RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 ETFRF1Q6IPR1 90 aa8.86□□□□□ -0.99
LINC00539-203ENST00000434601 TTC9CQ8N5M4 171 aa8.86□□□□□ -0.99
LINC00539-203ENST00000434601 LFNGQ8NES3 379 aa8.86□□□□□ -0.99
LINC00539-203ENST00000434601 CACNG8Q8WXS5 425 aa8.86□□□□□ -0.99
LINC00539-203ENST00000434601 MISP3Q96FF7 219 aa8.86□□□□□ -0.99
LINC00539-203ENST00000434601 SLC35E1Q96K37 410 aa8.86□□□□□ -0.99
LINC00539-203ENST00000434601 TMEM68Q96MH6 324 aa8.86□□□□□ -0.99
LINC00539-203ENST00000434601 PSMG3Q9BT73 122 aaPredicted RBP8.86□□□□□ -0.99
LINC00539-203ENST00000434601 RSG1Q9BU20 258 aa8.86□□□□□ -0.99
LINC00539-203ENST00000434601 WNT10AQ9GZT5 417 aa8.86□□□□□ -0.99
LINC00539-203ENST00000434601 TIMM9Q9Y5J7 89 aa8.86□□□□□ -0.99
LINC00539-203ENST00000434601 DMRT1Q9Y5R6 373 aa8.86□□□□□ -0.99
LINC00539-203ENST00000434601 CYB5BO43169 146 aa8.85□□□□□ -0.99
LINC00539-203ENST00000434601 MPDU1O75352 247 aa8.85□□□□□ -0.99
LINC00539-203ENST00000434601 IGHG2P01859 326 aa8.85□□□□□ -0.99
LINC00539-203ENST00000434601 SULT1A2P50226 295 aa8.85□□□□□ -0.99
LINC00539-203ENST00000434601 RAB14P61106 215 aa8.85□□□□□ -0.99
LINC00539-203ENST00000434601 CLLU1Q5K131 121 aa8.85□□□□□ -0.99
LINC00539-203ENST00000434601 UNQ5815/PRO19632Q6UWF5 114 aa8.85□□□□□ -0.99
LINC00539-203ENST00000434601 BTNL8Q6UX41 500 aa8.85□□□□□ -0.99
LINC00539-203ENST00000434601 TREML4Q6UXN2 200 aa8.85□□□□□ -0.99
LINC00539-203ENST00000434601 TMEM182Q6ZP80 229 aaPredicted RBP8.85□□□□□ -0.99
LINC00539-203ENST00000434601 SLC35E3Q7Z769 313 aa8.85□□□□□ -0.99
LINC00539-203ENST00000434601 TMEM86BQ8N661 226 aa8.85□□□□□ -0.99
LINC00539-203ENST00000434601 OR2G3Q8NGZ4 309 aa8.85□□□□□ -0.99
LINC00539-203ENST00000434601 FAM110DQ8TAY7 271 aaPredicted RBP8.85□□□□□ -0.99
LINC00539-203ENST00000434601 NPCDR1Q9BY65 106 aa8.85□□□□□ -0.99
LINC00539-203ENST00000434601 FNDC4Q9H6D8 234 aaPredicted RBP8.85□□□□□ -0.99
LINC00539-203ENST00000434601 NPVFQ9HCQ7 196 aa8.85□□□□□ -0.99
LINC00539-203ENST00000434601 TNFRSF19Q9NS68 423 aa8.85□□□□□ -0.99
LINC00539-203ENST00000434601 VWFP04275 2813 aa8.84□□□□□ -0.99
LINC00539-203ENST00000434601 IGLV11-55A0A075B6I3 123 aa8.84□□□□□ -0.99
LINC00539-203ENST00000434601 LINC01548A6NM66 108 aa8.84□□□□□ -0.99
LINC00539-203ENST00000434601 C17orf112F2Z3M2 114 aa8.84□□□□□ -0.99
LINC00539-203ENST00000434601 MT-CO2P00403 227 aa8.84□□□□□ -0.99
LINC00539-203ENST00000434601 BLCAPP62952 87 aa8.84□□□□□ -0.99
LINC00539-203ENST00000434601 GAMTQ14353 236 aa8.84□□□□□ -0.99
LINC00539-203ENST00000434601 AKIRIN2Q53H80 203 aa8.84□□□□□ -0.99
LINC00539-203ENST00000434601 TEPPQ6URK8 271 aa8.84□□□□□ -0.99
LINC00539-203ENST00000434601 TMEM144Q7Z5S9 345 aa8.84□□□□□ -0.99
LINC00539-203ENST00000434601 ZNF709Q8N972 641 aa8.84□□□□□ -0.99
LINC00539-203ENST00000434601 LRRC20Q8TCA0 184 aa8.84□□□□□ -0.99
LINC00539-203ENST00000434601 RNF141Q8WVD5 230 aa8.84□□□□□ -0.99
LINC00539-203ENST00000434601 DUX5Q96PT3 197 aa8.84□□□□□ -0.99
LINC00539-203ENST00000434601 MGST2Q99735 147 aa8.84□□□□□ -0.99
LINC00539-203ENST00000434601 LSM4Q9Y4Z0 139 aaKnown RBP8.84□□□□□ -0.99
LINC00539-203ENST00000434601 RFNGQ9Y644 331 aa8.84□□□□□ -0.99
LINC00539-203ENST00000434601 TRAV41A0A0B4J266 112 aa8.83□□□□□ -1
LINC00539-203ENST00000434601 A0A1B0GUS0 222 aa8.83□□□□□ -1
LINC00539-203ENST00000434601 UMAD1C9J7I0 102 aa8.83□□□□□ -1
LINC00539-203ENST00000434601 G3V318 75 aa8.83□□□□□ -1
LINC00539-203ENST00000434601 I3L2K1 104 aa8.83□□□□□ -1
LINC00539-203ENST00000434601 PRH1P02810 166 aa8.83□□□□□ -1
LINC00539-203ENST00000434601 IGF1P05019 195 aa8.83□□□□□ -1
LINC00539-203ENST00000434601 NMBP08949 121 aa8.83□□□□□ -1
LINC00539-203ENST00000434601 RAB5CP51148 216 aa8.83□□□□□ -1
LINC00539-203ENST00000434601 C19orf54Q5BKX5 351 aa8.83□□□□□ -1
LINC00539-203ENST00000434601 AKR1C8PQ5T2L2 129 aa8.83□□□□□ -1
LINC00539-203ENST00000434601 CENPVQ7Z7K6 275 aaPredicted RBP8.83□□□□□ -1
LINC00539-203ENST00000434601 OR5T1Q8NG75 326 aa8.83□□□□□ -1
LINC00539-203ENST00000434601 PCNPQ8WW12 178 aaKnown RBP8.83□□□□□ -1
LINC00539-203ENST00000434601 ACY3Q96HD9 319 aa8.83□□□□□ -1
LINC00539-203ENST00000434601 FANCD2OSQ96PS1 177 aa8.83□□□□□ -1
LINC00539-203ENST00000434601 GGTLC1Q9BX51 225 aa8.83□□□□□ -1
LINC00539-203ENST00000434601 KCNIP2Q9NS61 270 aa8.83□□□□□ -1
LINC00539-203ENST00000434601 PLA2G2EQ9NZK7 142 aa8.83□□□□□ -1
LINC00539-203ENST00000434601 ZNF580Q9UK33 172 aa8.83□□□□□ -1
LINC00539-203ENST00000434601 WNK1Q9H4A3 2382 aa8.83□□□□□ -1
LINC00539-203ENST00000434601 ZNF705EA8MWA4 302 aaPredicted RBP8.82□□□□□ -1
LINC00539-203ENST00000434601 K7EIM0 57 aa8.82□□□□□ -1
LINC00539-203ENST00000434601 AP4M1O00189 453 aa8.82□□□□□ -1
LINC00539-203ENST00000434601 SOX15O60248 233 aa8.82□□□□□ -1
LINC00539-203ENST00000434601 HIST1H1BP16401 226 aaKnown RBP8.82□□□□□ -1
LINC00539-203ENST00000434601 CAMLGP49069 296 aa8.82□□□□□ -1
LINC00539-203ENST00000434601 RND2P52198 227 aa8.82□□□□□ -1
LINC00539-203ENST00000434601 SERF2P84101 59 aa8.82□□□□□ -1
LINC00539-203ENST00000434601 RAB31Q13636 194 aa8.82□□□□□ -1
LINC00539-203ENST00000434601 MLANAQ16655 118 aa8.82□□□□□ -1
LINC00539-203ENST00000434601 THAP8Q8NA92 274 aa8.82□□□□□ -1
LINC00539-203ENST00000434601 OR2T6Q8NHC8 308 aa8.82□□□□□ -1
LINC00539-203ENST00000434601 NPFFR1Q9GZQ6 430 aa8.82□□□□□ -1
LINC00539-203ENST00000434601 THYN1Q9P016 225 aa8.82□□□□□ -1
LINC00539-203ENST00000434601 MRPL36Q9P0J6 103 aaKnown RBP8.82□□□□□ -1
LINC00539-203ENST00000434601 NOTCH1P46531 2555 aa8.82□□□□□ -1
LINC00539-203ENST00000434601 IGHV3-21A0A0B4J1V1 117 aa8.81□□□□□ -1
LINC00539-203ENST00000434601 AGPAT2O15120 278 aa8.81□□□□□ -1
LINC00539-203ENST00000434601 IGHV3-48P01763 117 aa8.81□□□□□ -1
LINC00539-203ENST00000434601 CRYBA1P05813 215 aa8.81□□□□□ -1
LINC00539-203ENST00000434601 ELLP55199 621 aaPredicted RBP8.81□□□□□ -1
LINC00539-203ENST00000434601 DEFA6Q01524 100 aa8.81□□□□□ -1
LINC00539-203ENST00000434601 KLK9Q2XQG4 91 aa8.81□□□□□ -1
LINC00539-203ENST00000434601 FFAR4Q5NUL3 377 aa8.81□□□□□ -1
LINC00539-203ENST00000434601 ACSM6Q6P461 480 aa8.81□□□□□ -1
LINC00539-203ENST00000434601 DPPA3Q6W0C5 159 aa8.81□□□□□ -1
LINC00539-203ENST00000434601 Q6ZS46 218 aa8.81□□□□□ -1
LINC00539-203ENST00000434601 TMEM116Q8NCL8 245 aa8.81□□□□□ -1
LINC00539-203ENST00000434601 NPIPB3Q92617 1050 aa8.81□□□□□ -1
LINC00539-203ENST00000434601 SAT2Q96F10 170 aaPredicted RBP8.81□□□□□ -1
LINC00539-203ENST00000434601 PRSS22Q9GZN4 317 aa8.81□□□□□ -1
LINC00539-203ENST00000434601 LINC00527Q9UJ94 153 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms