RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 IDI2-AS1Q9NZ38 188 aa11.7□□□□□ -0.54
CLIP2-203ENST00000395060 KLF13Q9Y2Y9 288 aaPredicted RBP11.7□□□□□ -0.54
CLIP2-203ENST00000395060 FAM181BA6NEQ2 426 aa11.69□□□□□ -0.54
CLIP2-203ENST00000395060 SRRM4A7MD48 611 aaKnown RBP11.69□□□□□ -0.54
CLIP2-203ENST00000395060 ISLRO14498 428 aa11.69□□□□□ -0.54
CLIP2-203ENST00000395060 MMP23AO75900 390 aa11.69□□□□□ -0.54
CLIP2-203ENST00000395060 PRR20EP86478 221 aa11.69□□□□□ -0.54
CLIP2-203ENST00000395060 PRR20CP86479 221 aa11.69□□□□□ -0.54
CLIP2-203ENST00000395060 PRR20DP86480 221 aa11.69□□□□□ -0.54
CLIP2-203ENST00000395060 PRR20BP86481 221 aa11.69□□□□□ -0.54
CLIP2-203ENST00000395060 PRR20AP86496 221 aa11.69□□□□□ -0.54
CLIP2-203ENST00000395060 CALYQ9NYX4 217 aa11.69□□□□□ -0.54
CLIP2-203ENST00000395060 HIGD1CA8MV81 97 aa11.69□□□□□ -0.54
CLIP2-203ENST00000395060 MT-ND6P03923 174 aa11.69□□□□□ -0.54
CLIP2-203ENST00000395060 REG1AP05451 166 aa11.69□□□□□ -0.54
CLIP2-203ENST00000395060 GABRA6Q16445 453 aa11.69□□□□□ -0.54
CLIP2-203ENST00000395060 C10orf55Q5SWW7 151 aa11.69□□□□□ -0.54
CLIP2-203ENST00000395060 NUP35Q8NFH5 326 aa11.69□□□□□ -0.54
CLIP2-203ENST00000395060 SPRY4Q9C004 299 aa11.69□□□□□ -0.54
CLIP2-203ENST00000395060 COX11Q9Y6N1 276 aa11.69□□□□□ -0.54
CLIP2-203ENST00000395060 SELENOVP59797 346 aa11.69□□□□□ -0.54
CLIP2-203ENST00000395060 SRSF6Q13247 344 aaKnown RBP11.69□□□□□ -0.54
CLIP2-203ENST00000395060 ZPBPQ9BS86 351 aa11.69□□□□□ -0.54
CLIP2-203ENST00000395060 TMEM167BQ9NRX6 74 aa11.69□□□□□ -0.54
CLIP2-203ENST00000395060 LOC105371242A0A075B767 164 aa11.68□□□□□ -0.54
CLIP2-203ENST00000395060 KLRC4-KLRK1H3BQV0 150 aa11.68□□□□□ -0.54
CLIP2-203ENST00000395060 LOXL3P58215 753 aa11.68□□□□□ -0.54
CLIP2-203ENST00000395060 TMEM249Q2WGJ8 235 aa11.68□□□□□ -0.54
CLIP2-203ENST00000395060 FBLN7Q53RD9 439 aa11.68□□□□□ -0.54
CLIP2-203ENST00000395060 OR5B3Q8NH48 314 aa11.68□□□□□ -0.54
CLIP2-203ENST00000395060 OSTCQ9NRP0 149 aa11.68□□□□□ -0.54
CLIP2-203ENST00000395060 AMMECR1Q9Y4X0 333 aaPredicted RBP11.68□□□□□ -0.54
CLIP2-203ENST00000395060 OTOGLQ3ZCN5 2332 aa11.68□□□□□ -0.54
CLIP2-203ENST00000395060 TRBV9A0A0B4J1U6 114 aa11.68□□□□□ -0.54
CLIP2-203ENST00000395060 NKX6-3A6NJ46 265 aa11.68□□□□□ -0.54
CLIP2-203ENST00000395060 UBE2V1Q13404 147 aa11.68□□□□□ -0.54
CLIP2-203ENST00000395060 MSMPQ1L6U9 139 aa11.68□□□□□ -0.54
CLIP2-203ENST00000395060 NUDT10Q8NFP7 164 aa11.68□□□□□ -0.54
CLIP2-203ENST00000395060 NUDT11Q96G61 164 aa11.68□□□□□ -0.54
CLIP2-203ENST00000395060 TNFRSF19Q9NS68 423 aa11.68□□□□□ -0.54
CLIP2-203ENST00000395060 NUDT3O95989 172 aa11.67□□□□□ -0.54
CLIP2-203ENST00000395060 UBE2G1P62253 170 aa11.67□□□□□ -0.54
CLIP2-203ENST00000395060 OR2V2Q96R30 315 aa11.67□□□□□ -0.54
CLIP2-203ENST00000395060 TRAV9-1A0A075B6T8 112 aa11.67□□□□□ -0.54
CLIP2-203ENST00000395060 PRB3Q04118 309 aaPredicted RBP11.67□□□□□ -0.54
CLIP2-203ENST00000395060 C19orf35Q6ZS72 473 aa11.67□□□□□ -0.54
CLIP2-203ENST00000395060 VPS25Q9BRG1 176 aa11.67□□□□□ -0.54
CLIP2-203ENST00000395060 IZUMO1RA6ND01 250 aa11.66□□□□□ -0.54
CLIP2-203ENST00000395060 CRYABP02511 175 aaKnown RBP11.66□□□□□ -0.54
CLIP2-203ENST00000395060 ORM2P19652 201 aa11.66□□□□□ -0.54
CLIP2-203ENST00000395060 PPOXP50336 477 aa11.66□□□□□ -0.54
CLIP2-203ENST00000395060 PTPRBP23467 1997 aa11.66□□□□□ -0.54
CLIP2-203ENST00000395060 OR2T8A6NH00 312 aa11.66□□□□□ -0.54
CLIP2-203ENST00000395060 VWC2LB2RUY7 222 aa11.66□□□□□ -0.54
CLIP2-203ENST00000395060 E7EUB6 86 aa11.66□□□□□ -0.54
CLIP2-203ENST00000395060 TMPRSS3P57727 454 aa11.66□□□□□ -0.54
CLIP2-203ENST00000395060 LDLRAD2Q5SZI1 272 aa11.66□□□□□ -0.54
CLIP2-203ENST00000395060 SSX8Q7RTT4 187 aa11.66□□□□□ -0.54
CLIP2-203ENST00000395060 GCSAMQ8N6F7 178 aa11.66□□□□□ -0.54
CLIP2-203ENST00000395060 WDR31Q8NA23 367 aa11.66□□□□□ -0.54
CLIP2-203ENST00000395060 ZNF596Q8TC21 504 aa11.66□□□□□ -0.54
CLIP2-203ENST00000395060 TRAV9-2A0A087WT02 112 aa11.66□□□□□ -0.54
CLIP2-203ENST00000395060 SMIM27A0A1W2PRY6 76 aa11.66□□□□□ -0.54
CLIP2-203ENST00000395060 OR4C46A6NHA9 309 aa11.66□□□□□ -0.54
CLIP2-203ENST00000395060 C8orf88P0DMB2 117 aa11.66□□□□□ -0.54
CLIP2-203ENST00000395060 PGLYRP4Q96LB8 373 aa11.66□□□□□ -0.54
CLIP2-203ENST00000395060 JPT1Q9UK76 154 aa11.66□□□□□ -0.54
CLIP2-203ENST00000395060 DSCAMO60469 2012 aa11.65□□□□□ -0.54
CLIP2-203ENST00000395060 MOSP00540 346 aa11.65□□□□□ -0.54
CLIP2-203ENST00000395060 KLF3P57682 345 aaPredicted RBP11.65□□□□□ -0.54
CLIP2-203ENST00000395060 MRPL52Q86TS9 123 aaKnown RBP11.65□□□□□ -0.54
CLIP2-203ENST00000395060 FAM90A1Q86YD7 464 aa11.65□□□□□ -0.54
CLIP2-203ENST00000395060 ORAOV1Q8WV07 137 aa11.65□□□□□ -0.54
CLIP2-203ENST00000395060 COX7A2P2O60397 106 aa11.65□□□□□ -0.54
CLIP2-203ENST00000395060 PSG1P11464 419 aa11.65□□□□□ -0.54
CLIP2-203ENST00000395060 TAS2R45P59539 299 aa11.65□□□□□ -0.54
CLIP2-203ENST00000395060 Q71RC1 249 aaPredicted RBP11.65□□□□□ -0.54
CLIP2-203ENST00000395060 IGF2BP2-AS1Q96M15 143 aa11.65□□□□□ -0.54
CLIP2-203ENST00000395060 CCL13Q99616 98 aa11.65□□□□□ -0.54
CLIP2-203ENST00000395060 NAA38Q9BRA0 125 aaKnown RBP11.65□□□□□ -0.54
CLIP2-203ENST00000395060 SLC25A33Q9BSK2 321 aa11.65□□□□□ -0.54
CLIP2-203ENST00000395060 TMEM14BQ9NUH8 114 aa11.65□□□□□ -0.54
CLIP2-203ENST00000395060 TNFSF4P23510 183 aa11.64□□□□□ -0.55
CLIP2-203ENST00000395060 FAM216BQ8N7L0 139 aa11.64□□□□□ -0.55
CLIP2-203ENST00000395060 NPIPB3Q92617 1050 aa11.64□□□□□ -0.55
CLIP2-203ENST00000395060 MUC21A0A0G2JKD1 596 aa11.64□□□□□ -0.55
CLIP2-203ENST00000395060 MUC21A0A140T8X8 626 aa11.64□□□□□ -0.55
CLIP2-203ENST00000395060 MGST3O14880 152 aa11.64□□□□□ -0.55
CLIP2-203ENST00000395060 CCL11P51671 97 aa11.64□□□□□ -0.55
CLIP2-203ENST00000395060 TBR1Q16650 682 aa11.64□□□□□ -0.55
CLIP2-203ENST00000395060 MUC21Q5SSG8 566 aa11.64□□□□□ -0.55
CLIP2-203ENST00000395060 ITLN1Q8WWA0 313 aa11.64□□□□□ -0.55
CLIP2-203ENST00000395060 IGHV2OR16-5A0A0B4J2B6 119 aa11.64□□□□□ -0.55
CLIP2-203ENST00000395060 TEX50A0A1B0GTY4 177 aa11.64□□□□□ -0.55
CLIP2-203ENST00000395060 ZNF883P0CG24 379 aa11.64□□□□□ -0.55
CLIP2-203ENST00000395060 PAXXQ9BUH6 204 aa11.64□□□□□ -0.55
CLIP2-203ENST00000395060 TPPP3Q9BW30 176 aa11.64□□□□□ -0.55
CLIP2-203ENST00000395060 SLC25A2Q9BXI2 301 aa11.64□□□□□ -0.55
CLIP2-203ENST00000395060 SVEP1Q4LDE5 3571 aa11.64□□□□□ -0.55
CLIP2-203ENST00000395060 A0A087X0K7 114 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms