RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 ZNF562Q6V9R5 426 aa21.03■□□□□ 0.96
LDB1-202ENST00000425280 FAM103A1Q9BTL3 118 aaKnown RBP21.03■□□□□ 0.96
LDB1-202ENST00000425280 KMT2BQ9UMN6 2715 aaPredicted RBP21.02■□□□□ 0.96
LDB1-202ENST00000425280 ARL14EPLP0DKL9 152 aa21.02■□□□□ 0.96
LDB1-202ENST00000425280 CTRB1P17538 263 aa21.02■□□□□ 0.96
LDB1-202ENST00000425280 CX3CL1P78423 397 aa21.02■□□□□ 0.96
LDB1-202ENST00000425280 CTRB2Q6GPI1 263 aa21.02■□□□□ 0.96
LDB1-202ENST00000425280 WNT10AQ9GZT5 417 aa21.02■□□□□ 0.96
LDB1-202ENST00000425280 CD81P60033 236 aa21.01■□□□□ 0.95
LDB1-202ENST00000425280 MEF2BQ02080 365 aaPredicted RBP21.01■□□□□ 0.95
LDB1-202ENST00000425280 TAGLN2P37802 199 aaKnown RBP21.01■□□□□ 0.95
LDB1-202ENST00000425280 TMEM88Q6PEY1 159 aa21.01■□□□□ 0.95
LDB1-202ENST00000425280 Q8N9W7 124 aa21.01■□□□□ 0.95
LDB1-202ENST00000425280 IGHV3-21A0A0B4J1V1 117 aa21■□□□□ 0.95
LDB1-202ENST00000425280 TRAV40A0A0B4J280 105 aa21■□□□□ 0.95
LDB1-202ENST00000425280 TCRBV4S1A1TA0A5B7 111 aa21■□□□□ 0.95
LDB1-202ENST00000425280 CXorf1O96002 111 aa21■□□□□ 0.95
LDB1-202ENST00000425280 MT-CO2P00403 227 aa21■□□□□ 0.95
LDB1-202ENST00000425280 AWAT1Q58HT5 328 aa21■□□□□ 0.95
LDB1-202ENST00000425280 FAM90A2PQ658T7 463 aa21■□□□□ 0.95
LDB1-202ENST00000425280 PUS1Q9Y606 427 aaKnown RBP eCLIP21■□□□□ 0.95
LDB1-202ENST00000425280 PAGE4O60829 102 aa21■□□□□ 0.95
LDB1-202ENST00000425280 NDPQ00604 133 aa21■□□□□ 0.95
LDB1-202ENST00000425280 ZNF90Q03938 601 aa21■□□□□ 0.95
LDB1-202ENST00000425280 FAM78BQ5VT40 261 aa21■□□□□ 0.95
LDB1-202ENST00000425280 SPNS3Q6ZMD2 512 aa21■□□□□ 0.95
LDB1-202ENST00000425280 CBLN2Q8IUK8 224 aa21■□□□□ 0.95
LDB1-202ENST00000425280 TMEM116Q8NCL8 245 aa21■□□□□ 0.95
LDB1-202ENST00000425280 ARPC1AQ92747 370 aa21■□□□□ 0.95
LDB1-202ENST00000425280 C1RLQ9NZP8 487 aa21■□□□□ 0.95
LDB1-202ENST00000425280 B4DSR2 109 aa20.99■□□□□ 0.95
LDB1-202ENST00000425280 M0R036 132 aa20.99■□□□□ 0.95
LDB1-202ENST00000425280 AKIRIN2Q53H80 203 aa20.99■□□□□ 0.95
LDB1-202ENST00000425280 C20orf24Q9BUV8 137 aa20.99■□□□□ 0.95
LDB1-202ENST00000425280 FUT9Q9Y231 359 aa20.99■□□□□ 0.95
LDB1-202ENST00000425280 MIR17HGQ75NE6 70 aa20.98■□□□□ 0.95
LDB1-202ENST00000425280 A0A096LNT2 108 aa20.98■□□□□ 0.95
LDB1-202ENST00000425280 H3BQ15 152 aa20.98■□□□□ 0.95
LDB1-202ENST00000425280 ASPHD1Q5U4P2 390 aa20.98■□□□□ 0.95
LDB1-202ENST00000425280 BRD3OSQ6XYD6 125 aa20.98■□□□□ 0.95
LDB1-202ENST00000425280 C22orf15Q8WYQ4 148 aa20.98■□□□□ 0.95
LDB1-202ENST00000425280 C19orf24Q9BVV8 132 aa20.98■□□□□ 0.95
LDB1-202ENST00000425280 C7orf69Q9H7B7 122 aa20.98■□□□□ 0.95
LDB1-202ENST00000425280 SVEP1Q4LDE5 3571 aa20.97■□□□□ 0.95
LDB1-202ENST00000425280 PSMB11A5LHX3 300 aa20.97■□□□□ 0.95
LDB1-202ENST00000425280 I3L2K1 104 aa20.97■□□□□ 0.95
LDB1-202ENST00000425280 OR5G3P0C626 314 aa20.97■□□□□ 0.95
LDB1-202ENST00000425280 IGHV4-38-2P0DP08 117 aa20.97■□□□□ 0.95
LDB1-202ENST00000425280 TMEM37Q8WXS4 190 aa20.97■□□□□ 0.95
LDB1-202ENST00000425280 HIF1ANQ9NWT6 349 aa20.97■□□□□ 0.95
LDB1-202ENST00000425280 CHD6Q8TD26 2715 aa20.96■□□□□ 0.95
LDB1-202ENST00000425280 USP9YO00507 2555 aaPredicted RBP20.96■□□□□ 0.95
LDB1-202ENST00000425280 C7orf77A4D0Y5 90 aa20.96■□□□□ 0.95
LDB1-202ENST00000425280 GCHFRP30047 84 aa20.96■□□□□ 0.95
LDB1-202ENST00000425280 SELENOTP62341 195 aa20.96■□□□□ 0.95
LDB1-202ENST00000425280 TNFRSF19Q9NS68 423 aa20.96■□□□□ 0.95
LDB1-202ENST00000425280 IGHV7-81A0A0B4J1V7 117 aa20.95■□□□□ 0.94
LDB1-202ENST00000425280 PLA2G2AP14555 144 aa20.95■□□□□ 0.94
LDB1-202ENST00000425280 AKR1C3P42330 323 aa20.95■□□□□ 0.94
LDB1-202ENST00000425280 OR4F5Q8NH21 305 aa20.95■□□□□ 0.94
LDB1-202ENST00000425280 NANPQ8TBE9 248 aa20.95■□□□□ 0.94
LDB1-202ENST00000425280 OR4F4Q96R69 305 aa20.95■□□□□ 0.94
LDB1-202ENST00000425280 TRGV9Q99603 122 aa20.95■□□□□ 0.94
LDB1-202ENST00000425280 RPS10P5Q9NQ39 176 aa20.95■□□□□ 0.94
LDB1-202ENST00000425280 CELSR2Q9HCU4 2923 aa20.95■□□□□ 0.94
LDB1-202ENST00000425280 HLA-DRB1P01911 266 aa20.95■□□□□ 0.94
LDB1-202ENST00000425280 UBE2G2P60604 165 aa20.95■□□□□ 0.94
LDB1-202ENST00000425280 OR1L6Q8NGR2 347 aa20.95■□□□□ 0.94
LDB1-202ENST00000425280 NIPSNAP3BQ9BS92 247 aa20.95■□□□□ 0.94
LDB1-202ENST00000425280 ANKRD17O75179 2603 aaKnown RBP20.95■□□□□ 0.94
LDB1-202ENST00000425280 NPIPB5A8MRT5 1133 aa20.94■□□□□ 0.94
LDB1-202ENST00000425280 NDUFS6O75380 124 aaKnown RBP20.94■□□□□ 0.94
LDB1-202ENST00000425280 RASL11BQ9BPW5 248 aa20.94■□□□□ 0.94
LDB1-202ENST00000425280 BEX4Q9NWD9 120 aaPredicted RBP20.94■□□□□ 0.94
LDB1-202ENST00000425280 TRAV20A0A0B4J274 112 aa20.93■□□□□ 0.94
LDB1-202ENST00000425280 A0A0U1RQK1 487 aa20.93■□□□□ 0.94
LDB1-202ENST00000425280 C11orf94C9JXX5 98 aa20.93■□□□□ 0.94
LDB1-202ENST00000425280 EGR2P11161 476 aaPredicted RBP20.93■□□□□ 0.94
LDB1-202ENST00000425280 DNAJC4Q9NNZ3 241 aa20.93■□□□□ 0.94
LDB1-202ENST00000425280 TMEM250H0YL14 139 aa20.93■□□□□ 0.94
LDB1-202ENST00000425280 K7EIM0 57 aa20.93■□□□□ 0.94
LDB1-202ENST00000425280 TSPAN4O14817 238 aa20.93■□□□□ 0.94
LDB1-202ENST00000425280 TSPAN9O75954 239 aa20.93■□□□□ 0.94
LDB1-202ENST00000425280 KLF17Q5JT82 389 aaPredicted RBP20.93■□□□□ 0.94
LDB1-202ENST00000425280 TTC9CQ8N5M4 171 aa20.93■□□□□ 0.94
LDB1-202ENST00000425280 TECRQ9NZ01 308 aaKnown RBP20.93■□□□□ 0.94
LDB1-202ENST00000425280 RHEBQ15382 184 aa20.92■□□□□ 0.94
LDB1-202ENST00000425280 OR4X1Q8NH49 305 aa20.92■□□□□ 0.94
LDB1-202ENST00000425280 TVP23CQ96ET8 276 aa20.92■□□□□ 0.94
LDB1-202ENST00000425280 HSPB9Q9BQS6 159 aa20.92■□□□□ 0.94
LDB1-202ENST00000425280 MEGF9Q9H1U4 602 aa20.92■□□□□ 0.94
LDB1-202ENST00000425280 GSX1Q9H4S2 264 aaPredicted RBP20.92■□□□□ 0.94
LDB1-202ENST00000425280 DOK5Q9P104 306 aa20.92■□□□□ 0.94
LDB1-202ENST00000425280 DEFB113Q30KQ7 82 aa20.92■□□□□ 0.94
LDB1-202ENST00000425280 PATE2Q6UY27 113 aa20.92■□□□□ 0.94
LDB1-202ENST00000425280 MRPL32Q9BYC8 188 aaKnown RBP20.92■□□□□ 0.94
LDB1-202ENST00000425280 CSMD2Q7Z408 3487 aa20.91■□□□□ 0.94
LDB1-202ENST00000425280 COX7A2P2O60397 106 aa20.91■□□□□ 0.94
LDB1-202ENST00000425280 GATA3P23771 443 aa20.91■□□□□ 0.94
LDB1-202ENST00000425280 ATP5G3P48201 142 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms