RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 MMDQ15546 238 aa4.4□□□□□ -1.71
EPHA4-202ENST00000409854 LEMD1Q68G75 181 aa4.4□□□□□ -1.71
EPHA4-202ENST00000409854 CYB5R2Q6BCY4 276 aa4.4□□□□□ -1.71
EPHA4-202ENST00000409854 ETFRF1Q6IPR1 90 aa4.4□□□□□ -1.71
EPHA4-202ENST00000409854 RBMS3Q6XE24 437 aaKnown RBP4.4□□□□□ -1.71
EPHA4-202ENST00000409854 TMEM182Q6ZP80 229 aaPredicted RBP4.4□□□□□ -1.71
EPHA4-202ENST00000409854 SCGB1C1Q8TD33 95 aa4.4□□□□□ -1.71
EPHA4-202ENST00000409854 ZNF479Q96JC4 524 aa4.4□□□□□ -1.71
EPHA4-202ENST00000409854 MEGF9Q9H1U4 602 aa4.4□□□□□ -1.71
EPHA4-202ENST00000409854 RNF24Q9Y225 148 aa4.4□□□□□ -1.71
EPHA4-202ENST00000409854 CELSR2Q9HCU4 2923 aa4.39□□□□□ -1.71
EPHA4-202ENST00000409854 USP9YO00507 2555 aaPredicted RBP4.39□□□□□ -1.71
EPHA4-202ENST00000409854 LRRK2Q5S007 2527 aa4.39□□□□□ -1.71
EPHA4-202ENST00000409854 TRAV40A0A0B4J280 105 aa4.39□□□□□ -1.71
EPHA4-202ENST00000409854 MPDU1O75352 247 aa4.39□□□□□ -1.71
EPHA4-202ENST00000409854 RPLP1P05386 114 aaKnown RBP4.39□□□□□ -1.71
EPHA4-202ENST00000409854 ERHP84090 104 aaKnown RBP4.39□□□□□ -1.71
EPHA4-202ENST00000409854 TNXAQ16473 311 aa4.39□□□□□ -1.71
EPHA4-202ENST00000409854 C5orf64Q2M2E5 130 aa4.39□□□□□ -1.71
EPHA4-202ENST00000409854 Q6ZRG5 221 aa4.39□□□□□ -1.71
EPHA4-202ENST00000409854 MRPL41Q8IXM3 137 aaKnown RBP4.39□□□□□ -1.71
EPHA4-202ENST00000409854 RSG1Q9BU20 258 aa4.39□□□□□ -1.71
EPHA4-202ENST00000409854 HINT2Q9BX68 163 aa4.39□□□□□ -1.71
EPHA4-202ENST00000409854 NPCDR1Q9BY65 106 aa4.39□□□□□ -1.71
EPHA4-202ENST00000409854 ASH1LQ9NR48 2969 aaKnown RBP4.39□□□□□ -1.71
EPHA4-202ENST00000409854 HIF1ANQ9NWT6 349 aa4.39□□□□□ -1.71
EPHA4-202ENST00000409854 LSM4Q9Y4Z0 139 aaKnown RBP4.39□□□□□ -1.71
EPHA4-202ENST00000409854 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.39□□□□□ -1.71
EPHA4-202ENST00000409854 IGHV4-31P0DP07 118 aa4.39□□□□□ -1.71
EPHA4-202ENST00000409854 BRS3P32247 399 aa4.39□□□□□ -1.71
EPHA4-202ENST00000409854 FABP9Q0Z7S8 132 aa4.39□□□□□ -1.71
EPHA4-202ENST00000409854 ARSJQ5FYB0 599 aaPredicted RBP4.39□□□□□ -1.71
EPHA4-202ENST00000409854 KLF17Q5JT82 389 aaPredicted RBP4.39□□□□□ -1.71
EPHA4-202ENST00000409854 RUSC1-AS1Q66K80 236 aa4.39□□□□□ -1.71
EPHA4-202ENST00000409854 HIST2H2BCQ6DN03 193 aa4.39□□□□□ -1.71
EPHA4-202ENST00000409854 TREML4Q6UXN2 200 aa4.39□□□□□ -1.71
EPHA4-202ENST00000409854 IL34Q6ZMJ4 242 aa4.39□□□□□ -1.71
EPHA4-202ENST00000409854 RNASEH2CQ8TDP1 164 aaKnown RBP4.39□□□□□ -1.71
EPHA4-202ENST00000409854 SRSF12Q8WXF0 261 aaKnown RBP4.39□□□□□ -1.71
EPHA4-202ENST00000409854 P2RX4Q99571 388 aa4.39□□□□□ -1.71
EPHA4-202ENST00000409854 C7orf69Q9H7B7 122 aa4.39□□□□□ -1.71
EPHA4-202ENST00000409854 KIAA1456Q9P272 454 aa4.39□□□□□ -1.71
EPHA4-202ENST00000409854 WNK2Q9Y3S1 2297 aa4.39□□□□□ -1.71
EPHA4-202ENST00000409854 PLXNB1O43157 2135 aa4.39□□□□□ -1.71
EPHA4-202ENST00000409854 A8MWP6 167 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 FCN1O00602 326 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 SOX15O60248 233 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 AVPP01185 164 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 FSHBP01225 129 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 MT-ND4LP03901 98 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 FAM106CPP0CH98 169 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 IGHV4-38-2P0DP08 117 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 FGF7P21781 194 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 CD24P25063 80 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 CDX1P47902 265 aaPredicted RBP4.38□□□□□ -1.71
EPHA4-202ENST00000409854 DEFA5Q01523 94 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 CD69Q07108 199 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 PEA15Q15121 130 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 FAM120AOSQ5T036 256 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 NPVFQ9HCQ7 196 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 PEF1Q9UBV8 284 aaKnown RBP4.38□□□□□ -1.71
EPHA4-202ENST00000409854 SMPXQ9UHP9 88 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 DOPEY2Q9Y3R5 2298 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 RNF223E7ERA6 249 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 SNCAP37840 140 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 SUB1P53999 127 aaKnown RBP eCLIP4.38□□□□□ -1.71
EPHA4-202ENST00000409854 HES1Q14469 280 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 MTURNQ8N3F0 131 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 Q8N9W7 124 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 BPIFCQ8NFQ6 507 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 PIFOQ8TCI5 191 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 CACNG8Q8WXS5 425 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 CLUHP3Q96NS8 147 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 SMCO4Q9NRQ5 59 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 GAR1Q9NY12 217 aaKnown RBP4.38□□□□□ -1.71
EPHA4-202ENST00000409854 MED13LQ71F56 2210 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 CSMD2Q7Z408 3487 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 A0A0U1RQK1 487 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 A0A1B0GV72 72 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 ZNF320A2RRD8 509 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 ACTL6BO94805 426 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 HLA-DRB1P01911 266 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 OR13C7P0DN81 318 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 AREGP15514 252 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 HOXA5P20719 270 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 CAMLGP49069 296 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 MFAP2P55001 183 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 TMEM249Q2WGJ8 235 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 TMEM41BQ5BJD5 291 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 AKR1C8PQ5T2L2 129 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 ACSM6Q6P461 480 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 ZNF562Q6V9R5 426 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 COMMD1Q8N668 190 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 OR1P1Q8NH06 330 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 RXFP4Q8TDU9 374 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 Q96MF0 132 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 MGST2Q99735 147 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 C1RLQ9NZP8 487 aa4.38□□□□□ -1.71
EPHA4-202ENST00000409854 F11RQ9Y624 299 aaKnown RBP4.38□□□□□ -1.71
EPHA4-202ENST00000409854 NAV3Q8IVL0 2385 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms