RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 Q8IYB0 196 aa12.78□□□□□ -0.36
CSNK1A1-202ENST00000377843 OR4A5Q8NH83 315 aa12.78□□□□□ -0.36
CSNK1A1-202ENST00000377843 LRRC29Q8WV35 223 aa12.78□□□□□ -0.36
CSNK1A1-202ENST00000377843 WFDC12Q8WWY7 111 aa12.78□□□□□ -0.36
CSNK1A1-202ENST00000377843 KLF13Q9Y2Y9 288 aaPredicted RBP12.78□□□□□ -0.36
CSNK1A1-202ENST00000377843 TMEM238LA0A1B0GVL6 79 aa12.78□□□□□ -0.36
CSNK1A1-202ENST00000377843 PINLYPA6NC86 204 aa12.78□□□□□ -0.36
CSNK1A1-202ENST00000377843 AGFG2O95081 481 aa12.78□□□□□ -0.36
CSNK1A1-202ENST00000377843 CER1O95813 267 aa12.78□□□□□ -0.36
CSNK1A1-202ENST00000377843 SP9P0CG40 484 aa12.78□□□□□ -0.36
CSNK1A1-202ENST00000377843 TEX45Q8NA69 505 aa12.78□□□□□ -0.36
CSNK1A1-202ENST00000377843 MS4A6AQ9H2W1 248 aa12.78□□□□□ -0.36
CSNK1A1-202ENST00000377843 C7orf69Q9H7B7 122 aa12.78□□□□□ -0.36
CSNK1A1-202ENST00000377843 POLDIP2Q9Y2S7 368 aa12.78□□□□□ -0.36
CSNK1A1-202ENST00000377843 HILPDAQ9Y5L2 63 aa12.78□□□□□ -0.36
CSNK1A1-202ENST00000377843 A0A1W2PQM1 296 aa12.77□□□□□ -0.36
CSNK1A1-202ENST00000377843 C9orf172C9J069 976 aa12.77□□□□□ -0.36
CSNK1A1-202ENST00000377843 APOA2P02652 100 aa12.77□□□□□ -0.36
CSNK1A1-202ENST00000377843 GDF1P27539 372 aa12.77□□□□□ -0.36
CSNK1A1-202ENST00000377843 MLANAQ16655 118 aa12.77□□□□□ -0.36
CSNK1A1-202ENST00000377843 C1orf229Q6ZS94 237 aaPredicted RBP12.77□□□□□ -0.36
CSNK1A1-202ENST00000377843 GTF2H5Q6ZYL4 71 aa12.77□□□□□ -0.36
CSNK1A1-202ENST00000377843 TMEM251Q8N6I4 163 aa12.77□□□□□ -0.36
CSNK1A1-202ENST00000377843 CHCHD1Q96BP2 118 aaKnown RBP12.77□□□□□ -0.36
CSNK1A1-202ENST00000377843 DOCK7Q96N67 2140 aa12.77□□□□□ -0.36
CSNK1A1-202ENST00000377843 FAM90A9PA6NNJ1 464 aa12.77□□□□□ -0.37
CSNK1A1-202ENST00000377843 GPR12P47775 334 aa12.77□□□□□ -0.37
CSNK1A1-202ENST00000377843 NHLH1Q02575 133 aa12.77□□□□□ -0.37
CSNK1A1-202ENST00000377843 SGK494Q96LW2 274 aa12.77□□□□□ -0.37
CSNK1A1-202ENST00000377843 LINC00470Q9BZP3 86 aa12.77□□□□□ -0.37
CSNK1A1-202ENST00000377843 OCIAD1Q9NX40 245 aa12.77□□□□□ -0.37
CSNK1A1-202ENST00000377843 TIMM8BQ9Y5J9 83 aaPredicted RBP12.77□□□□□ -0.37
CSNK1A1-202ENST00000377843 TRGV8A0A0C4DH27 118 aa12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 LAMTOR5O43504 91 aa12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 NCR2O95944 276 aa12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 FGF6P10767 208 aa12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 SEC11AP67812 179 aa12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 GUSBP11Q6P575 273 aa12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 PET117Q6UWS5 81 aa12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 BHLHA15Q7RTS1 189 aaPredicted RBP12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 BPIFA4PQ86YQ2 179 aa12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 FAM167A-AS1Q96KT0 104 aa12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 OR51B2Q9Y5P1 312 aa12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 IGHV5-10-1A0A0J9YXX1 117 aa12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 KLK10O43240 276 aa12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 HOXC12P31275 282 aa12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 UTF1Q5T230 341 aa12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 SLC25A33Q9BSK2 321 aa12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 SLC25A2Q9BXI2 301 aa12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 MAP1LC3CQ9BXW4 147 aa12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 NPFFR1Q9GZQ6 430 aa12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 AMMECR1Q9Y4X0 333 aaPredicted RBP12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 IGKV3D-15A0A087WSY6 115 aa12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 H3BRM9 83 aa12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 HIST1H1EP10412 219 aaKnown RBP12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 PLP2Q04941 152 aa12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 TMEM108Q6UXF1 575 aa12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 LINC00322Q6ZN03 302 aaPredicted RBP12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 ABI3Q9P2A4 366 aa12.76□□□□□ -0.37
CSNK1A1-202ENST00000377843 C15orf65H3BRN8 121 aa12.75□□□□□ -0.37
CSNK1A1-202ENST00000377843 PYYP10082 97 aa12.75□□□□□ -0.37
CSNK1A1-202ENST00000377843 BMI1P35226 326 aa12.75□□□□□ -0.37
CSNK1A1-202ENST00000377843 ZNF137PP52743 207 aa12.75□□□□□ -0.37
CSNK1A1-202ENST00000377843 HBBP68871 147 aa12.75□□□□□ -0.37
CSNK1A1-202ENST00000377843 LINC01545Q5VT33 79 aa12.75□□□□□ -0.37
CSNK1A1-202ENST00000377843 TMEM105Q8N8V8 129 aa12.75□□□□□ -0.37
CSNK1A1-202ENST00000377843 OR2K2Q8NGT1 345 aa12.75□□□□□ -0.37
CSNK1A1-202ENST00000377843 OR9G1Q8NH87 305 aa12.75□□□□□ -0.37
CSNK1A1-202ENST00000377843 GTSF1Q8WW33 167 aa12.75□□□□□ -0.37
CSNK1A1-202ENST00000377843 PPIAL4EA0A075B759 164 aa12.75□□□□□ -0.37
CSNK1A1-202ENST00000377843 PPIAL4CA0A0B4J2A2 164 aa12.75□□□□□ -0.37
CSNK1A1-202ENST00000377843 C15orf61A6NNL5 157 aa12.75□□□□□ -0.37
CSNK1A1-202ENST00000377843 NDUFS8O00217 210 aa12.75□□□□□ -0.37
CSNK1A1-202ENST00000377843 PPIAL4FP0DN26 164 aa12.75□□□□□ -0.37
CSNK1A1-202ENST00000377843 ERVK-16P61578 105 aa12.75□□□□□ -0.37
CSNK1A1-202ENST00000377843 GNG5P63218 68 aa12.75□□□□□ -0.37
CSNK1A1-202ENST00000377843 MEF2CQ06413 473 aaPredicted RBP12.75□□□□□ -0.37
CSNK1A1-202ENST00000377843 PMS2CLQ68D20 193 aa12.75□□□□□ -0.37
CSNK1A1-202ENST00000377843 OR10AG1Q8NH19 301 aa12.75□□□□□ -0.37
CSNK1A1-202ENST00000377843 HINT2Q9BX68 163 aa12.75□□□□□ -0.37
CSNK1A1-202ENST00000377843 GTSF1LQ9H1H1 148 aa12.75□□□□□ -0.37
CSNK1A1-202ENST00000377843 RABAC1Q9UI14 185 aa12.75□□□□□ -0.37
CSNK1A1-202ENST00000377843 PILRBQ9UKJ0 227 aa12.75□□□□□ -0.37
CSNK1A1-202ENST00000377843 A0A0G2JLM5 398 aa12.74□□□□□ -0.37
CSNK1A1-202ENST00000377843 KLF7O75840 302 aaPredicted RBP12.74□□□□□ -0.37
CSNK1A1-202ENST00000377843 C8orf88P0DMB2 117 aa12.74□□□□□ -0.37
CSNK1A1-202ENST00000377843 AZU1P20160 251 aa12.74□□□□□ -0.37
CSNK1A1-202ENST00000377843 ZNF134P52741 427 aa12.74□□□□□ -0.37
CSNK1A1-202ENST00000377843 UBE2L3P68036 154 aaKnown RBP12.74□□□□□ -0.37
CSNK1A1-202ENST00000377843 KIR3DS1Q14943 382 aa12.74□□□□□ -0.37
CSNK1A1-202ENST00000377843 ATP5L2Q7Z4Y8 100 aa12.74□□□□□ -0.37
CSNK1A1-202ENST00000377843 C1orf210Q8IVY1 113 aa12.74□□□□□ -0.37
CSNK1A1-202ENST00000377843 RAB37Q96AX2 223 aa12.74□□□□□ -0.37
CSNK1A1-202ENST00000377843 LIPFP07098 398 aa12.74□□□□□ -0.37
CSNK1A1-202ENST00000377843 TCTAP57738 103 aa12.74□□□□□ -0.37
CSNK1A1-202ENST00000377843 ZNF329Q86UD4 541 aa12.74□□□□□ -0.37
CSNK1A1-202ENST00000377843 TMUB1Q9BVT8 246 aa12.74□□□□□ -0.37
CSNK1A1-202ENST00000377843 PEX7O00628 323 aa12.73□□□□□ -0.37
CSNK1A1-202ENST00000377843 TMEM116Q8NCL8 245 aa12.73□□□□□ -0.37
CSNK1A1-202ENST00000377843 PERPQ96FX8 193 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms