RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 C19orf24Q9BVV8 132 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 MRPL32Q9BYC8 188 aaKnown RBP6.94□□□□□ -1.3
PTPRK-206ENST00000368215 TMEM133Q9H2Q1 129 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 NAGKQ9UJ70 344 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 TLN1Q9Y490 2541 aaKnown RBP6.94□□□□□ -1.3
PTPRK-206ENST00000368215 TNCP24821 2201 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 IGF2RP11717 2491 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 IGHV3OR16-13A0A075B7E8 117 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 IGHV3-74A0A0B4J1X5 117 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 A8MWL6 223 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 IL4P05112 153 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 DDTP30046 118 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 CDKN1AP38936 164 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 KLRB1Q12918 225 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 GBGT1Q8N5D6 347 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 KIR3DL3Q8N743 410 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 KLHDC1Q8N7A1 406 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 IL36BQ9NZH7 164 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 FOXA2Q9Y261 457 aaPredicted RBP6.94□□□□□ -1.3
PTPRK-206ENST00000368215 FAM208BQ5VWN6 2430 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 C15orf65H3BRN8 121 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 CA1P00915 261 aaPredicted RBP6.94□□□□□ -1.3
PTPRK-206ENST00000368215 ORM1P02763 201 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 LCN2P80188 198 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 SCGB2A2Q13296 93 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 PRR31Q5SQ13 230 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 FAM162BQ5T6X4 162 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 LINC01551Q86U37 167 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 BPIFA4PQ86YQ2 179 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 AGMATQ9BSE5 352 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 DMRT1Q9Y5R6 373 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 ARFGEF3Q5TH69 2177 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 ISLRO14498 428 aa6.93□□□□□ -1.3
PTPRK-206ENST00000368215 C5orf17Q8NAS9 161 aa6.93□□□□□ -1.3
PTPRK-206ENST00000368215 OR4A5Q8NH83 315 aa6.93□□□□□ -1.3
PTPRK-206ENST00000368215 CACNG8Q8WXS5 425 aa6.93□□□□□ -1.3
PTPRK-206ENST00000368215 DPM3Q9P2X0 92 aa6.93□□□□□ -1.3
PTPRK-206ENST00000368215 TRBV24-1A0A075B6N3 115 aa6.93□□□□□ -1.3
PTPRK-206ENST00000368215 FAM90A9PA6NNJ1 464 aa6.93□□□□□ -1.3
PTPRK-206ENST00000368215 ATP5IP56385 69 aaPredicted RBP6.93□□□□□ -1.3
PTPRK-206ENST00000368215 CACNA1AO00555 2505 aa6.93□□□□□ -1.3
PTPRK-206ENST00000368215 PTPRQQ9UMZ3 2332 aa6.93□□□□□ -1.3
PTPRK-206ENST00000368215 GCGP01275 180 aa6.93□□□□□ -1.3
PTPRK-206ENST00000368215 HLA-DQA1P01909 254 aa6.93□□□□□ -1.3
PTPRK-206ENST00000368215 MT-ND6P03923 174 aa6.93□□□□□ -1.3
PTPRK-206ENST00000368215 FOXA3P55318 350 aaPredicted RBP6.93□□□□□ -1.3
PTPRK-206ENST00000368215 TEX38Q6PEX7 206 aa6.93□□□□□ -1.3
PTPRK-206ENST00000368215 UNQ5815/PRO19632Q6UWF5 114 aa6.93□□□□□ -1.3
PTPRK-206ENST00000368215 Q6ZN92 141 aa6.93□□□□□ -1.3
PTPRK-206ENST00000368215 DKK4Q9UBT3 224 aa6.93□□□□□ -1.3
PTPRK-206ENST00000368215 CEP295Q9C0D2 2601 aa6.93□□□□□ -1.3
PTPRK-206ENST00000368215 TRANK1O15050 2925 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 CGB1A6NKQ9 187 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 PEX7O00628 323 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 BET1LQ9NYM9 111 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 YTHDF2Q9Y5A9 579 aaKnown RBP6.92□□□□□ -1.3
PTPRK-206ENST00000368215 OR2J3O76001 311 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 WNT2P09544 360 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 S100A4P26447 101 aaKnown RBP6.92□□□□□ -1.3
PTPRK-206ENST00000368215 C17orf58Q2M2W7 97 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 HIST3H2BBQ8N257 126 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 SRSF12Q8WXF0 261 aaKnown RBP6.92□□□□□ -1.3
PTPRK-206ENST00000368215 VKORC1Q9BQB6 163 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 WNT10AQ9GZT5 417 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 GSX1Q9H4S2 264 aaPredicted RBP6.92□□□□□ -1.3
PTPRK-206ENST00000368215 CBLN4Q9NTU7 201 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 M0R143 59 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 AMY1AP04745 511 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 PAFAH1B2P68402 229 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 LY6DQ14210 128 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 SLC25A48Q6ZT89 311 aaKnown RBP6.92□□□□□ -1.3
PTPRK-206ENST00000368215 PPP1R27Q86WC6 154 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 ATOH7Q8N100 152 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 FAM169BQ8N8A8 192 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 HIST1H2BLQ99880 126 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 RNF24Q9Y225 148 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 TRIOO75962 3097 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 H0YJW9 148 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 IGHV1-8P0DP01 117 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 ADMP35318 185 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 GPX4P36969 197 aaPredicted RBP6.92□□□□□ -1.3
PTPRK-206ENST00000368215 PLA2G5P39877 138 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 LYPD6BQ8NI32 183 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 RNASEH2CQ8TDP1 164 aaKnown RBP6.92□□□□□ -1.3
PTPRK-206ENST00000368215 TMEM170AQ8WVE7 144 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 NEU1Q99519 415 aa6.92□□□□□ -1.3
PTPRK-206ENST00000368215 ACACBO00763 2458 aa6.91□□□□□ -1.3
PTPRK-206ENST00000368215 IGHV3-49A0A0A0MS15 119 aa6.91□□□□□ -1.3
PTPRK-206ENST00000368215 MFAP4P55083 255 aa6.91□□□□□ -1.3
PTPRK-206ENST00000368215 TCTAP57738 103 aa6.91□□□□□ -1.3
PTPRK-206ENST00000368215 TMEM242Q9NWH2 141 aa6.91□□□□□ -1.3
PTPRK-206ENST00000368215 ATRXP46100 2492 aa6.91□□□□□ -1.3
PTPRK-206ENST00000368215 LOC389332A0A1B0GUA5 103 aa6.91□□□□□ -1.3
PTPRK-206ENST00000368215 E7EQL1 145 aa6.91□□□□□ -1.3
PTPRK-206ENST00000368215 TIMM23O14925 209 aa6.91□□□□□ -1.3
PTPRK-206ENST00000368215 ZNF672Q499Z4 452 aaPredicted RBP6.91□□□□□ -1.3
PTPRK-206ENST00000368215 PYY3Q5JQD4 70 aa6.91□□□□□ -1.3
PTPRK-206ENST00000368215 GOSR1O95249 250 aa6.91□□□□□ -1.3
PTPRK-206ENST00000368215 RIGQ13278 110 aa6.91□□□□□ -1.3
PTPRK-206ENST00000368215 NUP37Q8NFH4 326 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms