RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 FAM223BA6NKX1 122 aa6.88□□□□□ -1.31
FXR1-203ENST00000445140 HMSDA8MTL9 139 aa6.88□□□□□ -1.31
FXR1-203ENST00000445140 E5RGE8 158 aa6.88□□□□□ -1.31
FXR1-203ENST00000445140 ATP6V0E1O15342 81 aa6.88□□□□□ -1.31
FXR1-203ENST00000445140 ACTL6BO94805 426 aa6.88□□□□□ -1.31
FXR1-203ENST00000445140 NUTF2P61970 127 aaKnown RBP6.88□□□□□ -1.31
FXR1-203ENST00000445140 BAXQ07812 192 aa6.88□□□□□ -1.31
FXR1-203ENST00000445140 PLGLAQ15195 96 aa6.88□□□□□ -1.31
FXR1-203ENST00000445140 LY6EQ16553 131 aa6.88□□□□□ -1.31
FXR1-203ENST00000445140 FAM223AQ8IWN6 122 aa6.88□□□□□ -1.31
FXR1-203ENST00000445140 TCEAL7Q9BRU2 100 aa6.88□□□□□ -1.31
FXR1-203ENST00000445140 PARD6GQ9BYG4 376 aaPredicted RBP6.88□□□□□ -1.31
FXR1-203ENST00000445140 NSG2Q9Y328 171 aa6.88□□□□□ -1.31
FXR1-203ENST00000445140 IGLV11-55A0A075B6I3 123 aa6.88□□□□□ -1.31
FXR1-203ENST00000445140 PRSS46E5RG02 174 aa6.88□□□□□ -1.31
FXR1-203ENST00000445140 RNASE2P10153 161 aaKnown RBP6.88□□□□□ -1.31
FXR1-203ENST00000445140 CD24P25063 80 aa6.88□□□□□ -1.31
FXR1-203ENST00000445140 SUB1P53999 127 aaKnown RBP eCLIP6.88□□□□□ -1.31
FXR1-203ENST00000445140 PAX9P55771 341 aa6.88□□□□□ -1.31
FXR1-203ENST00000445140 ERHP84090 104 aaKnown RBP6.88□□□□□ -1.31
FXR1-203ENST00000445140 RUNX1Q01196 453 aa6.88□□□□□ -1.31
FXR1-203ENST00000445140 PJVKQ0ZLH3 352 aa6.88□□□□□ -1.31
FXR1-203ENST00000445140 USF2Q15853 346 aaPredicted RBP6.88□□□□□ -1.31
FXR1-203ENST00000445140 OR2T6Q8NHC8 308 aa6.88□□□□□ -1.31
FXR1-203ENST00000445140 VN1R17PQ8TDU5 208 aa6.88□□□□□ -1.31
FXR1-203ENST00000445140 CLCC1Q96S66 551 aa6.88□□□□□ -1.31
FXR1-203ENST00000445140 TXN2Q99757 166 aa6.88□□□□□ -1.31
FXR1-203ENST00000445140 HIPK2Q9H2X6 1198 aa6.88□□□□□ -1.31
FXR1-203ENST00000445140 LYRM2Q9NU23 88 aaPredicted RBP6.88□□□□□ -1.31
FXR1-203ENST00000445140 CLPSL1A2RUU4 121 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 C5orf51A6NDU8 294 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 COLCA2A8K830 154 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 PAX6P26367 422 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 DDTP30046 118 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 WT1-ASQ06250 92 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 HNF4GQ14541 408 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 ZNF345Q14585 488 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 VWC2Q2TAL6 325 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 ETFRF1Q6IPR1 90 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 CACNG8Q8WXS5 425 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 USMG5Q96IX5 58 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 FBXO7Q9Y3I1 522 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 TNCP24821 2201 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 TRAV14DV4A0A0A6YYC5 116 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 FAM181BA6NEQ2 426 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 PMS2P5A8MQ11 134 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 ARPC5O15511 151 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 PSMB8P28062 276 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 PROK1P58294 105 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 SLC35B1P78383 322 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 FOXL1Q12952 345 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 CXorf66Q5JRM2 361 aaPredicted RBP6.87□□□□□ -1.31
FXR1-203ENST00000445140 SVBPQ8N300 66 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 PPP1R1CQ8WVI7 109 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 C22orf15Q8WYQ4 148 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 BSCL2Q96G97 398 aaPredicted RBP6.87□□□□□ -1.31
FXR1-203ENST00000445140 AQP10Q96PS8 301 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 GPR61Q9BZJ8 451 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 ENY2Q9NPA8 101 aa6.87□□□□□ -1.31
FXR1-203ENST00000445140 MXRA5Q9NR99 2828 aa6.86□□□□□ -1.31
FXR1-203ENST00000445140 C15orf62A8K5M9 175 aa6.86□□□□□ -1.31
FXR1-203ENST00000445140 E7EUB6 86 aa6.86□□□□□ -1.31
FXR1-203ENST00000445140 CCSO14618 274 aa6.86□□□□□ -1.31
FXR1-203ENST00000445140 RAB4BP61018 213 aa6.86□□□□□ -1.31
FXR1-203ENST00000445140 RAB2AP61019 212 aa6.86□□□□□ -1.31
FXR1-203ENST00000445140 RPL23AP62750 156 aaKnown RBP6.86□□□□□ -1.31
FXR1-203ENST00000445140 BLCAPP62952 87 aa6.86□□□□□ -1.31
FXR1-203ENST00000445140 C11orf87Q6NUJ2 197 aa6.86□□□□□ -1.31
FXR1-203ENST00000445140 SLC24A4Q8NFF2 622 aa6.86□□□□□ -1.31
FXR1-203ENST00000445140 RNF126Q9BV68 326 aa6.86□□□□□ -1.31
FXR1-203ENST00000445140 ARL6Q9H0F7 186 aa6.86□□□□□ -1.31
FXR1-203ENST00000445140 MAST4O15021 2626 aa6.86□□□□□ -1.31
FXR1-203ENST00000445140 IFITM10A6NMD0 228 aa6.86□□□□□ -1.31
FXR1-203ENST00000445140 CLEC3BP05452 202 aa6.86□□□□□ -1.31
FXR1-203ENST00000445140 NPSP0C0P6 89 aa6.86□□□□□ -1.31
FXR1-203ENST00000445140 RIPPLY3P57055 190 aa6.86□□□□□ -1.31
FXR1-203ENST00000445140 DLK1P80370 383 aa6.86□□□□□ -1.31
FXR1-203ENST00000445140 SRSF3P84103 164 aaKnown RBP6.86□□□□□ -1.31
FXR1-203ENST00000445140 RAB32Q13637 225 aa6.86□□□□□ -1.31
FXR1-203ENST00000445140 ETV3LQ6ZN32 361 aa6.86□□□□□ -1.31
FXR1-203ENST00000445140 FANCD2OSQ96PS1 177 aa6.86□□□□□ -1.31
FXR1-203ENST00000445140 SEPSECSQ9HD40 501 aaKnown RBP6.86□□□□□ -1.31
FXR1-203ENST00000445140 GAR1Q9NY12 217 aaKnown RBP6.86□□□□□ -1.31
FXR1-203ENST00000445140 TMEM218A2RU14 115 aa6.85□□□□□ -1.31
FXR1-203ENST00000445140 MSGN1A6NI15 193 aa6.85□□□□□ -1.31
FXR1-203ENST00000445140 CNIH1O95406 144 aa6.85□□□□□ -1.31
FXR1-203ENST00000445140 IFNA17P01571 189 aa6.85□□□□□ -1.31
FXR1-203ENST00000445140 NPY1RP25929 384 aa6.85□□□□□ -1.31
FXR1-203ENST00000445140 S100A11P31949 105 aa6.85□□□□□ -1.31
FXR1-203ENST00000445140 GAMTQ14353 236 aa6.85□□□□□ -1.31
FXR1-203ENST00000445140 ATP6V1FQ16864 119 aa6.85□□□□□ -1.31
FXR1-203ENST00000445140 TMUB2Q71RG4 321 aa6.85□□□□□ -1.31
FXR1-203ENST00000445140 NECAP1Q8NC96 275 aa6.85□□□□□ -1.31
FXR1-203ENST00000445140 LINC01006Q8NI28 216 aa6.85□□□□□ -1.31
FXR1-203ENST00000445140 P2RX4Q99571 388 aa6.85□□□□□ -1.31
FXR1-203ENST00000445140 SLC25A31Q9H0C2 315 aa6.85□□□□□ -1.31
FXR1-203ENST00000445140 PARP11Q9NR21 331 aa6.85□□□□□ -1.31
FXR1-203ENST00000445140 THYN1Q9P016 225 aa6.85□□□□□ -1.31
FXR1-203ENST00000445140 CELSR1Q9NYQ6 3014 aa6.85□□□□□ -1.31
FXR1-203ENST00000445140 TLN2Q9Y4G6 2542 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 9557.7 ms