RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 PROK1P58294 105 aa17.85■□□□□ 0.45
HLA-C-202ENST00000376237 ATP5G2Q06055 141 aa17.85■□□□□ 0.45
HLA-C-202ENST00000376237 C10orf99Q6UWK7 81 aa17.85■□□□□ 0.45
HLA-C-202ENST00000376237 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.85■□□□□ 0.45
HLA-C-202ENST00000376237 SCARB1Q8WTV0 552 aa17.85■□□□□ 0.45
HLA-C-202ENST00000376237 SLC35E1Q96K37 410 aa17.85■□□□□ 0.45
HLA-C-202ENST00000376237 TMEM147Q9BVK8 224 aa17.85■□□□□ 0.45
HLA-C-202ENST00000376237 JMJD1CQ15652 2540 aa17.85■□□□□ 0.45
HLA-C-202ENST00000376237 C4BPBP20851 252 aa17.84■□□□□ 0.45
HLA-C-202ENST00000376237 MLANAQ16655 118 aa17.84■□□□□ 0.45
HLA-C-202ENST00000376237 PRIMA1Q86XR5 153 aa17.84■□□□□ 0.45
HLA-C-202ENST00000376237 C9orf62Q8N4C0 152 aa17.84■□□□□ 0.45
HLA-C-202ENST00000376237 TMEM116Q8NCL8 245 aa17.84■□□□□ 0.45
HLA-C-202ENST00000376237 BSCL2Q96G97 398 aaPredicted RBP17.84■□□□□ 0.45
HLA-C-202ENST00000376237 ARL6Q9H0F7 186 aa17.84■□□□□ 0.45
HLA-C-202ENST00000376237 NPVFQ9HCQ7 196 aa17.84■□□□□ 0.45
HLA-C-202ENST00000376237 UQCC1Q9NVA1 299 aa17.84■□□□□ 0.45
HLA-C-202ENST00000376237 FBXL17Q9UF56 701 aa17.84■□□□□ 0.45
HLA-C-202ENST00000376237 MFAP4P55083 255 aa17.83■□□□□ 0.45
HLA-C-202ENST00000376237 GAMTQ14353 236 aa17.83■□□□□ 0.45
HLA-C-202ENST00000376237 CLINT1Q14677 625 aa17.83■□□□□ 0.45
HLA-C-202ENST00000376237 VWC2Q2TAL6 325 aa17.83■□□□□ 0.45
HLA-C-202ENST00000376237 TMUB2Q71RG4 321 aa17.83■□□□□ 0.45
HLA-C-202ENST00000376237 EEF1AKMT3Q96AZ1 226 aa17.83■□□□□ 0.45
HLA-C-202ENST00000376237 ATP6V0BQ99437 205 aa17.83■□□□□ 0.45
HLA-C-202ENST00000376237 TXN2Q99757 166 aa17.83■□□□□ 0.45
HLA-C-202ENST00000376237 ATP5SQ99766 215 aa17.83■□□□□ 0.45
HLA-C-202ENST00000376237 C21orf62Q9NYP8 219 aa17.83■□□□□ 0.45
HLA-C-202ENST00000376237 C2CD3Q4AC94 2353 aa17.83■□□□□ 0.45
HLA-C-202ENST00000376237 TRBV7-1A0A0A6YYK4 115 aa17.82■□□□□ 0.44
HLA-C-202ENST00000376237 HAX1O00165 279 aa17.82■□□□□ 0.44
HLA-C-202ENST00000376237 FCGR2BP31994 310 aaPredicted RBP17.82■□□□□ 0.44
HLA-C-202ENST00000376237 NKX2-5P52952 324 aaPredicted RBP17.82■□□□□ 0.44
HLA-C-202ENST00000376237 ZNF266Q14584 549 aa17.82■□□□□ 0.44
HLA-C-202ENST00000376237 FAM209BQ5JX69 171 aa17.82■□□□□ 0.44
HLA-C-202ENST00000376237 ACSM6Q6P461 480 aa17.82■□□□□ 0.44
HLA-C-202ENST00000376237 OR4X1Q8NH49 305 aa17.82■□□□□ 0.44
HLA-C-202ENST00000376237 MYOZ3Q8TDC0 251 aa17.82■□□□□ 0.44
HLA-C-202ENST00000376237 ARPC5LQ9BPX5 153 aa17.82■□□□□ 0.44
HLA-C-202ENST00000376237 SMIM3Q9BZL3 60 aa17.82■□□□□ 0.44
HLA-C-202ENST00000376237 GAR1Q9NY12 217 aaKnown RBP17.82■□□□□ 0.44
HLA-C-202ENST00000376237 KANTRA0A1W2PQU2 76 aa17.82■□□□□ 0.44
HLA-C-202ENST00000376237 MFSD2BA6NFX1 497 aa17.82■□□□□ 0.44
HLA-C-202ENST00000376237 NPBWR1P48145 328 aa17.82■□□□□ 0.44
HLA-C-202ENST00000376237 LAMTOR1Q6IAA8 161 aa17.82■□□□□ 0.44
HLA-C-202ENST00000376237 WFDC12Q8WWY7 111 aa17.82■□□□□ 0.44
HLA-C-202ENST00000376237 IGHV3-21A0A0B4J1V1 117 aa17.81■□□□□ 0.44
HLA-C-202ENST00000376237 SMCO3A2RU48 225 aa17.81■□□□□ 0.44
HLA-C-202ENST00000376237 RPLP1P05386 114 aaKnown RBP17.81■□□□□ 0.44
HLA-C-202ENST00000376237 TMEM144Q7Z5S9 345 aa17.81■□□□□ 0.44
HLA-C-202ENST00000376237 UBE2E2Q96LR5 201 aa17.81■□□□□ 0.44
HLA-C-202ENST00000376237 BCL2L11O43521 198 aa17.8■□□□□ 0.44
HLA-C-202ENST00000376237 IFNA5P01569 189 aa17.8■□□□□ 0.44
HLA-C-202ENST00000376237 IGHV3-48P01763 117 aa17.8■□□□□ 0.44
HLA-C-202ENST00000376237 RND2P52198 227 aa17.8■□□□□ 0.44
HLA-C-202ENST00000376237 AKR1C1Q04828 323 aa17.8■□□□□ 0.44
HLA-C-202ENST00000376237 KIAA0141Q14154 515 aaPredicted RBP17.8■□□□□ 0.44
HLA-C-202ENST00000376237 LCNL1Q6ZST4 164 aa17.8■□□□□ 0.44
HLA-C-202ENST00000376237 ZNF491Q8N8L2 437 aa17.8■□□□□ 0.44
HLA-C-202ENST00000376237 ZNF502Q8TBZ5 544 aa17.8■□□□□ 0.44
HLA-C-202ENST00000376237 NPIPB3Q92617 1050 aa17.8■□□□□ 0.44
HLA-C-202ENST00000376237 ACY3Q96HD9 319 aa17.8■□□□□ 0.44
HLA-C-202ENST00000376237 BORCS7-ASMTA0A0B4J1R7 106 aa17.79■□□□□ 0.44
HLA-C-202ENST00000376237 JTBO76095 146 aa17.79■□□□□ 0.44
HLA-C-202ENST00000376237 DEFA5Q01523 94 aa17.79■□□□□ 0.44
HLA-C-202ENST00000376237 TREML4Q6UXN2 200 aa17.79■□□□□ 0.44
HLA-C-202ENST00000376237 TRAV30A0A087WSZ9 112 aa17.78■□□□□ 0.44
HLA-C-202ENST00000376237 CLN5O75503 358 aa17.78■□□□□ 0.44
HLA-C-202ENST00000376237 SCGB2A1O75556 95 aa17.78■□□□□ 0.44
HLA-C-202ENST00000376237 CDX1P47902 265 aaPredicted RBP17.78■□□□□ 0.44
HLA-C-202ENST00000376237 KRTAP24-1Q3LI83 254 aa17.78■□□□□ 0.44
HLA-C-202ENST00000376237 ZNF343Q6P1L6 599 aa17.78■□□□□ 0.44
HLA-C-202ENST00000376237 TEPPQ6URK8 271 aa17.78■□□□□ 0.44
HLA-C-202ENST00000376237 PARD6GQ9BYG4 376 aaPredicted RBP17.78■□□□□ 0.44
HLA-C-202ENST00000376237 WFDC1Q9HC57 220 aa17.78■□□□□ 0.44
HLA-C-202ENST00000376237 MRPL36Q9P0J6 103 aaKnown RBP17.78■□□□□ 0.44
HLA-C-202ENST00000376237 GNG7O60262 68 aa17.77■□□□□ 0.44
HLA-C-202ENST00000376237 MPDU1O75352 247 aa17.77■□□□□ 0.44
HLA-C-202ENST00000376237 Q56UQ5 140 aa17.77■□□□□ 0.44
HLA-C-202ENST00000376237 TCTEX1D4Q5JR98 221 aa17.77■□□□□ 0.44
HLA-C-202ENST00000376237 WDR83OSQ9Y284 106 aa17.77■□□□□ 0.44
HLA-C-202ENST00000376237 S4R3C0 116 aa17.77■□□□□ 0.44
HLA-C-202ENST00000376237 UBE2L5PA0A1B0GUS4 154 aa17.77■□□□□ 0.43
HLA-C-202ENST00000376237 EIF5AP63241 154 aaKnown RBP17.77■□□□□ 0.43
HLA-C-202ENST00000376237 RAB31Q13636 194 aa17.77■□□□□ 0.43
HLA-C-202ENST00000376237 OPCMLQ14982 345 aa17.77■□□□□ 0.43
HLA-C-202ENST00000376237 THAP8Q8NA92 274 aa17.77■□□□□ 0.43
HLA-C-202ENST00000376237 UBAC2Q8NBM4 344 aa17.77■□□□□ 0.43
HLA-C-202ENST00000376237 SCGB1C1Q8TD33 95 aa17.77■□□□□ 0.43
HLA-C-202ENST00000376237 WDR61Q9GZS3 305 aaKnown RBP17.77■□□□□ 0.43
HLA-C-202ENST00000376237 CYTL1Q9NRR1 136 aa17.77■□□□□ 0.43
HLA-C-202ENST00000376237 LSM4Q9Y4Z0 139 aaKnown RBP17.77■□□□□ 0.43
HLA-C-202ENST00000376237 CCDC140Q96MF4 163 aa17.76■□□□□ 0.43
HLA-C-202ENST00000376237 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.75■□□□□ 0.43
HLA-C-202ENST00000376237 TCRBV4S1A1TA0A5B7 111 aa17.75■□□□□ 0.43
HLA-C-202ENST00000376237 ZFP92A6NM28 416 aa17.75■□□□□ 0.43
HLA-C-202ENST00000376237 F8W735 103 aaPredicted RBP17.75■□□□□ 0.43
HLA-C-202ENST00000376237 IGHV3-11P01762 117 aa17.75■□□□□ 0.43
HLA-C-202ENST00000376237 IGHV3-23P01764 117 aa17.75■□□□□ 0.43
HLA-C-202ENST00000376237 CLEC3BP05452 202 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms