RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 NPVFQ9HCQ7 196 aa12.76□□□□□ -0.37
SNED1-202ENST00000342631 BORCS7-ASMTA0A0B4J1R7 106 aa12.75□□□□□ -0.37
SNED1-202ENST00000342631 JTBO76095 146 aa12.75□□□□□ -0.37
SNED1-202ENST00000342631 RAB9AP51151 201 aa12.75□□□□□ -0.37
SNED1-202ENST00000342631 CLINT1Q14677 625 aa12.75□□□□□ -0.37
SNED1-202ENST00000342631 ZNF329Q86UD4 541 aa12.75□□□□□ -0.37
SNED1-202ENST00000342631 TXN2Q99757 166 aa12.75□□□□□ -0.37
SNED1-202ENST00000342631 PARD6GQ9BYG4 376 aaPredicted RBP12.75□□□□□ -0.37
SNED1-202ENST00000342631 SMIM3Q9BZL3 60 aa12.75□□□□□ -0.37
SNED1-202ENST00000342631 NF1P21359 2839 aa12.75□□□□□ -0.37
SNED1-202ENST00000342631 NIPBLQ6KC79 2804 aaeCLIP12.75□□□□□ -0.37
SNED1-202ENST00000342631 CLPSL1A2RUU4 121 aa12.74□□□□□ -0.37
SNED1-202ENST00000342631 NDUFB8O95169 186 aa12.74□□□□□ -0.37
SNED1-202ENST00000342631 IFNA5P01569 189 aa12.74□□□□□ -0.37
SNED1-202ENST00000342631 FCGR2BP31994 310 aaPredicted RBP12.74□□□□□ -0.37
SNED1-202ENST00000342631 TPPP2P59282 170 aa12.74□□□□□ -0.37
SNED1-202ENST00000342631 EIF5AP63241 154 aaKnown RBP12.74□□□□□ -0.37
SNED1-202ENST00000342631 ATP5G2Q06055 141 aa12.74□□□□□ -0.37
SNED1-202ENST00000342631 GAMTQ14353 236 aa12.74□□□□□ -0.37
SNED1-202ENST00000342631 C15orf32Q32M92 178 aa12.74□□□□□ -0.37
SNED1-202ENST00000342631 FAM209BQ5JX69 171 aa12.74□□□□□ -0.37
SNED1-202ENST00000342631 KLHDC1Q8N7A1 406 aa12.74□□□□□ -0.37
SNED1-202ENST00000342631 OR4X1Q8NH49 305 aa12.74□□□□□ -0.37
SNED1-202ENST00000342631 SCARB1Q8WTV0 552 aa12.74□□□□□ -0.37
SNED1-202ENST00000342631 MS4A10Q96PG2 267 aa12.74□□□□□ -0.37
SNED1-202ENST00000342631 GAR1Q9NY12 217 aaKnown RBP12.74□□□□□ -0.37
SNED1-202ENST00000342631 CUBNO60494 3623 aa12.74□□□□□ -0.37
SNED1-202ENST00000342631 TRBV7-1A0A0A6YYK4 115 aa12.74□□□□□ -0.37
SNED1-202ENST00000342631 OPCMLQ14982 345 aa12.74□□□□□ -0.37
SNED1-202ENST00000342631 TMEM144Q7Z5S9 345 aa12.74□□□□□ -0.37
SNED1-202ENST00000342631 UBAC2Q8NBM4 344 aa12.74□□□□□ -0.37
SNED1-202ENST00000342631 WIPF2Q8TF74 440 aaPredicted RBP12.74□□□□□ -0.37
SNED1-202ENST00000342631 C21orf62Q9NYP8 219 aa12.74□□□□□ -0.37
SNED1-202ENST00000342631 MPDU1O75352 247 aa12.73□□□□□ -0.37
SNED1-202ENST00000342631 NPBWR1P48145 328 aa12.73□□□□□ -0.37
SNED1-202ENST00000342631 MFAP4P55083 255 aa12.73□□□□□ -0.37
SNED1-202ENST00000342631 AKR1C1Q04828 323 aa12.73□□□□□ -0.37
SNED1-202ENST00000342631 OR5AU1Q8NGC0 362 aa12.73□□□□□ -0.37
SNED1-202ENST00000342631 OR4X2Q8NGF9 303 aa12.73□□□□□ -0.37
SNED1-202ENST00000342631 MYOZ3Q8TDC0 251 aa12.73□□□□□ -0.37
SNED1-202ENST00000342631 EEF1AKMT3Q96AZ1 226 aa12.73□□□□□ -0.37
SNED1-202ENST00000342631 WFDC1Q9HC57 220 aa12.73□□□□□ -0.37
SNED1-202ENST00000342631 RNF114Q9Y508 228 aa12.73□□□□□ -0.37
SNED1-202ENST00000342631 SMCO3A2RU48 225 aa12.72□□□□□ -0.37
SNED1-202ENST00000342631 SCGB2A1O75556 95 aa12.72□□□□□ -0.37
SNED1-202ENST00000342631 MDKP21741 143 aaPredicted RBP12.72□□□□□ -0.37
SNED1-202ENST00000342631 MLANAQ16655 118 aa12.72□□□□□ -0.37
SNED1-202ENST00000342631 ACSM6Q6P461 480 aa12.72□□□□□ -0.37
SNED1-202ENST00000342631 TEPPQ6URK8 271 aa12.72□□□□□ -0.37
SNED1-202ENST00000342631 TREML4Q6UXN2 200 aa12.72□□□□□ -0.37
SNED1-202ENST00000342631 SLC51BQ86UW2 128 aa12.72□□□□□ -0.37
SNED1-202ENST00000342631 WFDC12Q8WWY7 111 aa12.72□□□□□ -0.37
SNED1-202ENST00000342631 KLK15Q9H2R5 256 aa12.72□□□□□ -0.37
SNED1-202ENST00000342631 CYTL1Q9NRR1 136 aa12.72□□□□□ -0.37
SNED1-202ENST00000342631 WDR83OSQ9Y284 106 aa12.72□□□□□ -0.37
SNED1-202ENST00000342631 TRAV30A0A087WSZ9 112 aa12.72□□□□□ -0.37
SNED1-202ENST00000342631 RND2P52198 227 aa12.72□□□□□ -0.37
SNED1-202ENST00000342631 FOXL1Q12952 345 aa12.72□□□□□ -0.37
SNED1-202ENST00000342631 RAB31Q13636 194 aa12.72□□□□□ -0.37
SNED1-202ENST00000342631 SCGB1C1Q8TD33 95 aa12.72□□□□□ -0.37
SNED1-202ENST00000342631 TAF15Q92804 592 aaKnown RBP eCLIP12.72□□□□□ -0.37
SNED1-202ENST00000342631 ACY3Q96HD9 319 aa12.72□□□□□ -0.37
SNED1-202ENST00000342631 ZNF471Q9BX82 626 aaPredicted RBP12.72□□□□□ -0.37
SNED1-202ENST00000342631 LSM4Q9Y4Z0 139 aaKnown RBP12.72□□□□□ -0.37
SNED1-202ENST00000342631 C2CD3Q4AC94 2353 aa12.72□□□□□ -0.37
SNED1-202ENST00000342631 UBE2L5PA0A1B0GUS4 154 aa12.71□□□□□ -0.37
SNED1-202ENST00000342631 MFSD2BA6NFX1 497 aa12.71□□□□□ -0.37
SNED1-202ENST00000342631 CLN5O75503 358 aa12.71□□□□□ -0.37
SNED1-202ENST00000342631 PROK1P58294 105 aa12.71□□□□□ -0.37
SNED1-202ENST00000342631 RPL7L1Q6DKI1 246 aaKnown RBP12.71□□□□□ -0.37
SNED1-202ENST00000342631 THAP8Q8NA92 274 aa12.71□□□□□ -0.37
SNED1-202ENST00000342631 STOML3Q8TAV4 291 aa12.71□□□□□ -0.37
SNED1-202ENST00000342631 ZNF502Q8TBZ5 544 aa12.71□□□□□ -0.37
SNED1-202ENST00000342631 NPIPB3Q92617 1050 aa12.71□□□□□ -0.37
SNED1-202ENST00000342631 UBE2E2Q96LR5 201 aa12.71□□□□□ -0.37
SNED1-202ENST00000342631 WDR61Q9GZS3 305 aaKnown RBP12.71□□□□□ -0.37
SNED1-202ENST00000342631 C10orf99Q6UWK7 81 aa12.7□□□□□ -0.38
SNED1-202ENST00000342631 IGHV3-21A0A0B4J1V1 117 aa12.7□□□□□ -0.38
SNED1-202ENST00000342631 TPT1P13693 172 aaKnown RBP12.7□□□□□ -0.38
SNED1-202ENST00000342631 SRSF2Q01130 221 aaKnown RBP12.7□□□□□ -0.38
SNED1-202ENST00000342631 KIAA0141Q14154 515 aaPredicted RBP12.7□□□□□ -0.38
SNED1-202ENST00000342631 BTNL8Q6UX41 500 aa12.7□□□□□ -0.38
SNED1-202ENST00000342631 ZNF491Q8N8L2 437 aa12.7□□□□□ -0.38
SNED1-202ENST00000342631 ARV1Q9H2C2 271 aa12.7□□□□□ -0.38
SNED1-202ENST00000342631 GNG7O60262 68 aa12.69□□□□□ -0.38
SNED1-202ENST00000342631 IGHV3-48P01763 117 aa12.69□□□□□ -0.38
SNED1-202ENST00000342631 RPLP1P05386 114 aaKnown RBP12.69□□□□□ -0.38
SNED1-202ENST00000342631 FGF7P21781 194 aa12.69□□□□□ -0.38
SNED1-202ENST00000342631 ZNF343Q6P1L6 599 aa12.69□□□□□ -0.38
SNED1-202ENST00000342631 GNPNAT1Q96EK6 184 aaPredicted RBP12.69□□□□□ -0.38
SNED1-202ENST00000342631 TRGV9Q99603 122 aa12.69□□□□□ -0.38
SNED1-202ENST00000342631 MRPL36Q9P0J6 103 aaKnown RBP12.69□□□□□ -0.38
SNED1-202ENST00000342631 BOLA1Q9Y3E2 137 aa12.69□□□□□ -0.38
SNED1-202ENST00000342631 JMJD1CQ15652 2540 aa12.69□□□□□ -0.38
SNED1-202ENST00000342631 FABP1P07148 127 aa12.68□□□□□ -0.38
SNED1-202ENST00000342631 Q56UQ5 140 aa12.68□□□□□ -0.38
SNED1-202ENST00000342631 SPSB3Q6PJ21 355 aa12.68□□□□□ -0.38
SNED1-202ENST00000342631 BAP18Q8IXM2 172 aa12.68□□□□□ -0.38
SNED1-202ENST00000342631 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.68□□□□□ -0.38
SNED1-202ENST00000342631 GINS3Q9BRX5 216 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms