RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 KAAG1Q9UBP8 84 aa11.6□□□□□ -0.55
CLCN4-201ENST00000380829 C15orf61A6NNL5 157 aa11.59□□□□□ -0.55
CLCN4-201ENST00000380829 HNRNPA3P51991 378 aaKnown RBP11.59□□□□□ -0.55
CLCN4-201ENST00000380829 SERF2P84101 59 aa11.59□□□□□ -0.55
CLCN4-201ENST00000380829 Q8N976 141 aa11.59□□□□□ -0.55
CLCN4-201ENST00000380829 PARD6GQ9BYG4 376 aaPredicted RBP11.59□□□□□ -0.55
CLCN4-201ENST00000380829 TCF19Q9Y242 345 aa11.59□□□□□ -0.55
CLCN4-201ENST00000380829 HRNRQ86YZ3 2850 aaPredicted RBP11.59□□□□□ -0.55
CLCN4-201ENST00000380829 SRRM4A7MD48 611 aaKnown RBP11.59□□□□□ -0.55
CLCN4-201ENST00000380829 RRHO14718 337 aa11.59□□□□□ -0.55
CLCN4-201ENST00000380829 HYPMO75409 117 aa11.59□□□□□ -0.55
CLCN4-201ENST00000380829 CTRLP40313 264 aa11.59□□□□□ -0.55
CLCN4-201ENST00000380829 VDAC2P45880 294 aaPredicted RBP11.59□□□□□ -0.55
CLCN4-201ENST00000380829 PAFAH1B2P68402 229 aa11.59□□□□□ -0.55
CLCN4-201ENST00000380829 DIAPH2-AS1Q14236 149 aa11.59□□□□□ -0.55
CLCN4-201ENST00000380829 ZNF833PQ6ZTB9 187 aa11.59□□□□□ -0.55
CLCN4-201ENST00000380829 ABHD12Q8N2K0 398 aa11.59□□□□□ -0.55
CLCN4-201ENST00000380829 OR52E5Q8NH55 327 aa11.59□□□□□ -0.55
CLCN4-201ENST00000380829 SLC45A2Q9UMX9 530 aa11.59□□□□□ -0.55
CLCN4-201ENST00000380829 DLX1P56177 255 aa11.58□□□□□ -0.56
CLCN4-201ENST00000380829 RTL8BQ17RB0 113 aa11.58□□□□□ -0.56
CLCN4-201ENST00000380829 OR4B1Q8NGF8 309 aa11.58□□□□□ -0.56
CLCN4-201ENST00000380829 OR10X1Q8NGY0 326 aa11.58□□□□□ -0.56
CLCN4-201ENST00000380829 TMEM204Q9BSN7 226 aa11.58□□□□□ -0.56
CLCN4-201ENST00000380829 DIRC3C9JPN6 131 aa11.58□□□□□ -0.56
CLCN4-201ENST00000380829 FRMD6-AS1P0C7T7 363 aa11.58□□□□□ -0.56
CLCN4-201ENST00000380829 CRISP2P16562 243 aa11.58□□□□□ -0.56
CLCN4-201ENST00000380829 DLX6P56179 175 aa11.58□□□□□ -0.56
CLCN4-201ENST00000380829 PRB3Q04118 309 aaPredicted RBP11.58□□□□□ -0.56
CLCN4-201ENST00000380829 TMEM155Q4W5P6 130 aa11.58□□□□□ -0.56
CLCN4-201ENST00000380829 BAGE3Q86Y29 109 aa11.58□□□□□ -0.56
CLCN4-201ENST00000380829 BAGE2Q86Y30 109 aa11.58□□□□□ -0.56
CLCN4-201ENST00000380829 NEIL1Q96FI4 390 aaPredicted RBP11.58□□□□□ -0.56
CLCN4-201ENST00000380829 HINT2Q9BX68 163 aa11.58□□□□□ -0.56
CLCN4-201ENST00000380829 COX11Q9Y6N1 276 aa11.58□□□□□ -0.56
CLCN4-201ENST00000380829 UBE2G2P60604 165 aa11.57□□□□□ -0.56
CLCN4-201ENST00000380829 SUMO1P63165 101 aaKnown RBP11.57□□□□□ -0.56
CLCN4-201ENST00000380829 OR4C5Q8NGB2 326 aa11.57□□□□□ -0.56
CLCN4-201ENST00000380829 NPCDR1Q9BY65 106 aa11.57□□□□□ -0.56
CLCN4-201ENST00000380829 TMEM14BQ9NUH8 114 aa11.57□□□□□ -0.56
CLCN4-201ENST00000380829 HIVEP3Q5T1R4 2406 aa11.57□□□□□ -0.56
CLCN4-201ENST00000380829 C11orf94C9JXX5 98 aa11.57□□□□□ -0.56
CLCN4-201ENST00000380829 J3QR06 171 aa11.57□□□□□ -0.56
CLCN4-201ENST00000380829 IGLC2P0DOY2 106 aa11.57□□□□□ -0.56
CLCN4-201ENST00000380829 IGLC3P0DOY3 106 aa11.57□□□□□ -0.56
CLCN4-201ENST00000380829 PDLIM3Q53GG5 364 aaPredicted RBP11.57□□□□□ -0.56
CLCN4-201ENST00000380829 ATOH7Q8N100 152 aa11.57□□□□□ -0.56
CLCN4-201ENST00000380829 VPS25Q9BRG1 176 aa11.57□□□□□ -0.56
CLCN4-201ENST00000380829 WNT10AQ9GZT5 417 aa11.57□□□□□ -0.56
CLCN4-201ENST00000380829 GSX1Q9H4S2 264 aaPredicted RBP11.57□□□□□ -0.56
CLCN4-201ENST00000380829 UQCR10Q9UDW1 63 aa11.57□□□□□ -0.56
CLCN4-201ENST00000380829 FOXA2Q9Y261 457 aaPredicted RBP11.57□□□□□ -0.56
CLCN4-201ENST00000380829 SPTBN1Q01082 2364 aaKnown RBP11.57□□□□□ -0.56
CLCN4-201ENST00000380829 VENTXO95231 258 aa11.56□□□□□ -0.56
CLCN4-201ENST00000380829 TOMM40O96008 361 aa11.56□□□□□ -0.56
CLCN4-201ENST00000380829 UQCRFS1P47985 274 aa11.56□□□□□ -0.56
CLCN4-201ENST00000380829 ATP5G3P48201 142 aa11.56□□□□□ -0.56
CLCN4-201ENST00000380829 VWC2Q2TAL6 325 aa11.56□□□□□ -0.56
CLCN4-201ENST00000380829 FBLN7Q53RD9 439 aa11.56□□□□□ -0.56
CLCN4-201ENST00000380829 MRPL18Q9H0U6 180 aaKnown RBP11.56□□□□□ -0.56
CLCN4-201ENST00000380829 RALYQ9UKM9 306 aaKnown RBP11.56□□□□□ -0.56
CLCN4-201ENST00000380829 TIMM9Q9Y5J7 89 aa11.56□□□□□ -0.56
CLCN4-201ENST00000380829 IGHV1-8P0DP01 117 aa11.56□□□□□ -0.56
CLCN4-201ENST00000380829 PPOXP50336 477 aa11.56□□□□□ -0.56
CLCN4-201ENST00000380829 HSPE1P61604 102 aaKnown RBP11.56□□□□□ -0.56
CLCN4-201ENST00000380829 GNB1P62873 340 aa11.56□□□□□ -0.56
CLCN4-201ENST00000380829 POU2AF1Q16633 256 aa11.56□□□□□ -0.56
CLCN4-201ENST00000380829 OR10G9Q8NGN4 311 aa11.56□□□□□ -0.56
CLCN4-201ENST00000380829 OR10G7Q8NGN6 311 aa11.56□□□□□ -0.56
CLCN4-201ENST00000380829 OR51B2Q9Y5P1 312 aa11.56□□□□□ -0.56
CLCN4-201ENST00000380829 CTXND1A0A1B0GTU2 59 aa11.55□□□□□ -0.56
CLCN4-201ENST00000380829 H0YJW9 148 aa11.55□□□□□ -0.56
CLCN4-201ENST00000380829 NDUFB4O95168 129 aa11.55□□□□□ -0.56
CLCN4-201ENST00000380829 SAA1P0DJI8 122 aaPredicted RBP11.55□□□□□ -0.56
CLCN4-201ENST00000380829 CD1BP29016 333 aa11.55□□□□□ -0.56
CLCN4-201ENST00000380829 ZNF841Q6ZN19 808 aa11.55□□□□□ -0.56
CLCN4-201ENST00000380829 ZNF738Q8NE65 137 aa11.55□□□□□ -0.56
CLCN4-201ENST00000380829 HARBI1Q96MB7 349 aa11.55□□□□□ -0.56
CLCN4-201ENST00000380829 TBL2Q9Y4P3 447 aaKnown RBP11.55□□□□□ -0.56
CLCN4-201ENST00000380829 TACC2O95359 2948 aa11.55□□□□□ -0.56
CLCN4-201ENST00000380829 MALRD1Q5VYJ5 2156 aa11.55□□□□□ -0.56
CLCN4-201ENST00000380829 LOC102724200A0A096LPH7 203 aaPredicted RBP11.55□□□□□ -0.56
CLCN4-201ENST00000380829 APOA2P02652 100 aa11.55□□□□□ -0.56
CLCN4-201ENST00000380829 YPEL3P61236 119 aaPredicted RBP11.55□□□□□ -0.56
CLCN4-201ENST00000380829 SFRP2Q96HF1 295 aa11.55□□□□□ -0.56
CLCN4-201ENST00000380829 TNCP24821 2201 aa11.55□□□□□ -0.56
CLCN4-201ENST00000380829 CFAP46Q8IYW2 2715 aa11.54□□□□□ -0.56
CLCN4-201ENST00000380829 TRBV20OR9-2A0A075B6H5 130 aa11.54□□□□□ -0.56
CLCN4-201ENST00000380829 A6NJY4 79 aa11.54□□□□□ -0.56
CLCN4-201ENST00000380829 UPK2O00526 184 aa11.54□□□□□ -0.56
CLCN4-201ENST00000380829 CIDEAO60543 219 aa11.54□□□□□ -0.56
CLCN4-201ENST00000380829 ESDP10768 282 aa11.54□□□□□ -0.56
CLCN4-201ENST00000380829 PMCHP20382 165 aa11.54□□□□□ -0.56
CLCN4-201ENST00000380829 FOXL1Q12952 345 aa11.54□□□□□ -0.56
CLCN4-201ENST00000380829 SIGLECL1Q8N7X8 197 aa11.54□□□□□ -0.56
CLCN4-201ENST00000380829 RNF2Q99496 336 aa11.54□□□□□ -0.56
CLCN4-201ENST00000380829 ENY2Q9NPA8 101 aa11.54□□□□□ -0.56
CLCN4-201ENST00000380829 COL12A1Q99715 3063 aa11.54□□□□□ -0.56
CLCN4-201ENST00000380829 PRSS46E5RG02 174 aa11.54□□□□□ -0.56
CLCN4-201ENST00000380829 SLC24A4Q8NFF2 622 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms