RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 ZNF2Q9BSG1 426 aaPredicted RBP15.22■□□□□ 0.03
CNEP1R1-201ENST00000389134 AUNIPQ9H7T9 357 aa15.22■□□□□ 0.03
CNEP1R1-201ENST00000389134 FAM212BQ9NTI7 297 aaPredicted RBP15.22■□□□□ 0.03
CNEP1R1-201ENST00000389134 TXNL4BQ9NX01 149 aaKnown RBP15.22■□□□□ 0.03
CNEP1R1-201ENST00000389134 TEX48A0A1B0GUV7 120 aa15.21■□□□□ 0.03
CNEP1R1-201ENST00000389134 HELTA6NFD8 242 aa15.21■□□□□ 0.03
CNEP1R1-201ENST00000389134 SMIM9A6NGZ8 99 aa15.21■□□□□ 0.03
CNEP1R1-201ENST00000389134 GPR31O00270 319 aa15.21■□□□□ 0.03
CNEP1R1-201ENST00000389134 EBAG9O00559 213 aa15.21■□□□□ 0.03
CNEP1R1-201ENST00000389134 TNP2Q05952 138 aa15.21■□□□□ 0.03
CNEP1R1-201ENST00000389134 RNF167Q9H6Y7 350 aa15.21■□□□□ 0.03
CNEP1R1-201ENST00000389134 DIABLOQ9NR28 239 aa15.21■□□□□ 0.03
CNEP1R1-201ENST00000389134 SNCAP37840 140 aa15.2■□□□□ 0.02
CNEP1R1-201ENST00000389134 RFX2P48378 723 aa15.2■□□□□ 0.02
CNEP1R1-201ENST00000389134 PPP5CP53041 499 aa15.2■□□□□ 0.02
CNEP1R1-201ENST00000389134 FAM3BP58499 235 aaPredicted RBP15.2■□□□□ 0.02
CNEP1R1-201ENST00000389134 ZNF705AQ6ZN79 300 aaPredicted RBP15.2■□□□□ 0.02
CNEP1R1-201ENST00000389134 TMEM230Q96A57 120 aa15.2■□□□□ 0.02
CNEP1R1-201ENST00000389134 SLC25A38Q96DW6 304 aa15.2■□□□□ 0.02
CNEP1R1-201ENST00000389134 SEC22AQ96IW7 307 aa15.2■□□□□ 0.02
CNEP1R1-201ENST00000389134 IFT46Q9NQC8 304 aa15.2■□□□□ 0.02
CNEP1R1-201ENST00000389134 APOBP04114 4563 aaKnown RBP15.2■□□□□ 0.02
CNEP1R1-201ENST00000389134 DMBT1Q9UGM3 2413 aaPredicted RBP15.19■□□□□ 0.02
CNEP1R1-201ENST00000389134 CORTO00230 105 aa15.19■□□□□ 0.02
CNEP1R1-201ENST00000389134 SCGB2A1O75556 95 aa15.19■□□□□ 0.02
CNEP1R1-201ENST00000389134 AP2S1P53680 142 aaPredicted RBP15.19■□□□□ 0.02
CNEP1R1-201ENST00000389134 EMP1P54849 157 aa15.19■□□□□ 0.02
CNEP1R1-201ENST00000389134 AQP4P55087 323 aa15.19■□□□□ 0.02
CNEP1R1-201ENST00000389134 OR5H6Q8NGV6 325 aa15.19■□□□□ 0.02
CNEP1R1-201ENST00000389134 NIPSNAP3BQ9BS92 247 aa15.19■□□□□ 0.02
CNEP1R1-201ENST00000389134 MEIS3P1A6NDR6 274 aa15.18■□□□□ 0.02
CNEP1R1-201ENST00000389134 ZNF705FA8MVS1 300 aaPredicted RBP15.18■□□□□ 0.02
CNEP1R1-201ENST00000389134 H3BMM0 161 aa15.18■□□□□ 0.02
CNEP1R1-201ENST00000389134 CLN5O75503 358 aa15.18■□□□□ 0.02
CNEP1R1-201ENST00000389134 ZNF705DP0CH99 300 aaPredicted RBP15.18■□□□□ 0.02
CNEP1R1-201ENST00000389134 ZNF705BP0CI00 300 aaPredicted RBP15.18■□□□□ 0.02
CNEP1R1-201ENST00000389134 SNRPD3P62318 126 aaKnown RBP15.18■□□□□ 0.02
CNEP1R1-201ENST00000389134 SEPSECSQ9HD40 501 aaKnown RBP15.18■□□□□ 0.02
CNEP1R1-201ENST00000389134 SCRT2Q9NQ03 307 aa15.18■□□□□ 0.02
CNEP1R1-201ENST00000389134 DKK2Q9UBU2 259 aa15.18■□□□□ 0.02
CNEP1R1-201ENST00000389134 S100GP29377 79 aa15.17■□□□□ 0.02
CNEP1R1-201ENST00000389134 SUB1P53999 127 aaKnown RBP eCLIP15.17■□□□□ 0.02
CNEP1R1-201ENST00000389134 U3KQE9 123 aa15.17■□□□□ 0.02
CNEP1R1-201ENST00000389134 OXA1LQ15070 435 aa15.16■□□□□ 0.02
CNEP1R1-201ENST00000389134 PHLDA2Q53GA4 152 aa15.16■□□□□ 0.02
CNEP1R1-201ENST00000389134 OR4X1Q8NH49 305 aa15.16■□□□□ 0.02
CNEP1R1-201ENST00000389134 FXYD6Q9H0Q3 95 aa15.16■□□□□ 0.02
CNEP1R1-201ENST00000389134 BLOC1S6Q9UL45 172 aa15.16■□□□□ 0.02
CNEP1R1-201ENST00000389134 TMED3Q9Y3Q3 217 aa15.16■□□□□ 0.02
CNEP1R1-201ENST00000389134 RFNGQ9Y644 331 aa15.16■□□□□ 0.02
CNEP1R1-201ENST00000389134 DNAH5Q8TE73 4624 aa15.15■□□□□ 0.02
CNEP1R1-201ENST00000389134 INS-IGF2F8WCM5 200 aa15.15■□□□□ 0.02
CNEP1R1-201ENST00000389134 PMP2P02689 132 aa15.15■□□□□ 0.02
CNEP1R1-201ENST00000389134 TAS2R46P59540 309 aa15.15■□□□□ 0.02
CNEP1R1-201ENST00000389134 SPINK9Q5DT21 86 aa15.15■□□□□ 0.02
CNEP1R1-201ENST00000389134 FAM222AQ5U5X8 452 aa15.15■□□□□ 0.02
CNEP1R1-201ENST00000389134 LPCAT3Q6P1A2 487 aa15.15■□□□□ 0.02
CNEP1R1-201ENST00000389134 OR5H2Q8NGV7 314 aa15.15■□□□□ 0.02
CNEP1R1-201ENST00000389134 OR6F1Q8NGZ6 308 aa15.15■□□□□ 0.02
CNEP1R1-201ENST00000389134 GLMPQ8WWB7 406 aa15.15■□□□□ 0.02
CNEP1R1-201ENST00000389134 SSR3Q9UNL2 185 aa15.15■□□□□ 0.02
CNEP1R1-201ENST00000389134 FAM90A26D6RGX4 464 aa15.14■□□□□ 0.01
CNEP1R1-201ENST00000389134 IGKV1-39P01597 117 aa15.14■□□□□ 0.01
CNEP1R1-201ENST00000389134 IGKV1D-39P04432 117 aa15.14■□□□□ 0.01
CNEP1R1-201ENST00000389134 HLA-DRB4P13762 266 aa15.14■□□□□ 0.01
CNEP1R1-201ENST00000389134 HTN3P15516 51 aa15.14■□□□□ 0.01
CNEP1R1-201ENST00000389134 SDC2P34741 201 aa15.14■□□□□ 0.01
CNEP1R1-201ENST00000389134 C16orf54Q6UWD8 224 aa15.14■□□□□ 0.01
CNEP1R1-201ENST00000389134 MRGPRFQ96AM1 343 aa15.14■□□□□ 0.01
CNEP1R1-201ENST00000389134 MRPL36Q9P0J6 103 aaKnown RBP15.14■□□□□ 0.01
CNEP1R1-201ENST00000389134 HLA-DRB4X5D2U9 266 aa15.14■□□□□ 0.01
CNEP1R1-201ENST00000389134 TRAV30A0A087WSZ9 112 aa15.13■□□□□ 0.01
CNEP1R1-201ENST00000389134 OPRK1P41145 380 aa15.13■□□□□ 0.01
CNEP1R1-201ENST00000389134 IDNKQ5T6J7 187 aa15.13■□□□□ 0.01
CNEP1R1-201ENST00000389134 TMEM88Q6PEY1 159 aa15.13■□□□□ 0.01
CNEP1R1-201ENST00000389134 TBC1D26Q86UD7 250 aa15.13■□□□□ 0.01
CNEP1R1-201ENST00000389134 C6orf223Q8N319 242 aa15.13■□□□□ 0.01
CNEP1R1-201ENST00000389134 SLC35G3Q8N808 338 aa15.13■□□□□ 0.01
CNEP1R1-201ENST00000389134 C15orf53Q8NAA6 179 aa15.13■□□□□ 0.01
CNEP1R1-201ENST00000389134 FNDC4Q9H6D8 234 aaPredicted RBP15.13■□□□□ 0.01
CNEP1R1-201ENST00000389134 ANAPC10Q9UM13 185 aa15.13■□□□□ 0.01
CNEP1R1-201ENST00000389134 IGHV3OR16-12A0A075B7B8 117 aa15.12■□□□□ 0.01
CNEP1R1-201ENST00000389134 IGKV1-17P01599 117 aa15.12■□□□□ 0.01
CNEP1R1-201ENST00000389134 HNRNPCP07910 306 aaKnown RBP eCLIP15.12■□□□□ 0.01
CNEP1R1-201ENST00000389134 RNASE2P10153 161 aaKnown RBP15.12■□□□□ 0.01
CNEP1R1-201ENST00000389134 RPL5P46777 297 aaKnown RBP15.12■□□□□ 0.01
CNEP1R1-201ENST00000389134 HOXA1P49639 335 aaPredicted RBP15.12■□□□□ 0.01
CNEP1R1-201ENST00000389134 MXD1Q05195 221 aa15.12■□□□□ 0.01
CNEP1R1-201ENST00000389134 YTHDF1Q9BYJ9 559 aaKnown RBP15.12■□□□□ 0.01
CNEP1R1-201ENST00000389134 NRN1Q9NPD7 142 aa15.12■□□□□ 0.01
CNEP1R1-201ENST00000389134 NBDYA0A0U1RRE5 68 aa15.11■□□□□ 0.01
CNEP1R1-201ENST00000389134 NAT1P18440 290 aa15.11■□□□□ 0.01
CNEP1R1-201ENST00000389134 MLANAQ16655 118 aa15.11■□□□□ 0.01
CNEP1R1-201ENST00000389134 TIGITQ495A1 244 aa15.11■□□□□ 0.01
CNEP1R1-201ENST00000389134 ATG101Q9BSB4 218 aa15.11■□□□□ 0.01
CNEP1R1-201ENST00000389134 CLEC2LP0C7M8 214 aa15.1■□□□□ 0.01
CNEP1R1-201ENST00000389134 NKX2-1P43699 371 aaPredicted RBP15.1■□□□□ 0.01
CNEP1R1-201ENST00000389134 Q8WTZ3 238 aa15.1■□□□□ 0.01
CNEP1R1-201ENST00000389134 PSMB9P28065 219 aa15.09■□□□□ 0.01
CNEP1R1-201ENST00000389134 PDCD10Q9BUL8 212 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms