RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 ARL3P36405 182 aa7.97□□□□□ -1.13
DDB1-202ENST00000414411 VDAC2P45880 294 aaPredicted RBP7.97□□□□□ -1.13
DDB1-202ENST00000414411 LGALS4P56470 323 aa7.97□□□□□ -1.13
DDB1-202ENST00000414411 PNRC1Q12796 327 aaPredicted RBP7.97□□□□□ -1.13
DDB1-202ENST00000414411 RBMS3Q6XE24 437 aaKnown RBP7.97□□□□□ -1.13
DDB1-202ENST00000414411 ZNF709Q8N972 641 aa7.97□□□□□ -1.13
DDB1-202ENST00000414411 OR10G9Q8NGN4 311 aa7.97□□□□□ -1.13
DDB1-202ENST00000414411 OR10G7Q8NGN6 311 aa7.97□□□□□ -1.13
DDB1-202ENST00000414411 WDR83OSQ9Y284 106 aa7.97□□□□□ -1.13
DDB1-202ENST00000414411 AMMECR1Q9Y4X0 333 aaPredicted RBP7.97□□□□□ -1.13
DDB1-202ENST00000414411 SOX21Q9Y651 276 aaPredicted RBP7.97□□□□□ -1.13
DDB1-202ENST00000414411 TRAV3A0A0B4J244 114 aa7.97□□□□□ -1.13
DDB1-202ENST00000414411 C5orf52A6NGY3 159 aa7.97□□□□□ -1.13
DDB1-202ENST00000414411 C17orf112F2Z3M2 114 aa7.97□□□□□ -1.13
DDB1-202ENST00000414411 SNRPEP62304 92 aaKnown RBP7.97□□□□□ -1.13
DDB1-202ENST00000414411 RPP30P78346 268 aaKnown RBP7.97□□□□□ -1.13
DDB1-202ENST00000414411 MEF2BQ02080 365 aaPredicted RBP7.97□□□□□ -1.13
DDB1-202ENST00000414411 TPTE2P1Q5T6R2 138 aa7.97□□□□□ -1.13
DDB1-202ENST00000414411 FAM71F2Q6NXP2 309 aa7.97□□□□□ -1.13
DDB1-202ENST00000414411 C1QL4Q86Z23 238 aa7.97□□□□□ -1.13
DDB1-202ENST00000414411 ACTR3CQ9C0K3 210 aaPredicted RBP7.97□□□□□ -1.13
DDB1-202ENST00000414411 C15orf61A6NNL5 157 aa7.96□□□□□ -1.13
DDB1-202ENST00000414411 OOSP1A8MZH6 123 aa7.96□□□□□ -1.13
DDB1-202ENST00000414411 PRSS46E5RG02 174 aa7.96□□□□□ -1.13
DDB1-202ENST00000414411 HMGB3O15347 200 aaKnown RBP7.96□□□□□ -1.13
DDB1-202ENST00000414411 IFNA10P01566 189 aa7.96□□□□□ -1.13
DDB1-202ENST00000414411 CT45A6P0DMU7 189 aa7.96□□□□□ -1.13
DDB1-202ENST00000414411 CT45A5P0DMU8 189 aa7.96□□□□□ -1.13
DDB1-202ENST00000414411 CT45A7P0DMV0 189 aa7.96□□□□□ -1.13
DDB1-202ENST00000414411 IL3RAP26951 378 aa7.96□□□□□ -1.13
DDB1-202ENST00000414411 CD1BP29016 333 aa7.96□□□□□ -1.13
DDB1-202ENST00000414411 CEACAM3P40198 252 aa7.96□□□□□ -1.13
DDB1-202ENST00000414411 THBS3P49746 956 aa7.96□□□□□ -1.13
DDB1-202ENST00000414411 CD81P60033 236 aa7.96□□□□□ -1.13
DDB1-202ENST00000414411 COTL1Q14019 142 aa7.96□□□□□ -1.13
DDB1-202ENST00000414411 ELOBQ15370 118 aa7.96□□□□□ -1.13
DDB1-202ENST00000414411 SSX2Q16385 188 aa7.96□□□□□ -1.13
DDB1-202ENST00000414411 SAMD5Q5TGI4 173 aa7.96□□□□□ -1.13
DDB1-202ENST00000414411 IL17RELQ6ZVW7 336 aa7.96□□□□□ -1.13
DDB1-202ENST00000414411 Q71RC1 249 aaPredicted RBP7.96□□□□□ -1.13
DDB1-202ENST00000414411 BCL6BQ8N143 479 aaPredicted RBP7.96□□□□□ -1.13
DDB1-202ENST00000414411 Q8WTZ3 238 aa7.96□□□□□ -1.13
DDB1-202ENST00000414411 ADTRPQ96IZ2 230 aa7.96□□□□□ -1.13
DDB1-202ENST00000414411 MEGF9Q9H1U4 602 aa7.96□□□□□ -1.13
DDB1-202ENST00000414411 HEYLQ9NQ87 328 aaPredicted RBP7.96□□□□□ -1.13
DDB1-202ENST00000414411 TCF19Q9Y242 345 aa7.96□□□□□ -1.13
DDB1-202ENST00000414411 HILPDAQ9Y5L2 63 aa7.96□□□□□ -1.13
DDB1-202ENST00000414411 CUBNO60494 3623 aa7.96□□□□□ -1.14
DDB1-202ENST00000414411 TRAV34A0A0B4J273 112 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 A0A1W2PPI3 338 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 ZNF98A6NK75 572 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 MPDU1O75352 247 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 BMI1P35226 326 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 REG1BP48304 166 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 ZNF343Q6P1L6 599 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 ZNF383Q8NA42 475 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 RAB24Q969Q5 203 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 RPEQ96AT9 228 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 GGACTQ9BVM4 153 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 TMPRSS5Q9H3S3 457 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 SDF2L1Q9HCN8 221 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 MANBALQ9NQG1 85 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 SETD2Q9BYW2 2564 aaPredicted RBP7.95□□□□□ -1.14
DDB1-202ENST00000414411 IGHV1-3A0A0C4DH29 117 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 TMEM250H0YL14 139 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 RRHO14718 337 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 SOX15O60248 233 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 NDUFS6O75380 124 aaKnown RBP7.95□□□□□ -1.14
DDB1-202ENST00000414411 HNF1AP20823 631 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 PSMB3P49720 205 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 POU2AF1Q16633 256 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 ACOT6Q3I5F7 207 aaPredicted RBP7.95□□□□□ -1.14
DDB1-202ENST00000414411 OR4A47Q6IF82 309 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 TGIF2LXQ8IUE1 241 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 TMEM170AQ8WVE7 144 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 C22orf15Q8WYQ4 148 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 CFHR4Q92496 578 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 NABP2Q9BQ15 211 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 TMEM14BQ9NUH8 114 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 TMEM242Q9NWH2 141 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 METTL1Q9UBP6 276 aaKnown RBP7.95□□□□□ -1.14
DDB1-202ENST00000414411 CDC42EP3Q9UKI2 254 aa7.95□□□□□ -1.14
DDB1-202ENST00000414411 FOXA2Q9Y261 457 aaPredicted RBP7.95□□□□□ -1.14
DDB1-202ENST00000414411 SEC14L6B5MCN3 397 aa7.94□□□□□ -1.14
DDB1-202ENST00000414411 INAFM1C9JVW0 142 aa7.94□□□□□ -1.14
DDB1-202ENST00000414411 CYB5BO43169 146 aa7.94□□□□□ -1.14
DDB1-202ENST00000414411 CXCL1P09341 107 aa7.94□□□□□ -1.14
DDB1-202ENST00000414411 DEFA4P12838 97 aa7.94□□□□□ -1.14
DDB1-202ENST00000414411 CDC34P49427 236 aaPredicted RBP7.94□□□□□ -1.14
DDB1-202ENST00000414411 SRSF2Q01130 221 aaKnown RBP7.94□□□□□ -1.14
DDB1-202ENST00000414411 DEFB112Q30KQ8 113 aa7.94□□□□□ -1.14
DDB1-202ENST00000414411 CCDC144NLQ6NUI1 221 aa7.94□□□□□ -1.14
DDB1-202ENST00000414411 TREML4Q6UXN2 200 aa7.94□□□□□ -1.14
DDB1-202ENST00000414411 CYP2G1PQ6ZSU1 146 aa7.94□□□□□ -1.14
DDB1-202ENST00000414411 OR5AN1Q8NGI8 311 aa7.94□□□□□ -1.14
DDB1-202ENST00000414411 PIFOQ8TCI5 191 aa7.94□□□□□ -1.14
DDB1-202ENST00000414411 C12orf57Q99622 126 aa7.94□□□□□ -1.14
DDB1-202ENST00000414411 MRPL20Q9BYC9 149 aaKnown RBP7.94□□□□□ -1.14
DDB1-202ENST00000414411 URGCP-MRPS24S4R325 110 aa7.94□□□□□ -1.14
DDB1-202ENST00000414411 SMCO3A2RU48 225 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms