RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 RPP30P78346 268 aaKnown RBP7.25□□□□□ -1.25
LINC00642-203ENST00000444942 ATP6V1FQ16864 119 aa7.25□□□□□ -1.25
LINC00642-203ENST00000444942 DPPA3Q6W0C5 159 aa7.25□□□□□ -1.25
LINC00642-203ENST00000444942 LCNL1Q6ZST4 164 aa7.25□□□□□ -1.25
LINC00642-203ENST00000444942 SSX9Q7RTT3 188 aa7.25□□□□□ -1.25
LINC00642-203ENST00000444942 LFNGQ8NES3 379 aa7.25□□□□□ -1.25
LINC00642-203ENST00000444942 OR5AN1Q8NGI8 311 aa7.25□□□□□ -1.25
LINC00642-203ENST00000444942 FLYWCH2Q96CP2 140 aaKnown RBP7.25□□□□□ -1.25
LINC00642-203ENST00000444942 QTRT1Q9BXR0 403 aaKnown RBP7.25□□□□□ -1.25
LINC00642-203ENST00000444942 PARD6GQ9BYG4 376 aaPredicted RBP7.25□□□□□ -1.25
LINC00642-203ENST00000444942 WNT10AQ9GZT5 417 aa7.25□□□□□ -1.25
LINC00642-203ENST00000444942 TPSG1Q9NRR2 321 aa7.25□□□□□ -1.25
LINC00642-203ENST00000444942 TMEM140Q9NV12 185 aa7.25□□□□□ -1.25
LINC00642-203ENST00000444942 METTL1Q9UBP6 276 aaKnown RBP7.25□□□□□ -1.25
LINC00642-203ENST00000444942 TCRBV4S1A1TA0A5B7 111 aa7.24□□□□□ -1.25
LINC00642-203ENST00000444942 TMEM218A2RU14 115 aa7.24□□□□□ -1.25
LINC00642-203ENST00000444942 RRHO14718 337 aa7.24□□□□□ -1.25
LINC00642-203ENST00000444942 IGHG2P01859 326 aa7.24□□□□□ -1.25
LINC00642-203ENST00000444942 APOC3P02656 99 aa7.24□□□□□ -1.25
LINC00642-203ENST00000444942 OR8U8P0C7N1 319 aa7.24□□□□□ -1.25
LINC00642-203ENST00000444942 SPCS3P61009 180 aa7.24□□□□□ -1.25
LINC00642-203ENST00000444942 RAB2AP61019 212 aa7.24□□□□□ -1.25
LINC00642-203ENST00000444942 GNB1P62873 340 aa7.24□□□□□ -1.25
LINC00642-203ENST00000444942 RUNX1Q01196 453 aa7.24□□□□□ -1.25
LINC00642-203ENST00000444942 TAGLNQ01995 201 aaKnown RBP7.24□□□□□ -1.25
LINC00642-203ENST00000444942 EGFEM1PQ0D2K5 195 aa7.24□□□□□ -1.25
LINC00642-203ENST00000444942 PSG5Q15238 335 aa7.24□□□□□ -1.25
LINC00642-203ENST00000444942 C5orf64Q2M2E5 130 aa7.24□□□□□ -1.25
LINC00642-203ENST00000444942 AARDQ4LEZ3 155 aa7.24□□□□□ -1.25
LINC00642-203ENST00000444942 OR8G2PQ6IF36 304 aa7.24□□□□□ -1.25
LINC00642-203ENST00000444942 HAPLN4Q86UW8 402 aa7.24□□□□□ -1.25
LINC00642-203ENST00000444942 PDPNQ86YL7 162 aa7.24□□□□□ -1.25
LINC00642-203ENST00000444942 OR4F17Q8NGA8 305 aa7.24□□□□□ -1.25
LINC00642-203ENST00000444942 OR4X2Q8NGF9 303 aa7.24□□□□□ -1.25
LINC00642-203ENST00000444942 OR52E5Q8NH55 327 aa7.24□□□□□ -1.25
LINC00642-203ENST00000444942 LYPD6BQ8NI32 183 aa7.24□□□□□ -1.25
LINC00642-203ENST00000444942 PINX1Q96BK5 328 aaKnown RBP7.24□□□□□ -1.25
LINC00642-203ENST00000444942 HARBI1Q96MB7 349 aa7.24□□□□□ -1.25
LINC00642-203ENST00000444942 OR4C12Q96R67 309 aa7.24□□□□□ -1.25
LINC00642-203ENST00000444942 OR4F4Q96R69 305 aa7.24□□□□□ -1.25
LINC00642-203ENST00000444942 AIFM2Q9BRQ8 373 aa7.24□□□□□ -1.25
LINC00642-203ENST00000444942 PSMG3Q9BT73 122 aaPredicted RBP7.24□□□□□ -1.25
LINC00642-203ENST00000444942 FAM103A1Q9BTL3 118 aaKnown RBP7.24□□□□□ -1.25
LINC00642-203ENST00000444942 TMEM147Q9BVK8 224 aa7.24□□□□□ -1.25
LINC00642-203ENST00000444942 IGHV7-81A0A0B4J1V7 117 aa7.23□□□□□ -1.25
LINC00642-203ENST00000444942 UBE2L5PA0A1B0GUS4 154 aa7.23□□□□□ -1.25
LINC00642-203ENST00000444942 C15orf61A6NNL5 157 aa7.23□□□□□ -1.25
LINC00642-203ENST00000444942 G3V318 75 aa7.23□□□□□ -1.25
LINC00642-203ENST00000444942 AP4M1O00189 453 aa7.23□□□□□ -1.25
LINC00642-203ENST00000444942 AGPAT2O15120 278 aa7.23□□□□□ -1.25
LINC00642-203ENST00000444942 ATP6V0E1O15342 81 aa7.23□□□□□ -1.25
LINC00642-203ENST00000444942 SCO1O75880 301 aa7.23□□□□□ -1.25
LINC00642-203ENST00000444942 NDUFA3O95167 84 aa7.23□□□□□ -1.25
LINC00642-203ENST00000444942 CA2P00918 260 aa7.23□□□□□ -1.25
LINC00642-203ENST00000444942 HOXA1P49639 335 aaPredicted RBP7.23□□□□□ -1.25
LINC00642-203ENST00000444942 DEFA5Q01523 94 aa7.23□□□□□ -1.25
LINC00642-203ENST00000444942 AKR1C1Q04828 323 aa7.23□□□□□ -1.25
LINC00642-203ENST00000444942 ARL16Q0P5N6 197 aa7.23□□□□□ -1.25
LINC00642-203ENST00000444942 POU2AF1Q16633 256 aa7.23□□□□□ -1.25
LINC00642-203ENST00000444942 ECSCRQ19T08 205 aa7.23□□□□□ -1.25
LINC00642-203ENST00000444942 TCTEX1D4Q5JR98 221 aa7.23□□□□□ -1.25
LINC00642-203ENST00000444942 ZFAND6Q6FIF0 208 aa7.23□□□□□ -1.25
LINC00642-203ENST00000444942 NPBQ8NG41 125 aa7.23□□□□□ -1.25
LINC00642-203ENST00000444942 OR10P1Q8NGE3 313 aa7.23□□□□□ -1.25
LINC00642-203ENST00000444942 PBDC1Q9BVG4 233 aa7.23□□□□□ -1.25
LINC00642-203ENST00000444942 WDR61Q9GZS3 305 aaKnown RBP7.23□□□□□ -1.25
LINC00642-203ENST00000444942 HIPK2Q9H2X6 1198 aa7.23□□□□□ -1.25
LINC00642-203ENST00000444942 TMEM231Q9H6L2 316 aa7.23□□□□□ -1.25
LINC00642-203ENST00000444942 MUC4Q99102 2169 aa7.22□□□□□ -1.25
LINC00642-203ENST00000444942 SRRM4A7MD48 611 aaKnown RBP7.22□□□□□ -1.25
LINC00642-203ENST00000444942 F8W036 122 aa7.22□□□□□ -1.25
LINC00642-203ENST00000444942 HBE1P02100 147 aa7.22□□□□□ -1.25
LINC00642-203ENST00000444942 APELAP0DMC3 54 aa7.22□□□□□ -1.25
LINC00642-203ENST00000444942 SNCAP37840 140 aa7.22□□□□□ -1.25
LINC00642-203ENST00000444942 FHITP49789 147 aa7.22□□□□□ -1.25
LINC00642-203ENST00000444942 SLC35B1P78383 322 aa7.22□□□□□ -1.25
LINC00642-203ENST00000444942 NDPQ00604 133 aa7.22□□□□□ -1.25
LINC00642-203ENST00000444942 PEA15Q15121 130 aa7.22□□□□□ -1.25
LINC00642-203ENST00000444942 SPINK9Q5DT21 86 aa7.22□□□□□ -1.25
LINC00642-203ENST00000444942 OR4A47Q6IF82 309 aa7.22□□□□□ -1.25
LINC00642-203ENST00000444942 C18orf65Q6ZTR6 163 aa7.22□□□□□ -1.25
LINC00642-203ENST00000444942 ZNF429Q86V71 674 aa7.22□□□□□ -1.25
LINC00642-203ENST00000444942 VKORC1L1Q8N0U8 176 aa7.22□□□□□ -1.25
LINC00642-203ENST00000444942 SUN5Q8TC36 379 aa7.22□□□□□ -1.25
LINC00642-203ENST00000444942 WIPF2Q8TF74 440 aaPredicted RBP7.22□□□□□ -1.25
LINC00642-203ENST00000444942 RHOVQ96L33 236 aa7.22□□□□□ -1.25
LINC00642-203ENST00000444942 ENY2Q9NPA8 101 aa7.22□□□□□ -1.25
LINC00642-203ENST00000444942 HEYLQ9NQ87 328 aaPredicted RBP7.22□□□□□ -1.25
LINC00642-203ENST00000444942 UQCC1Q9NVA1 299 aa7.22□□□□□ -1.25
LINC00642-203ENST00000444942 PRNDQ9UKY0 176 aa7.22□□□□□ -1.25
LINC00642-203ENST00000444942 FOXA2Q9Y261 457 aaPredicted RBP7.22□□□□□ -1.25
LINC00642-203ENST00000444942 FBXO7Q9Y3I1 522 aa7.22□□□□□ -1.25
LINC00642-203ENST00000444942 TIMM9Q9Y5J7 89 aa7.22□□□□□ -1.25
LINC00642-203ENST00000444942 ALMS1Q8TCU4 4167 aa7.22□□□□□ -1.25
LINC00642-203ENST00000444942 ADARB2-AS1A8MUL3 147 aa7.21□□□□□ -1.25
LINC00642-203ENST00000444942 CNIH1O95406 144 aa7.21□□□□□ -1.25
LINC00642-203ENST00000444942 IFNA10P01566 189 aa7.21□□□□□ -1.25
LINC00642-203ENST00000444942 IGLV2-23P01705 113 aa7.21□□□□□ -1.25
LINC00642-203ENST00000444942 HLA-DRB1P01911 266 aa7.21□□□□□ -1.25
LINC00642-203ENST00000444942 H2AFB1P0C5Y9 115 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms