RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 PPP1R32Q7Z5V6 425 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 TMEM171Q8WVE6 324 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 YPEL2Q96QA6 119 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 SFTPCP11686 197 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 ERVK11-1P61568 191 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 TREML4Q6UXN2 200 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 IGKV1-27A0A075B6S5 117 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 IGHV1-69-2A0A0G2JMI3 117 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 TCRBV4S1A1TA0A5B7 111 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 NMSQ5H8A3 153 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 PAPPA-AS1Q5QFB9 102 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 ATP1A1-AS1Q5TC04 95 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 LCN12Q6JVE5 192 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 RPP25LQ8N5L8 163 aaKnown RBP7.2□□□□□ -1.26
CTNND1-205ENST00000399050 FAM216BQ8N7L0 139 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 MRPS16Q9Y3D3 137 aaKnown RBP7.2□□□□□ -1.26
CTNND1-205ENST00000399050 IGHV3OR16-12A0A075B7B8 117 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 TRAV5A0A0B4J249 113 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 SPAARA0A1B0GVQ0 90 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 C3orf79P0CE67 100 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 EVI2AP22794 236 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 OR5AN1Q8NGI8 311 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 POLR3KQ9Y2Y1 108 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-205ENST00000399050 LOC105371242A0A075B767 164 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 IGHV3-49A0A0A0MS15 119 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 CCL21O00585 134 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 PSG1P11464 419 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 TMEM95Q3KNT9 176 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 TPTE2P1Q5T6R2 138 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 DOCK3Q8IZD9 2030 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 BMPERQ8N8U9 685 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 GGTLC1Q9BX51 225 aa7.2□□□□□ -1.26
CTNND1-205ENST00000399050 A0A087X0K7 114 aa7.19□□□□□ -1.26
CTNND1-205ENST00000399050 A0A0G2JLM5 398 aa7.19□□□□□ -1.26
CTNND1-205ENST00000399050 FAM90A9PA6NNJ1 464 aa7.19□□□□□ -1.26
CTNND1-205ENST00000399050 C9JCJ5 164 aa7.19□□□□□ -1.26
CTNND1-205ENST00000399050 MGST2Q99735 147 aa7.19□□□□□ -1.26
CTNND1-205ENST00000399050 ZSWIM8A7E2V4 1837 aa7.19□□□□□ -1.26
CTNND1-205ENST00000399050 ESDP10768 282 aa7.19□□□□□ -1.26
CTNND1-205ENST00000399050 IGHV1-2P23083 117 aa7.19□□□□□ -1.26
CTNND1-205ENST00000399050 DMRTC2Q8IXT2 367 aaPredicted RBP7.19□□□□□ -1.26
CTNND1-205ENST00000399050 PRR7Q8TB68 274 aa7.19□□□□□ -1.26
CTNND1-205ENST00000399050 TNS1Q9HBL0 1735 aaKnown RBP7.19□□□□□ -1.26
CTNND1-205ENST00000399050 IGKV3-20P01619 116 aa7.19□□□□□ -1.26
CTNND1-205ENST00000399050 GAGE13Q4V321 117 aa7.19□□□□□ -1.26
CTNND1-205ENST00000399050 FGFBP3Q8TAT2 258 aa7.19□□□□□ -1.26
CTNND1-205ENST00000399050 ZNF479Q96JC4 524 aa7.19□□□□□ -1.26
CTNND1-205ENST00000399050 MOB4Q9Y3A3 225 aa7.19□□□□□ -1.26
CTNND1-205ENST00000399050 HEATR5BQ9P2D3 2071 aa7.19□□□□□ -1.26
CTNND1-205ENST00000399050 FAM90A2PQ658T7 463 aa7.19□□□□□ -1.26
CTNND1-205ENST00000399050 DNASE2BQ8WZ79 361 aa7.19□□□□□ -1.26
CTNND1-205ENST00000399050 DDB2Q92466 427 aa7.19□□□□□ -1.26
CTNND1-205ENST00000399050 KIF26BQ2KJY2 2108 aa7.19□□□□□ -1.26
CTNND1-205ENST00000399050 SBF1O95248 1867 aa7.19□□□□□ -1.26
CTNND1-205ENST00000399050 CD33P20138 364 aa7.19□□□□□ -1.26
CTNND1-205ENST00000399050 DUTP33316 252 aaKnown RBP7.19□□□□□ -1.26
CTNND1-205ENST00000399050 SUMO2P61956 95 aaKnown RBP7.19□□□□□ -1.26
CTNND1-205ENST00000399050 FAM90A1Q86YD7 464 aa7.19□□□□□ -1.26
CTNND1-205ENST00000399050 SELENOKQ9Y6D0 94 aa7.19□□□□□ -1.26
CTNND1-205ENST00000399050 IGHV2OR16-5A0A0B4J2B6 119 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 CRYGSP22914 178 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 RNASE4P34096 147 aaKnown RBP7.18□□□□□ -1.26
CTNND1-205ENST00000399050 RRN3P1Q2M238 152 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 MPV17L2Q567V2 206 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 RASL11AQ6T310 242 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 LHFPL4Q7Z7J7 247 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 OR13C6PQ8NH95 151 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 IFI27L1Q96BM0 104 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 TRAV8-4A0A0B4J246 113 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 EPOPA6NHQ4 379 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 FAM106AQ4KMX7 169 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 DMRTA2Q96SC8 542 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 VKORC1Q9BQB6 163 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 CHTOPQ9Y3Y2 248 aaKnown RBP7.18□□□□□ -1.26
CTNND1-205ENST00000399050 IGKV3OR2-268A0A0C4DH90 116 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 IGKV1D-33P01593 117 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 IGKV1-33P01594 117 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 GLRXP35754 106 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 FAM71F2Q6NXP2 309 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 C5orf24Q7Z6I8 188 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 PSG8Q9UQ74 426 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 PRCDQ00LT1 54 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 SRSF1Q07955 248 aaKnown RBP eCLIP7.18□□□□□ -1.261e-7■□□□□ 10.7
CTNND1-205ENST00000399050 C10orf91Q5T1B1 145 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 SPSB3Q6PJ21 355 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 FBXL7Q9UJT9 491 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 CEACAM4O75871 244 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 IGKV1-5P01602 117 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 CD69Q07108 199 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 OR9G4Q8NGQ1 327 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 GP6Q9HCN6 339 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 PTPRDP23468 1912 aa7.18□□□□□ -1.26
CTNND1-205ENST00000399050 IGLV3-32A0A0A0MS00 114 aa7.17□□□□□ -1.26
CTNND1-205ENST00000399050 CDKN1AP38936 164 aa7.17□□□□□ -1.26
CTNND1-205ENST00000399050 CKS1BP61024 79 aa7.17□□□□□ -1.26
CTNND1-205ENST00000399050 SLC25A2Q9BXI2 301 aa7.17□□□□□ -1.26
CTNND1-205ENST00000399050 C21orf62Q9NYP8 219 aa7.17□□□□□ -1.26
CTNND1-205ENST00000399050 COX11Q9Y6N1 276 aa7.17□□□□□ -1.26
CTNND1-205ENST00000399050 IGHV3OR16-8A0A075B7F1 116 aa7.17□□□□□ -1.26
CTNND1-205ENST00000399050 GUSBP1Q15486 140 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms