RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 CD177Q8N6Q3 437 aa6.06□□□□□ -1.44
VPS13A-202ENST00000357409 SEC11BP0C7V7 166 aa6.06□□□□□ -1.44
VPS13A-202ENST00000357409 LINC00596Q86U02 117 aa6.06□□□□□ -1.44
VPS13A-202ENST00000357409 MRPL16Q9NX20 251 aaKnown RBP6.06□□□□□ -1.44
VPS13A-202ENST00000357409 PSG8Q9UQ74 426 aa6.06□□□□□ -1.44
VPS13A-202ENST00000357409 OVOL3O00110 214 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 SSBP1Q04837 148 aaKnown RBP6.05□□□□□ -1.44
VPS13A-202ENST00000357409 ARTNQ5T4W7 220 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 H1FOOQ8IZA3 346 aaPredicted RBP6.05□□□□□ -1.44
VPS13A-202ENST00000357409 SPXQ9BT56 116 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 PLCH1Q4KWH8 1693 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 HMSDA8MTL9 139 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 K7EMI3 77 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 PAX4O43316 350 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 HOXA6P31267 233 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 FAM209AQ5JX71 171 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 ZNF600Q6ZNG1 722 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 OR10AG1Q8NH19 301 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 IL18BPO95998 194 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 SCN2AQ99250 2005 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 IGKV1-12A0A0C4DH73 117 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 LINC00862A6NCI5 91 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 FABP5P3A8MUU1 101 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 IGKV1D-12P01611 117 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 FAM90A1Q86YD7 464 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 TRIP11Q15643 1979 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 ANKRD36CQ5JPF3 1778 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 WISP1O95388 367 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 IFT22Q9H7X7 185 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 TIAM2Q8IVF5 1701 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 PROP1O75360 226 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 PSG1P11464 419 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 WT1P19544 449 aaPredicted RBP6.05□□□□□ -1.44
VPS13A-202ENST00000357409 CCL20P78556 96 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 APRG1Q8IVJ8 170 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 ST20Q9HBF5 79 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 UCP1P25874 307 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 SDF2L1Q9HCN8 221 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 TMEM127O75204 238 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 C6orf226Q5I0X4 101 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 UQCC3Q6UW78 93 aa6.05□□□□□ -1.44
VPS13A-202ENST00000357409 PAX2Q02962 417 aa6.04□□□□□ -1.44
VPS13A-202ENST00000357409 ZFP36L1Q07352 338 aaKnown RBP6.04□□□□□ -1.44
VPS13A-202ENST00000357409 CHRNA10Q9GZZ6 450 aa6.04□□□□□ -1.44
VPS13A-202ENST00000357409 IQCF6A8MYZ5 107 aa6.04□□□□□ -1.44
VPS13A-202ENST00000357409 HLA-DMBP28068 263 aa6.04□□□□□ -1.44
VPS13A-202ENST00000357409 IGF2BP2-AS1Q96M15 143 aa6.04□□□□□ -1.44
VPS13A-202ENST00000357409 RTBDNQ9BSG5 229 aaPredicted RBP6.04□□□□□ -1.44
VPS13A-202ENST00000357409 IGKV1OR2-108A0A075B7D4 117 aa6.04□□□□□ -1.44
VPS13A-202ENST00000357409 SRRM4A7MD48 611 aaKnown RBP6.04□□□□□ -1.44
VPS13A-202ENST00000357409 CA11O75493 328 aa6.04□□□□□ -1.44
VPS13A-202ENST00000357409 DDX60Q8IY21 1712 aaKnown RBP6.04□□□□□ -1.44
VPS13A-202ENST00000357409 MTURNQ8N3F0 131 aa6.04□□□□□ -1.44
VPS13A-202ENST00000357409 IGKV1-9A0A0C4DH69 117 aa6.04□□□□□ -1.44
VPS13A-202ENST00000357409 NEGR1Q7Z3B1 354 aa6.04□□□□□ -1.44
VPS13A-202ENST00000357409 NABP1Q96AH0 204 aa6.04□□□□□ -1.44
VPS13A-202ENST00000357409 TMEM45BQ96B21 275 aa6.04□□□□□ -1.44
VPS13A-202ENST00000357409 IGHV1-3A0A0C4DH29 117 aa6.04□□□□□ -1.44
VPS13A-202ENST00000357409 UPK2O00526 184 aa6.04□□□□□ -1.44
VPS13A-202ENST00000357409 SMIM13P0DJ93 91 aa6.04□□□□□ -1.44
VPS13A-202ENST00000357409 NPCDR1Q9BY65 106 aa6.04□□□□□ -1.44
VPS13A-202ENST00000357409 UBE2E1P51965 193 aa6.04□□□□□ -1.44
VPS13A-202ENST00000357409 LYRM2Q9NU23 88 aaPredicted RBP6.04□□□□□ -1.44
VPS13A-202ENST00000357409 TDRD6O60522 2096 aaKnown RBP6.04□□□□□ -1.44
VPS13A-202ENST00000357409 TMEM14DPA8MWL7 114 aa6.04□□□□□ -1.44
VPS13A-202ENST00000357409 VWC2LB2RUY7 222 aa6.04□□□□□ -1.44
VPS13A-202ENST00000357409 GAGE6Q13070 117 aa6.04□□□□□ -1.44
VPS13A-202ENST00000357409 MS4A6AQ9H2W1 248 aa6.04□□□□□ -1.44
VPS13A-202ENST00000357409 TRBV5-5A0A0J9YX44 114 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 C19orf67A6NJJ6 358 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 PRTN3P24158 256 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 EFNA4P52798 201 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 TMEM155Q4W5P6 130 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 NRAPQ86VF7 1730 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 HOXA5P20719 270 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 MEF2BQ02080 365 aaPredicted RBP6.03□□□□□ -1.44
VPS13A-202ENST00000357409 NHP2Q9NX24 153 aaKnown RBP6.03□□□□□ -1.44
VPS13A-202ENST00000357409 SCN1AP35498 2009 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 GSN-AS1Q9NRJ2 163 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 TRAV25A0A0B4J276 109 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 A0A1B0GWB2 263 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 FOLR2P14207 255 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 C14orf178Q8N769 122 aaPredicted RBP6.03□□□□□ -1.44
VPS13A-202ENST00000357409 IGKV1-39P01597 117 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 IGKV1D-39P04432 117 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 VAX1Q5SQQ9 334 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 RNF125Q96EQ8 232 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 A0A1B0GV90 55 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 F6UB75 175 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 TMEM178BH3BS89 294 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 Q6ZQT7 251 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 OCC1Q8TAD7 63 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 TRAV8-2A0A0B4J237 113 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 TMEM238LA0A1B0GVL6 79 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 RBMY1BA6NDE4 496 aaKnown RBP6.03□□□□□ -1.44
VPS13A-202ENST00000357409 RBMY1EA6NEQ0 496 aaKnown RBP6.03□□□□□ -1.44
VPS13A-202ENST00000357409 A6NJY4 79 aa6.03□□□□□ -1.44
VPS13A-202ENST00000357409 RBMY1DP0C7P1 496 aaKnown RBP6.03□□□□□ -1.44
VPS13A-202ENST00000357409 RBMY1A1P0DJD3 496 aaKnown RBP6.03□□□□□ -1.44
VPS13A-202ENST00000357409 RBMY1CP0DJD4 496 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms