RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 PNKDQ8N490 385 aa9.5□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 BEND2Q8NDZ0 799 aa9.5□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 OR4A5Q8NH83 315 aa9.5□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 MISP3Q96FF7 219 aa9.5□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 ISLRO14498 428 aa9.5□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 ZNF253O75346 499 aa9.5□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 ETFRF1Q6IPR1 90 aa9.5□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 TMEM167AQ8TBQ9 72 aa9.5□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 DYSFO75923 2080 aa9.5□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 PTPRBP23467 1997 aa9.49□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 NUPR1O60356 82 aa9.49□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 SNRPCP09234 159 aaKnown RBP9.49□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 BRS3P32247 399 aa9.49□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 PPOXP50336 477 aa9.49□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 KIAA1644Q3SXP7 199 aa9.49□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 SSX8Q7RTT4 187 aa9.49□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 RPH3ALQ9UNE2 315 aa9.49□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 IGHV3-72A0A0B4J1Y9 119 aa9.49□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 REG1AP05451 166 aa9.49□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 AMTP48728 403 aa9.49□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 KRTDAPP60985 99 aa9.49□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 CX3CL1P78423 397 aa9.49□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 SPTA1P02549 2419 aa9.49□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 PLAUP00749 431 aa9.49□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 HLA-DQA1P01909 254 aa9.49□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 PYYP10082 97 aa9.49□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 CD33P20138 364 aa9.49□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 TAS2R60P59551 318 aa9.49□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 ZGRF1Q86YA3 2104 aa9.49□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 ST6GALNAC3Q8NDV1 305 aa9.49□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 ABHD17AQ96GS6 310 aa9.49□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 CBLN4Q9NTU7 201 aa9.49□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 CFAP47Q6ZTR5 3102 aa9.49□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 TMEM183BQ1AE95 376 aa9.48□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 HCP5Q6MZN7 132 aa9.48□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 STXBP6Q8NFX7 210 aa9.48□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 OR1B1Q8NGR6 318 aa9.48□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 VN1R17PQ8TDU5 208 aa9.48□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 BLNKQ8WV28 456 aa9.48□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 VAMP8Q9BV40 100 aa9.48□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 TCRBV4S1A1TA0A5B7 111 aa9.48□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 PMCHP20382 165 aa9.48□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 TNXAQ16473 311 aa9.48□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 CHRDL1Q9BU40 450 aa9.48□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 CDC42EP3Q9UKI2 254 aa9.48□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 M0R143 59 aa9.48□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 AMY1AP04745 511 aa9.48□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 RNF224P0DH78 156 aa9.48□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 LGALS7P47929 136 aa9.48□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 WT1-ASQ06250 92 aa9.48□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 C1orf194Q5T5A4 169 aa9.48□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 LYPD2Q6UXB3 125 aa9.48□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 LINC00305Q7Z4B0 112 aa9.48□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 ZNF503Q96F45 646 aa9.48□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 SLC25A5P05141 298 aaKnown RBP9.47□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 APELAP0DMC3 54 aa9.47□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 RBPJQ06330 500 aa9.47□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 PLGLAQ15195 96 aa9.47□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 RNASE6Q93091 150 aaKnown RBP9.47□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 PERPQ96FX8 193 aa9.47□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 TMEM68Q96MH6 324 aa9.47□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 C2orf88Q9BSF0 95 aa9.47□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 SSBP3Q9BWW4 388 aaPredicted RBP9.47□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 TNFRSF19Q9NS68 423 aa9.47□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 PAM16Q9Y3D7 125 aa9.47□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 PIEZO2Q9H5I5 2752 aa9.47□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 APCSP02743 223 aa9.47□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 DIAPH2-AS1Q14236 149 aa9.47□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 FAM71F2Q6NXP2 309 aa9.47□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 PEX7O00628 323 aa9.47□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 CA1P00915 261 aaPredicted RBP9.47□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 SRIP30626 198 aa9.47□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 MFAP2P55001 183 aa9.47□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 Q0VG73 95 aa9.47□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 LINC00479Q96M42 142 aa9.47□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 SLC25A2Q9BXI2 301 aa9.47□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 POLR3KQ9Y2Y1 108 aaPredicted RBP9.47□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 ASPMQ8IZT6 3477 aa9.47□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 TRAV34A0A0B4J273 112 aa9.46□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 E7EUB6 86 aa9.46□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 RPL27AP46776 148 aaKnown RBP9.46□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 GNB4Q9HAV0 340 aa9.46□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 INSIG2Q9Y5U4 225 aa9.46□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 MGAQ8IWI9 3026 aa9.46□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 MOSP00540 346 aa9.46□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 NTF3P20783 257 aa9.46□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 PRRX1P54821 245 aa9.46□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 BORCS7Q96B45 105 aa9.46□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 FNDC4Q9H6D8 234 aaPredicted RBP9.46□□□□□ -0.89
CSPG4P3Y-201ENST00000418188 FRMD6-AS1P0C7T7 363 aa9.46□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 HIST1H1EP10412 219 aaKnown RBP9.46□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 MORN5Q5VZ52 161 aa9.46□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 Q6ZWC4 215 aa9.46□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 TANC2Q9HCD6 1990 aa9.46□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 APC2O95996 2303 aa9.45□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 IGHV1-69-2A0A0G2JMI3 117 aa9.45□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 LINC00311Q8N616 119 aa9.45□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 ARFGEF3Q5TH69 2177 aa9.45□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 IGHV3-21A0A0B4J1V1 117 aa9.45□□□□□ -0.9
CSPG4P3Y-201ENST00000418188 IZUMO1RA6ND01 250 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms