RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 KALRNO60229 2985 aa2.58□□□□□ -2
HMGB1P48-201ENST00000446155 BRWD1Q9NSI6 2320 aa2.58□□□□□ -2
HMGB1P48-201ENST00000446155 OTOFQ9HC10 1997 aa2.58□□□□□ -2
HMGB1P48-201ENST00000446155 UBR5O95071 2799 aaPredicted RBP2.58□□□□□ -2
HMGB1P48-201ENST00000446155 SCN7AQ01118 1682 aa2.58□□□□□ -2
HMGB1P48-201ENST00000446155 A8MWP6 167 aa2.58□□□□□ -2
HMGB1P48-201ENST00000446155 SLC17A3O00476 420 aa2.58□□□□□ -2
HMGB1P48-201ENST00000446155 ATG12O94817 140 aa2.58□□□□□ -2
HMGB1P48-201ENST00000446155 SERPINE1P05121 402 aa2.58□□□□□ -2
HMGB1P48-201ENST00000446155 HSPE1P61604 102 aaKnown RBP2.58□□□□□ -2
HMGB1P48-201ENST00000446155 FKBP1AP62942 108 aaKnown RBP2.58□□□□□ -2
HMGB1P48-201ENST00000446155 LGALSLQ3ZCW2 172 aaPredicted RBP2.58□□□□□ -2
HMGB1P48-201ENST00000446155 C3orf33Q6P1S2 294 aa2.58□□□□□ -2
HMGB1P48-201ENST00000446155 RASL11AQ6T310 242 aa2.58□□□□□ -2
HMGB1P48-201ENST00000446155 SPINT4Q6UDR6 99 aa2.58□□□□□ -2
HMGB1P48-201ENST00000446155 PACRGLQ8N7B6 248 aa2.58□□□□□ -2
HMGB1P48-201ENST00000446155 GDPD1Q8N9F7 314 aa2.58□□□□□ -2
HMGB1P48-201ENST00000446155 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.58□□□□□ -2
HMGB1P48-201ENST00000446155 OR11H6Q8NGC7 330 aa2.58□□□□□ -2
HMGB1P48-201ENST00000446155 GNPDA2Q8TDQ7 276 aa2.58□□□□□ -2
HMGB1P48-201ENST00000446155 UPK3BQ9BT76 320 aa2.58□□□□□ -2
HMGB1P48-201ENST00000446155 SCRT1Q9BWW7 348 aa2.58□□□□□ -2
HMGB1P48-201ENST00000446155 SMPXQ9UHP9 88 aa2.58□□□□□ -2
HMGB1P48-201ENST00000446155 SNX12Q9UMY4 172 aa2.58□□□□□ -2
HMGB1P48-201ENST00000446155 ZNF835Q9Y2P0 537 aa2.58□□□□□ -2
HMGB1P48-201ENST00000446155 KLK5Q9Y337 293 aaPredicted RBP2.58□□□□□ -2
HMGB1P48-201ENST00000446155 UFC1Q9Y3C8 167 aa2.58□□□□□ -2
HMGB1P48-201ENST00000446155 ROCK2O75116 1388 aaKnown RBP2.58□□□□□ -2
HMGB1P48-201ENST00000446155 NLRC5Q86WI3 1866 aa2.58□□□□□ -2
HMGB1P48-201ENST00000446155 COL1A1P02452 1464 aaPredicted RBP2.58□□□□□ -2
HMGB1P48-201ENST00000446155 DMXL2Q8TDJ6 3036 aa2.58□□□□□ -2
HMGB1P48-201ENST00000446155 IGSF10Q6WRI0 2623 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 DUOX1Q9NRD9 1551 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 ZSWIM8A7E2V4 1837 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 TRBV20OR9-2A0A075B6H5 130 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 A0A0J9YY10 115 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 A0A1B0GV72 72 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 A0A1B0GW54 56 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 A0A1B0GX78 115 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 GNG14A0A1W2PPG7 69 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 A0A1W2PQ67 120 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 DHRS12A0PJE2 317 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 IGSF23A1L1A6 192 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 RPL36A-HNRNPH2H7BZ11 118 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 K7EM74 188 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 UBE2L6O14933 153 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 PLA2G10O15496 165 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 SLC25A16P16260 332 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 GNG3P63215 75 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 DHRS2Q13268 280 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 CST6Q15828 149 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 LGALS9BQ3B8N2 356 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 ZNF660Q6AZW8 331 aaPredicted RBP2.57□□□□□ -2
HMGB1P48-201ENST00000446155 LGALS9CQ6DKI2 356 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 ZFAND6Q6FIF0 208 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 IGFL3Q6UXB1 125 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 TMPPEQ6ZT21 453 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 SMIM20Q8N5G0 67 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 TBC1D19Q8N5T2 526 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 OR11H1Q8NG94 326 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 OR13C6PQ8NH95 151 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 FNDC9Q8TBE3 224 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 STARD4Q96DR4 205 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 ERMAPQ96PL5 475 aaPredicted RBP2.57□□□□□ -2
HMGB1P48-201ENST00000446155 NMNAT3Q96T66 252 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 MGLLQ99685 303 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 PYCARDQ9ULZ3 195 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 ZNF443Q9Y2A4 671 aaPredicted RBP2.57□□□□□ -2
HMGB1P48-201ENST00000446155 TMEM56-RWDD3S4R434 201 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 ROBO3Q96MS0 1386 aa2.57□□□□□ -2
HMGB1P48-201ENST00000446155 ITPR3Q14573 2671 aa2.56□□□□□ -2
HMGB1P48-201ENST00000446155 LOC400499M0QZD8 3231 aa2.56□□□□□ -2
HMGB1P48-201ENST00000446155 MYO9AB2RTY4 2548 aa2.56□□□□□ -2
HMGB1P48-201ENST00000446155 PIRO00625 290 aa2.56□□□□□ -2
HMGB1P48-201ENST00000446155 ZNF286BP0CG31 522 aa2.56□□□□□ -2
HMGB1P48-201ENST00000446155 ZNF705DP0CH99 300 aaPredicted RBP2.56□□□□□ -2
HMGB1P48-201ENST00000446155 IL9P15248 144 aa2.56□□□□□ -2
HMGB1P48-201ENST00000446155 BIKQ13323 160 aa2.56□□□□□ -2
HMGB1P48-201ENST00000446155 EIF4EBP1Q13541 118 aaPredicted RBP2.56□□□□□ -2
HMGB1P48-201ENST00000446155 C12orf74Q32Q52 190 aa2.56□□□□□ -2
HMGB1P48-201ENST00000446155 SMARCD3Q6STE5 483 aa2.56□□□□□ -2
HMGB1P48-201ENST00000446155 Q6ZS49 121 aa2.56□□□□□ -2
HMGB1P48-201ENST00000446155 GOLT1AQ6ZVE7 132 aa2.56□□□□□ -2
HMGB1P48-201ENST00000446155 SPATA12Q7Z6I5 190 aa2.56□□□□□ -2
HMGB1P48-201ENST00000446155 ZNF283Q8N7M2 679 aa2.56□□□□□ -2
HMGB1P48-201ENST00000446155 ZNF709Q8N972 641 aa2.56□□□□□ -2
HMGB1P48-201ENST00000446155 OR13C8Q8NGS7 320 aa2.56□□□□□ -2
HMGB1P48-201ENST00000446155 OR10A6Q8NH74 314 aa2.56□□□□□ -2
HMGB1P48-201ENST00000446155 RPS4Y2Q8TD47 263 aa2.56□□□□□ -2
HMGB1P48-201ENST00000446155 ZHX1-C8orf76Q96EF9 292 aa2.56□□□□□ -2
HMGB1P48-201ENST00000446155 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
HMGB1P48-201ENST00000446155 WDR61Q9GZS3 305 aaKnown RBP2.56□□□□□ -2
HMGB1P48-201ENST00000446155 ABCG5Q9H222 651 aa2.56□□□□□ -2
HMGB1P48-201ENST00000446155 BIN3Q9NQY0 253 aa2.56□□□□□ -2
HMGB1P48-201ENST00000446155 CISHQ9NSE2 258 aa2.56□□□□□ -2
HMGB1P48-201ENST00000446155 FBXL12Q9NXK8 326 aa2.56□□□□□ -2
HMGB1P48-201ENST00000446155 CFAP46Q8IYW2 2715 aa2.56□□□□□ -2
HMGB1P48-201ENST00000446155 COL4A6Q14031 1691 aa2.56□□□□□ -2
HMGB1P48-201ENST00000446155 TECTAO75443 2155 aa2.56□□□□□ -2
HMGB1P48-201ENST00000446155 IGF2RP11717 2491 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms