RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 PCSK5Q92824 1860 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 TGIF2-C20orf24A0A0A6YYL0 155 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 CD5P06127 495 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 BEND2Q8NDZ0 799 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 C8orf46Q8TAG6 207 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 AURKAIP1Q9NWT8 199 aaPredicted RBP9.53□□□□□ -0.88
PTCH1-208ENST00000430669 OTOGLQ3ZCN5 2332 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 A0A087X0M5 115 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 A0A1B0GX30 115 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 HAX1O00165 279 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 CGAP01215 116 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 CFHR2P36980 270 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 CIARTQ8N365 385 aaPredicted RBP9.53□□□□□ -0.88
PTCH1-208ENST00000430669 TRGV9Q99603 122 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 NDUFS8O00217 210 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 MYOD1P15172 320 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 ZNF137PP52743 207 aa9.53□□□□□ -0.88
PTCH1-208ENST00000430669 GOLT1AQ6ZVE7 132 aa9.52□□□□□ -0.88
PTCH1-208ENST00000430669 WNT10AQ9GZT5 417 aa9.52□□□□□ -0.88
PTCH1-208ENST00000430669 C5orf63A6NC05 138 aa9.52□□□□□ -0.89
PTCH1-208ENST00000430669 H0YJW9 148 aa9.52□□□□□ -0.89
PTCH1-208ENST00000430669 PLAUP00749 431 aa9.52□□□□□ -0.89
PTCH1-208ENST00000430669 CD55P08174 381 aa9.52□□□□□ -0.89
PTCH1-208ENST00000430669 PAX1P15863 534 aa9.52□□□□□ -0.89
PTCH1-208ENST00000430669 SMUG1Q53HV7 270 aa9.52□□□□□ -0.89
PTCH1-208ENST00000430669 BUB1B-PAK6H3BSN5 160 aa9.52□□□□□ -0.89
PTCH1-208ENST00000430669 J3QR89 54 aa9.52□□□□□ -0.89
PTCH1-208ENST00000430669 CCL20P78556 96 aa9.52□□□□□ -0.89
PTCH1-208ENST00000430669 HGFACQ04756 655 aa9.52□□□□□ -0.89
PTCH1-208ENST00000430669 Q8NFD4 153 aa9.52□□□□□ -0.89
PTCH1-208ENST00000430669 ANOS1P23352 680 aa9.52□□□□□ -0.89
PTCH1-208ENST00000430669 DPH3Q96FX2 82 aa9.52□□□□□ -0.89
PTCH1-208ENST00000430669 NPFFR1Q9GZQ6 430 aa9.52□□□□□ -0.89
PTCH1-208ENST00000430669 PRSS1P07477 247 aa9.52□□□□□ -0.89
PTCH1-208ENST00000430669 CDX1P47902 265 aaPredicted RBP9.52□□□□□ -0.89
PTCH1-208ENST00000430669 EFNB3Q15768 340 aa9.52□□□□□ -0.89
PTCH1-208ENST00000430669 ZNF524Q96C55 264 aa9.52□□□□□ -0.89
PTCH1-208ENST00000430669 SLC50A1Q9BRV3 221 aa9.52□□□□□ -0.89
PTCH1-208ENST00000430669 SDF2L1Q9HCN8 221 aa9.52□□□□□ -0.89
PTCH1-208ENST00000430669 CX3CL1P78423 397 aa9.51□□□□□ -0.89
PTCH1-208ENST00000430669 ADIPOQQ15848 244 aa9.51□□□□□ -0.89
PTCH1-208ENST00000430669 AGMATQ9BSE5 352 aa9.51□□□□□ -0.89
PTCH1-208ENST00000430669 C7orf69Q9H7B7 122 aa9.51□□□□□ -0.89
PTCH1-208ENST00000430669 GATA3P23771 443 aa9.51□□□□□ -0.89
PTCH1-208ENST00000430669 OR10AG1Q8NH19 301 aa9.51□□□□□ -0.89
PTCH1-208ENST00000430669 CENPVQ7Z7K6 275 aaPredicted RBP9.51□□□□□ -0.89
PTCH1-208ENST00000430669 TMEM183AQ8IXX5 376 aa9.51□□□□□ -0.89
PTCH1-208ENST00000430669 PGLYRP4Q96LB8 373 aa9.51□□□□□ -0.89
PTCH1-208ENST00000430669 DIRC3C9JPN6 131 aa9.51□□□□□ -0.89
PTCH1-208ENST00000430669 Q9H3A6 140 aa9.51□□□□□ -0.89
PTCH1-208ENST00000430669 TEX36Q5VZQ5 186 aa9.51□□□□□ -0.89
PTCH1-208ENST00000430669 TRBV7-1A0A0A6YYK4 115 aa9.51□□□□□ -0.89
PTCH1-208ENST00000430669 COQ2Q96H96 371 aa9.51□□□□□ -0.89
PTCH1-208ENST00000430669 IGHV1-3A0A0C4DH29 117 aa9.51□□□□□ -0.89
PTCH1-208ENST00000430669 C1orf147Q96MC9 270 aaPredicted RBP9.51□□□□□ -0.89
PTCH1-208ENST00000430669 MGPP08493 103 aa9.5□□□□□ -0.89
PTCH1-208ENST00000430669 EGR1P18146 543 aa9.5□□□□□ -0.89
PTCH1-208ENST00000430669 Q6ZSR3 168 aa9.5□□□□□ -0.89
PTCH1-208ENST00000430669 WDR83OSQ9Y284 106 aa9.5□□□□□ -0.89
PTCH1-208ENST00000430669 SCO2A0A1W2PP80 73 aa9.5□□□□□ -0.89
PTCH1-208ENST00000430669 TPTE2P1Q5T6R2 138 aa9.5□□□□□ -0.89
PTCH1-208ENST00000430669 PLXNB1O43157 2135 aa9.5□□□□□ -0.89
PTCH1-208ENST00000430669 VMO1Q7Z5L0 202 aa9.5□□□□□ -0.89
PTCH1-208ENST00000430669 TRAV20A0A0B4J274 112 aa9.5□□□□□ -0.89
PTCH1-208ENST00000430669 LY6EQ16553 131 aa9.5□□□□□ -0.89
PTCH1-208ENST00000430669 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.5□□□□□ -0.89
PTCH1-208ENST00000430669 RELBQ01201 579 aa9.5□□□□□ -0.89
PTCH1-208ENST00000430669 JMJD8Q96S16 334 aa9.5□□□□□ -0.89
PTCH1-208ENST00000430669 MOB4Q9Y3A3 225 aa9.5□□□□□ -0.89
PTCH1-208ENST00000430669 IGKV1-5P01602 117 aa9.5□□□□□ -0.89
PTCH1-208ENST00000430669 LY6DQ14210 128 aa9.5□□□□□ -0.89
PTCH1-208ENST00000430669 PSMG4Q5JS54 123 aa9.5□□□□□ -0.89
PTCH1-208ENST00000430669 WDR25Q64LD2 544 aaPredicted RBP9.5□□□□□ -0.89
PTCH1-208ENST00000430669 CYTL1Q9NRR1 136 aa9.5□□□□□ -0.89
PTCH1-208ENST00000430669 SRSF6Q13247 344 aaKnown RBP9.49□□□□□ -0.89
PTCH1-208ENST00000430669 TMEM167AQ8TBQ9 72 aa9.49□□□□□ -0.89
PTCH1-208ENST00000430669 SGK494Q96LW2 274 aa9.49□□□□□ -0.89
PTCH1-208ENST00000430669 TMEM14BQ9NUH8 114 aa9.49□□□□□ -0.89
PTCH1-208ENST00000430669 GPX1P07203 203 aa9.49□□□□□ -0.89
PTCH1-208ENST00000430669 RNF125Q96EQ8 232 aa9.49□□□□□ -0.89
PTCH1-208ENST00000430669 PRO3102Q9H379 93 aa9.49□□□□□ -0.89
PTCH1-208ENST00000430669 RPP21Q9H633 154 aaKnown RBP9.49□□□□□ -0.89
PTCH1-208ENST00000430669 IGKV3-7A0A075B6H7 116 aa9.49□□□□□ -0.89
PTCH1-208ENST00000430669 WFDC1Q9HC57 220 aa9.49□□□□□ -0.89
PTCH1-208ENST00000430669 FAM53AQ6NSI3 398 aaPredicted RBP9.49□□□□□ -0.89
PTCH1-208ENST00000430669 TREML4Q6UXN2 200 aa9.49□□□□□ -0.89
PTCH1-208ENST00000430669 RAX2Q96IS3 184 aa9.49□□□□□ -0.89
PTCH1-208ENST00000430669 PEMTQ9UBM1 199 aa9.49□□□□□ -0.89
PTCH1-208ENST00000430669 PRSS8Q16651 343 aa9.49□□□□□ -0.89
PTCH1-208ENST00000430669 DGAT2L7PQ6IED9 249 aa9.49□□□□□ -0.89
PTCH1-208ENST00000430669 RASL11AQ6T310 242 aa9.49□□□□□ -0.89
PTCH1-208ENST00000430669 ZNF600Q6ZNG1 722 aa9.49□□□□□ -0.89
PTCH1-208ENST00000430669 A0A1B0GUT8 65 aa9.49□□□□□ -0.89
PTCH1-208ENST00000430669 IZUMO1RA6ND01 250 aa9.49□□□□□ -0.89
PTCH1-208ENST00000430669 C1QTNF9BB2RNN3 333 aa9.49□□□□□ -0.89
PTCH1-208ENST00000430669 FOLR2P14207 255 aa9.49□□□□□ -0.89
PTCH1-208ENST00000430669 SPSB3Q6PJ21 355 aa9.49□□□□□ -0.89
PTCH1-208ENST00000430669 MGST2Q99735 147 aa9.49□□□□□ -0.89
PTCH1-208ENST00000430669 CSN3P07498 182 aa9.49□□□□□ -0.89
PTCH1-208ENST00000430669 ERVK11-1P61568 191 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms