RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 NXF2Q9GZY0 626 aaKnown RBP5.73□□□□□ -1.49
VPS50-204ENST00000438395 SCPEP1Q9HB40 452 aa5.73□□□□□ -1.49
VPS50-204ENST00000438395 RABAC1Q9UI14 185 aa5.73□□□□□ -1.49
VPS50-204ENST00000438395 ANAPC10Q9UM13 185 aa5.73□□□□□ -1.49
VPS50-204ENST00000438395 I3L2K1 104 aa5.72□□□□□ -1.49
VPS50-204ENST00000438395 CORTO00230 105 aa5.72□□□□□ -1.49
VPS50-204ENST00000438395 IFNA17P01571 189 aa5.72□□□□□ -1.49
VPS50-204ENST00000438395 IGHV3-48P01763 117 aa5.72□□□□□ -1.49
VPS50-204ENST00000438395 APOA1P02647 267 aa5.72□□□□□ -1.49
VPS50-204ENST00000438395 NAT1P18440 290 aa5.72□□□□□ -1.49
VPS50-204ENST00000438395 EIF2B2P49770 351 aaKnown RBP5.72□□□□□ -1.49
VPS50-204ENST00000438395 SUB1P53999 127 aaKnown RBP eCLIP5.72□□□□□ -1.49
VPS50-204ENST00000438395 HSPE1P61604 102 aaKnown RBP5.72□□□□□ -1.49
VPS50-204ENST00000438395 TMEM187Q14656 261 aa5.72□□□□□ -1.49
VPS50-204ENST00000438395 TRIM16LQ309B1 348 aa5.72□□□□□ -1.49
VPS50-204ENST00000438395 RNASE10Q5GAN6 216 aaKnown RBP5.72□□□□□ -1.49
VPS50-204ENST00000438395 STHQ8IWL8 128 aa5.72□□□□□ -1.49
VPS50-204ENST00000438395 ZNF114Q8NC26 417 aa5.72□□□□□ -1.49
VPS50-204ENST00000438395 OR11H2Q8NH07 326 aa5.72□□□□□ -1.49
VPS50-204ENST00000438395 RRNAD1Q96FB5 475 aaKnown RBP5.72□□□□□ -1.49
VPS50-204ENST00000438395 GRAMD2BQ96HH9 432 aa5.72□□□□□ -1.49
VPS50-204ENST00000438395 OR10C1Q96KK4 312 aa5.72□□□□□ -1.49
VPS50-204ENST00000438395 METTL26Q96S19 204 aa5.72□□□□□ -1.49
VPS50-204ENST00000438395 C11orf68Q9H3H3 251 aaKnown RBP5.72□□□□□ -1.49
VPS50-204ENST00000438395 COMMD3Q9UBI1 195 aa5.72□□□□□ -1.49
VPS50-204ENST00000438395 A0A087WXM4 84 aa5.71□□□□□ -1.5
VPS50-204ENST00000438395 A0A1W2PS18 150 aa5.71□□□□□ -1.5
VPS50-204ENST00000438395 FAM25AB3EWG3 89 aa5.71□□□□□ -1.5
VPS50-204ENST00000438395 FAM25CB3EWG5 89 aa5.71□□□□□ -1.5
VPS50-204ENST00000438395 FAM25GB3EWG6 89 aa5.71□□□□□ -1.5
VPS50-204ENST00000438395 DFFBO76075 338 aa5.71□□□□□ -1.5
VPS50-204ENST00000438395 NPPCP23582 126 aa5.71□□□□□ -1.5
VPS50-204ENST00000438395 RPS19P39019 145 aaKnown RBP5.71□□□□□ -1.5
VPS50-204ENST00000438395 DEFB131AP59861 70 aa5.71□□□□□ -1.5
VPS50-204ENST00000438395 SPINK9Q5DT21 86 aa5.71□□□□□ -1.5
VPS50-204ENST00000438395 RNASE12Q5GAN4 147 aaKnown RBP5.71□□□□□ -1.5
VPS50-204ENST00000438395 ZNF600Q6ZNG1 722 aa5.71□□□□□ -1.5
VPS50-204ENST00000438395 RPP25LQ8N5L8 163 aaKnown RBP5.71□□□□□ -1.5
VPS50-204ENST00000438395 STXBP6Q8NFX7 210 aa5.71□□□□□ -1.5
VPS50-204ENST00000438395 GPX8Q8TED1 209 aa5.71□□□□□ -1.5
VPS50-204ENST00000438395 C2CD4CQ8TF44 421 aa5.71□□□□□ -1.5
VPS50-204ENST00000438395 ANAPC16Q96DE5 110 aa5.71□□□□□ -1.5
VPS50-204ENST00000438395 SEC22AQ96IW7 307 aa5.71□□□□□ -1.5
VPS50-204ENST00000438395 COPZ2Q9P299 210 aa5.71□□□□□ -1.5
VPS50-204ENST00000438395 PUS1Q9Y606 427 aaKnown RBP eCLIP5.71□□□□□ -1.5
VPS50-204ENST00000438395 TRAV2A0A0B4J234 112 aa5.7□□□□□ -1.5
VPS50-204ENST00000438395 IGHV3-66A0A0C4DH42 116 aa5.7□□□□□ -1.5
VPS50-204ENST00000438395 RPS10-NUDT3A0A1W2PQS6 291 aa5.7□□□□□ -1.5
VPS50-204ENST00000438395 M0QYG6 137 aa5.7□□□□□ -1.5
VPS50-204ENST00000438395 DEDDO75618 318 aa5.7□□□□□ -1.5
VPS50-204ENST00000438395 TNFAIP8O95379 198 aa5.7□□□□□ -1.5
VPS50-204ENST00000438395 TBPP20226 339 aa5.7□□□□□ -1.5
VPS50-204ENST00000438395 TGFBR1P36897 503 aa5.7□□□□□ -1.5
VPS50-204ENST00000438395 OPRK1P41145 380 aa5.7□□□□□ -1.5
VPS50-204ENST00000438395 UCP3P55916 312 aa5.7□□□□□ -1.5
VPS50-204ENST00000438395 TCTAP57738 103 aa5.7□□□□□ -1.5
VPS50-204ENST00000438395 NANOS2P60321 138 aaKnown RBP5.7□□□□□ -1.5
VPS50-204ENST00000438395 TMEM41BQ5BJD5 291 aa5.7□□□□□ -1.5
VPS50-204ENST00000438395 LEMD1Q68G75 181 aa5.7□□□□□ -1.5
VPS50-204ENST00000438395 LGALS9CQ6DKI2 356 aa5.7□□□□□ -1.5
VPS50-204ENST00000438395 MZT2AQ6P582 158 aa5.7□□□□□ -1.5
VPS50-204ENST00000438395 TOMM20LQ6UXN7 152 aa5.7□□□□□ -1.5
VPS50-204ENST00000438395 LYSMD2Q8IV50 215 aa5.7□□□□□ -1.5
VPS50-204ENST00000438395 CCDC71LQ8N9Z2 235 aa5.7□□□□□ -1.5
VPS50-204ENST00000438395 ST8SIA2Q92186 375 aa5.7□□□□□ -1.5
VPS50-204ENST00000438395 AP3S1Q92572 193 aa5.7□□□□□ -1.5
VPS50-204ENST00000438395 TMEM230Q96A57 120 aa5.7□□□□□ -1.5
VPS50-204ENST00000438395 ZNF486Q96H40 463 aaPredicted RBP5.7□□□□□ -1.5
VPS50-204ENST00000438395 MS4A6AQ9H2W1 248 aa5.7□□□□□ -1.5
VPS50-204ENST00000438395 HYDINQ4G0P3 5121 aa5.7□□□□□ -1.5
VPS50-204ENST00000438395 DEFB4AO15263 64 aa5.69□□□□□ -1.5
VPS50-204ENST00000438395 PPP5CP53041 499 aa5.69□□□□□ -1.5
VPS50-204ENST00000438395 PIGPP57054 158 aa5.69□□□□□ -1.5
VPS50-204ENST00000438395 KRTAP10-2P60368 255 aa5.69□□□□□ -1.5
VPS50-204ENST00000438395 RND3P61587 244 aa5.69□□□□□ -1.5
VPS50-204ENST00000438395 IZUMO4Q1ZYL8 232 aa5.69□□□□□ -1.5
VPS50-204ENST00000438395 SCGB2B2Q4G0G5 96 aa5.69□□□□□ -1.5
VPS50-204ENST00000438395 ARRDC1Q8N5I2 433 aa5.69□□□□□ -1.5
VPS50-204ENST00000438395 ZFAND1Q8TCF1 268 aa5.69□□□□□ -1.5
VPS50-204ENST00000438395 C15orf40Q8WUR7 153 aa5.69□□□□□ -1.5
VPS50-204ENST00000438395 YIPF6Q96EC8 236 aa5.69□□□□□ -1.5
VPS50-204ENST00000438395 ZNF414Q96IQ9 312 aa5.69□□□□□ -1.5
VPS50-204ENST00000438395 VSIRQ9H7M9 311 aa5.69□□□□□ -1.5
VPS50-204ENST00000438395 TRAV30A0A087WSZ9 112 aa5.68□□□□□ -1.5
VPS50-204ENST00000438395 C3orf85A0A1B0GTC6 90 aa5.68□□□□□ -1.5
VPS50-204ENST00000438395 HELTA6NFD8 242 aa5.68□□□□□ -1.5
VPS50-204ENST00000438395 IGLL5B9A064 214 aa5.68□□□□□ -1.5
VPS50-204ENST00000438395 C11orf94C9JXX5 98 aa5.68□□□□□ -1.5
VPS50-204ENST00000438395 HPGDSO60760 199 aa5.68□□□□□ -1.5
VPS50-204ENST00000438395 B3GALNT1O75752 331 aa5.68□□□□□ -1.5
VPS50-204ENST00000438395 IGKV1-39P01597 117 aa5.68□□□□□ -1.5
VPS50-204ENST00000438395 IGKV1D-39P04432 117 aa5.68□□□□□ -1.5
VPS50-204ENST00000438395 ZNF688P0C7X2 276 aa5.68□□□□□ -1.5
VPS50-204ENST00000438395 SPP1P10451 314 aa5.68□□□□□ -1.5
VPS50-204ENST00000438395 P2RY1P47900 373 aa5.68□□□□□ -1.5
VPS50-204ENST00000438395 RORCP51449 518 aa5.68□□□□□ -1.5
VPS50-204ENST00000438395 VBP1P61758 197 aa5.68□□□□□ -1.5
VPS50-204ENST00000438395 NCS1P62166 190 aa5.68□□□□□ -1.5
VPS50-204ENST00000438395 ACTL10Q5JWF8 245 aa5.68□□□□□ -1.5
VPS50-204ENST00000438395 FAM90A2PQ658T7 463 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms