RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 LY6G6DO95868 133 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 MT-CO2P00403 227 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 IGF1P05019 195 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 LINC00869P0C866 280 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 PPIFP30405 207 aaKnown RBP4.7□□□□□ -1.66
SDC4P-201ENST00000453285 OPRK1P41145 380 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 RPL29P47914 159 aaKnown RBP4.7□□□□□ -1.66
SDC4P-201ENST00000453285 FHITP49789 147 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 RAB5CP51148 216 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 PRR20EP86478 221 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 PRR20CP86479 221 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 PRR20DP86480 221 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 PRR20BP86481 221 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 PRR20AP86496 221 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 ZNF726P1Q15940 193 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 NDUFA5Q16718 116 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 MIC13Q5XKP0 118 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 ETFRF1Q6IPR1 90 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 TEPPQ6URK8 271 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 UNQ5815/PRO19632Q6UWF5 114 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 SPNS3Q6ZMD2 512 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 Q6ZRG5 221 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 TMEM116Q8NCL8 245 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 OR1L6Q8NGR2 347 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 NPIPB3Q92617 1050 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 SLC35E1Q96K37 410 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 TMUB1Q9BVT8 246 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 RPRMQ9NS64 109 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 VPREB3Q9UKI3 123 aa4.7□□□□□ -1.66
SDC4P-201ENST00000453285 NF1P21359 2839 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 C2CD3Q4AC94 2353 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 NSD1Q96L73 2696 aaPredicted RBP4.69□□□□□ -1.66
SDC4P-201ENST00000453285 IGHV3-21A0A0B4J1V1 117 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 TRAV41A0A0B4J266 112 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 PSMB11A5LHX3 300 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 C17orf112F2Z3M2 114 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 F8W735 103 aaPredicted RBP4.69□□□□□ -1.66
SDC4P-201ENST00000453285 BRI3O95415 125 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 DEFA4P12838 97 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 GATA2P23769 480 aaPredicted RBP4.69□□□□□ -1.66
SDC4P-201ENST00000453285 OR10J1P30954 320 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 SRP14P37108 136 aaKnown RBP4.69□□□□□ -1.66
SDC4P-201ENST00000453285 CAMLGP49069 296 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 RND2P52198 227 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 RIPPLY3P57055 190 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 RAB2AP61019 212 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 BLOC1S1P78537 153 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 AKR1C1Q04828 323 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 ECSCRQ19T08 205 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 TMEM41BQ5BJD5 291 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 C9orf152Q5JTZ5 239 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 FFAR4Q5NUL3 377 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 AKR1C8PQ5T2L2 129 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 PXDC1Q5TGL8 231 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 SPSB3Q6PJ21 355 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 DPPA3Q6W0C5 159 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 SSX7Q7RTT5 188 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 SLC35E3Q7Z769 313 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 RPP25LQ8N5L8 163 aaKnown RBP4.69□□□□□ -1.66
SDC4P-201ENST00000453285 TMEM86BQ8N661 226 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 OR4X1Q8NH49 305 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 FAM213BQ8TBF2 198 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 MBD3L1Q8WWY6 194 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 ACY3Q96HD9 319 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 TRGV9Q99603 122 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 SCRT1Q9BWW7 348 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 GSX1Q9H4S2 264 aaPredicted RBP4.69□□□□□ -1.66
SDC4P-201ENST00000453285 TNFRSF19Q9NS68 423 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 LINC00527Q9UJ94 153 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 ZNF580Q9UK33 172 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 PXMP4Q9Y6I8 212 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 F8P00451 2351 aa4.69□□□□□ -1.66
SDC4P-201ENST00000453285 FN1P02751 2386 aaKnown RBP4.69□□□□□ -1.66
SDC4P-201ENST00000453285 TRAV1-1A0A0B4J248 108 aa4.68□□□□□ -1.66
SDC4P-201ENST00000453285 TCRBV4S1A1TA0A5B7 111 aa4.68□□□□□ -1.66
SDC4P-201ENST00000453285 BTBD17A6NE02 478 aa4.68□□□□□ -1.66
SDC4P-201ENST00000453285 MFSD2BA6NFX1 497 aa4.68□□□□□ -1.66
SDC4P-201ENST00000453285 TEX46H3BTG2 121 aa4.68□□□□□ -1.66
SDC4P-201ENST00000453285 AP4M1O00189 453 aa4.68□□□□□ -1.66
SDC4P-201ENST00000453285 CLN5O75503 358 aa4.68□□□□□ -1.66
SDC4P-201ENST00000453285 TSPAN9O75954 239 aa4.68□□□□□ -1.66
SDC4P-201ENST00000453285 OR2J3O76001 311 aa4.68□□□□□ -1.66
SDC4P-201ENST00000453285 TSPAN15O95858 294 aa4.68□□□□□ -1.66
SDC4P-201ENST00000453285 MBP02144 154 aa4.68□□□□□ -1.66
SDC4P-201ENST00000453285 IGLC1P0CG04 106 aa4.68□□□□□ -1.66
SDC4P-201ENST00000453285 FOSL1P15407 271 aa4.68□□□□□ -1.66
SDC4P-201ENST00000453285 HIST1H1BP16401 226 aaKnown RBP4.68□□□□□ -1.66
SDC4P-201ENST00000453285 M6PRP20645 277 aa4.68□□□□□ -1.66
SDC4P-201ENST00000453285 FCGR2BP31994 310 aaPredicted RBP4.68□□□□□ -1.66
SDC4P-201ENST00000453285 ELLP55199 621 aaPredicted RBP4.68□□□□□ -1.66
SDC4P-201ENST00000453285 CCL20P78556 96 aa4.68□□□□□ -1.66
SDC4P-201ENST00000453285 DEFA5Q01523 94 aa4.68□□□□□ -1.66
SDC4P-201ENST00000453285 CFHR3Q02985 330 aa4.68□□□□□ -1.66
SDC4P-201ENST00000453285 ZNF90Q03938 601 aa4.68□□□□□ -1.66
SDC4P-201ENST00000453285 GCSAMLQ5JQS6 135 aa4.68□□□□□ -1.66
SDC4P-201ENST00000453285 CYP2G1PQ6ZSU1 146 aa4.68□□□□□ -1.66
SDC4P-201ENST00000453285 COMMD7Q86VX2 200 aa4.68□□□□□ -1.66
SDC4P-201ENST00000453285 Q8N2B8 174 aa4.68□□□□□ -1.66
SDC4P-201ENST00000453285 STPG3Q8N7X2 389 aa4.68□□□□□ -1.66
SDC4P-201ENST00000453285 ZNF709Q8N972 641 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms