.84
HLA-DPA1-244ENST00000453337 WDR83OSQ9Y284 106 aa9.81□□□□□ -0.84
HLA-DPA1-244ENST00000453337 FN1P02751 2386 aaKnown RBP9.81□□□□□ -0.84
HLA-DPA1-244ENST00000453337 UBE2L5PA0A1B0GUS4 154 aa9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 FAM223BA6NKX1 122 aa9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 K7EIM0 57 aa9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 SOX15O60248 233 aa9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 NDUFB8O95169 186 aa9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 IGLV1-40P01703 118 aa9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 IGHG4P01861 327 aa9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 MDKP21741 143 aaPredicted RBP9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 FGF7P21781 194 aa9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 NPBWR1P48145 328 aa9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 MFAP4P55083 255 aa9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 RHOGP84095 191 aa9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 ATP5G2Q06055 141 aa9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 ACSM6Q6P461 480 aa9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 TEX38Q6PEX7 206 aa9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 BTNL8Q6UX41 500 aa9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 TREML4Q6UXN2 200 aa9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 FAM223AQ8IWN6 122 aa9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 ZNF709Q8N972 641 aa9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 OR4X1Q8NH49 305 aa9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 SCARB1Q8WTV0 552 aa9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 NPIPB3Q92617 1050 aa9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 TAF15Q92804 592 aaKnown RBP eCLIP9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 PHYHIPLQ96FC7 376 aa9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 USMG5Q96IX5 58 aa9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 MS4A10Q96PG2 267 aa9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 TXN2Q99757 166 aa9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 C16orf95Q9H693 158 aa9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 GAR1Q9NY12 217 aaKnown RBP9.8□□□□□ -0.84
HLA-DPA1-244ENST00000453337 TRAV30A0A087WSZ9 112 aa9.79□□□□□ -0.84
HLA-DPA1-244ENST00000453337 A0A0G2JLM5 398 aa9.79□□□□□ -0.84
HLA-DPA1-244ENST00000453337 PSMB11A5LHX3 300 aa9.79□□□□□ -0.84
HLA-DPA1-244ENST00000453337 C17orf112F2Z3M2 114 aa9.79□□□□□ -0.84
HLA-DPA1-244ENST00000453337 IFNA7P01567 189 aa9.79□□□□□ -0.84
HLA-DPA1-244ENST00000453337 TRGV3P03979 118 aa9.79□□□□□ -0.84
HLA-DPA1-244ENST00000453337 SEC11BP0C7V7 166 aa9.79□□□□□ -0.84
HLA-DPA1-244ENST00000453337 PF4V1P10720 104 aa9.79□□□□□ -0.84
HLA-DPA1-244ENST00000453337 CFHR3Q02985 330 aa9.79□□□□□ -0.84
HLA-DPA1-244ENST00000453337 TMEM95Q3KNT9 176 aa9.79□□□□□ -0.84
HLA-DPA1-244ENST00000453337 TEX261Q6UWH6 196 aa9.79□□□□□ -0.84
HLA-DPA1-244ENST00000453337 COMMD1Q8N668 190 aa9.79□□□□□ -0.84
HLA-DPA1-244ENST00000453337 HSD17B11Q8NBQ5 300 aa9.79□□□□□ -0.84
HLA-DPA1-244ENST00000453337 ACY3Q96HD9 319 aa9.79□□□□□ -0.84
HLA-DPA1-244ENST00000453337 SERTAD4Q9NUC0 356 aa9.79□□□□□ -0.84
HLA-DPA1-244ENST00000453337 ANK3Q12955 4377 aaKnown RBP9.79□□□□□ -0.84
HLA-DPA1-244ENST00000453337 TRBV7-1A0A0A6YYK4 115 aa9.78□□□□□ -0.84
HLA-DPA1-244ENST00000453337 IGHV3-21A0A0B4J1V1 117 aa9.78□□□□□ -0.84
HLA-DPA1-244ENST00000453337 SCGB2A1O75556 95 aa9.78□□□□□ -0.84
HLA-DPA1-244ENST00000453337 NDUFA7O95182 113 aa9.78□□□□□ -0.84
HLA-DPA1-244ENST00000453337 IGHV3-48P01763 117 aa9.78□□□□□ -0.84
HLA-DPA1-244ENST00000453337 ELANEP08246 267 aa9.78□□□□□ -0.84
HLA-DPA1-244ENST00000453337 SPP1P10451 314 aa9.78□□□□□ -0.84
HLA-DPA1-244ENST00000453337 ATP6V0CP27449 155 aa9.78□□□□□ -0.84
HLA-DPA1-244ENST00000453337 FCGR2BP31994 310 aaPredicted RBP9.78□□□□□ -0.84
HLA-DPA1-244ENST00000453337 RAB9AP51151 201 aa9.78□□□□□ -0.84
HLA-DPA1-244ENST00000453337 RND2P52198 227 aa9.78□□□□□ -0.84
HLA-DPA1-244ENST00000453337 TPPP2P59282 170 aa9.78□□□□□ -0.84
HLA-DPA1-244ENST00000453337 FOXE3Q13461 319 aa9.78□□□□□ -0.84
HLA-DPA1-244ENST00000453337 C15orf32Q32M92 178 aa9.78□□□□□ -0.84
HLA-DPA1-244ENST00000453337 ZNF329Q86UD4 541 aa9.78□□□□□ -0.84
HLA-DPA1-244ENST00000453337 THAP8Q8NA92 274 aa9.78□□□□□ -0.84
HLA-DPA1-244ENST00000453337 ZNF680Q8NEM1 530 aa9.78□□□□□ -0.84
HLA-DPA1-244ENST00000453337 EEF1AKMT3Q96AZ1 226 aa9.78□□□□□ -0.84
HLA-DPA1-244ENST00000453337 ATP6V0BQ99437 205 aa9.78□□□□□ -0.84
HLA-DPA1-244ENST00000453337 PSMG3Q9BT73 122 aaPredicted RBP9.78□□□□□ -0.84
HLA-DPA1-244ENST00000453337 C21orf62Q9NYP8 219 aa9.78□□□□□ -0.84
HLA-DPA1-244ENST00000453337 LSM4Q9Y4Z0 139 aaKnown RBP9.78□□□□□ -0.84
HLA-DPA1-244ENST00000453337 TIMM9Q9Y5J7 89 aa9.78□□□□□ -0.84
HLA-DPA1-244ENST00000453337 ZFP92A6NM28 416 aa9.77□□□□□ -0.85
HLA-DPA1-244ENST00000453337 GNG7O60262 68 aa9.77□□□□□ -0.85
HLA-DPA1-244ENST00000453337 CLN5O75503 358 aa9.77□□□□□ -0.85
HLA-DPA1-244ENST00000453337 CFDP00746 253 aaPredicted RBP9.77□□□□□ -0.85
HLA-DPA1-244ENST00000453337 FABP1P07148 127 aa9.77□□□□□ -0.85
HLA-DPA1-244ENST00000453337 PSMB8P28062 276 aa9.77□□□□□ -0.85
HLA-DPA1-244ENST00000453337 CAMLGP49069 296 aa9.77□□□□□ -0.85
HLA-DPA1-244ENST00000453337 SELENOTP62341 195 aa9.77□□□□□ -0.85
HLA-DPA1-244ENST00000453337 SERF2P84101 59 aa9.77□□□□□ -0.85
HLA-DPA1-244ENST00000453337 FAM209BQ5JX69 171 aa9.77□□□□□ -0.85
HLA-DPA1-244ENST00000453337 OR2G3Q8NGZ4 309 aa9.77□□□□□ -0.85
HLA-DPA1-244ENST00000453337 OR4F5Q8NH21 305 aa9.77□□□□□ -0.85
HLA-DPA1-244ENST00000453337 TRGV9Q99603 122 aa9.77□□□□□ -0.85
HLA-DPA1-244ENST00000453337 NPCDR1Q9BY65 106 aa9.77□□□□□ -0.85
HLA-DPA1-244ENST00000453337 SLC25A32Q9H2D1 315 aa9.77□□□□□ -0.85
HLA-DPA1-244ENST00000453337 KCNIP2Q9NS61 270 aa9.77□□□□□ -0.85
HLA-DPA1-244ENST00000453337 MFSD2BA6NFX1 497 aa9.76□□□□□ -0.85
HLA-DPA1-244ENST00000453337 AGPAT2O15120 278 aa9.76□□□□□ -0.85
HLA-DPA1-244ENST00000453337 OR10J1P30954 320 aa9.76□□□□□ -0.85
HLA-DPA1-244ENST00000453337 RPL29P47914 159 aaKnown RBP9.76□□□□□ -0.85
HLA-DPA1-244ENST00000453337 RUNX1Q01196 453 aa9.76□□□□□ -0.85
HLA-DPA1-244ENST00000453337 IFITM2Q01629 132 aa9.76□□□□□ -0.85
HLA-DPA1-244ENST00000453337 Q56UQ5 140 aa9.76□□□□□ -0.85
HLA-DPA1-244ENST00000453337 ZNF767PQ75MW2 155 aa9.76□□□□□ -0.85
HLA-DPA1-244ENST00000453337 TMED6Q8WW62 240 aa9.76□□□□□ -0.85
HLA-DPA1-244ENST00000453337 RSG1Q9BU20 258 aa9.76□□□□□ -0.85
HLA-DPA1-244ENST00000453337 KLK15Q9H2R5 256 aa9.76□□□□□ -0.85
HLA-DPA1-244ENST00000453337 MRPL36Q9P0J6 103 aaKnown RBP9.76□□□□□ -0.85
HLA-DPA1-244ENST00000453337 UBQLN2Q9UHD9 624 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms