RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 DCAF16Q9NXF7 216 aa8.67□□□□□ -1.02
CAPRIN1-201ENST00000341394 IGKV1-6A0A0C4DH72 117 aa8.66□□□□□ -1.02
CAPRIN1-201ENST00000341394 A0A0G2JNJ9 132 aa8.66□□□□□ -1.02
CAPRIN1-201ENST00000341394 IGHV3-23P01764 117 aa8.66□□□□□ -1.02
CAPRIN1-201ENST00000341394 MZT1Q08AG7 82 aa8.66□□□□□ -1.02
CAPRIN1-201ENST00000341394 TDRG1Q3Y452 100 aa8.66□□□□□ -1.02
CAPRIN1-201ENST00000341394 FAM90A2PQ658T7 463 aa8.66□□□□□ -1.02
CAPRIN1-201ENST00000341394 TNFRSF19Q9NS68 423 aa8.66□□□□□ -1.02
CAPRIN1-201ENST00000341394 Q9UFV3 132 aa8.66□□□□□ -1.02
CAPRIN1-201ENST00000341394 IL6RP08887 468 aaPredicted RBP8.66□□□□□ -1.02
CAPRIN1-201ENST00000341394 CECR9P0C854 216 aa8.66□□□□□ -1.02
CAPRIN1-201ENST00000341394 RIPPLY3P57055 190 aa8.66□□□□□ -1.02
CAPRIN1-201ENST00000341394 PAFAH1B2P68402 229 aa8.66□□□□□ -1.02
CAPRIN1-201ENST00000341394 TMEM177Q53S58 311 aa8.66□□□□□ -1.02
CAPRIN1-201ENST00000341394 ZNF645Q8N7E2 425 aa8.66□□□□□ -1.02
CAPRIN1-201ENST00000341394 OR10W1Q8NGF6 305 aa8.66□□□□□ -1.02
CAPRIN1-201ENST00000341394 REPIN1Q9BWE0 567 aaKnown RBP8.66□□□□□ -1.02
CAPRIN1-201ENST00000341394 AMMECR1Q9Y4X0 333 aaPredicted RBP8.66□□□□□ -1.02
CAPRIN1-201ENST00000341394 SH2D7A6NKC9 451 aaPredicted RBP8.66□□□□□ -1.02
CAPRIN1-201ENST00000341394 DLX1P56177 255 aa8.66□□□□□ -1.02
CAPRIN1-201ENST00000341394 C5orf17Q8NAS9 161 aa8.66□□□□□ -1.02
CAPRIN1-201ENST00000341394 C1orf162Q8NEQ5 155 aaPredicted RBP8.66□□□□□ -1.02
CAPRIN1-201ENST00000341394 OR5P3Q8WZ94 311 aa8.66□□□□□ -1.02
CAPRIN1-201ENST00000341394 PPP1R14DQ9NXH3 145 aa8.66□□□□□ -1.02
CAPRIN1-201ENST00000341394 CEACAM18A8MTB9 384 aa8.65□□□□□ -1.02
CAPRIN1-201ENST00000341394 LEPROTL1O95214 131 aa8.65□□□□□ -1.02
CAPRIN1-201ENST00000341394 COL8A2P25067 703 aa8.65□□□□□ -1.02
CAPRIN1-201ENST00000341394 MAS1LP35410 378 aa8.65□□□□□ -1.02
CAPRIN1-201ENST00000341394 FAM216BQ8N7L0 139 aa8.65□□□□□ -1.02
CAPRIN1-201ENST00000341394 OR9G1Q8NH87 305 aa8.65□□□□□ -1.02
CAPRIN1-201ENST00000341394 TMEM56Q96MV1 263 aa8.65□□□□□ -1.02
CAPRIN1-201ENST00000341394 TMEM106BQ9NUM4 274 aa8.65□□□□□ -1.02
CAPRIN1-201ENST00000341394 IGKV1D-33P01593 117 aa8.65□□□□□ -1.02
CAPRIN1-201ENST00000341394 IGKV1-33P01594 117 aa8.65□□□□□ -1.02
CAPRIN1-201ENST00000341394 OR9G9P0C7N8 305 aa8.65□□□□□ -1.02
CAPRIN1-201ENST00000341394 ZNF114Q8NC26 417 aa8.65□□□□□ -1.02
CAPRIN1-201ENST00000341394 DIRC2Q96SL1 478 aa8.65□□□□□ -1.02
CAPRIN1-201ENST00000341394 UQCR10Q9UDW1 63 aa8.65□□□□□ -1.02
CAPRIN1-201ENST00000341394 ZNF785A8K8V0 405 aa8.65□□□□□ -1.02
CAPRIN1-201ENST00000341394 F2Z2F3 143 aa8.65□□□□□ -1.02
CAPRIN1-201ENST00000341394 PPIAL4DF5H284 164 aa8.65□□□□□ -1.02
CAPRIN1-201ENST00000341394 TGFAP01135 160 aa8.65□□□□□ -1.02
CAPRIN1-201ENST00000341394 CSN1S1P47710 185 aa8.65□□□□□ -1.02
CAPRIN1-201ENST00000341394 P2RX4Q99571 388 aa8.65□□□□□ -1.02
CAPRIN1-201ENST00000341394 IGHV3-66A0A0C4DH42 116 aa8.65□□□□□ -1.03
CAPRIN1-201ENST00000341394 K7EQM0 130 aa8.65□□□□□ -1.03
CAPRIN1-201ENST00000341394 GCSHP23434 173 aa8.65□□□□□ -1.03
CAPRIN1-201ENST00000341394 SRP14P37108 136 aaKnown RBP8.65□□□□□ -1.03
CAPRIN1-201ENST00000341394 TDGF1P3P51864 188 aa8.65□□□□□ -1.03
CAPRIN1-201ENST00000341394 WDR73Q6P4I2 378 aa8.65□□□□□ -1.03
CAPRIN1-201ENST00000341394 WDR31Q8NA23 367 aa8.65□□□□□ -1.03
CAPRIN1-201ENST00000341394 SRSF12Q8WXF0 261 aaKnown RBP8.65□□□□□ -1.03
CAPRIN1-201ENST00000341394 RAB9BQ9NP90 201 aa8.65□□□□□ -1.03
CAPRIN1-201ENST00000341394 TMEM56-RWDD3S4R434 201 aa8.65□□□□□ -1.03
CAPRIN1-201ENST00000341394 H7C2G1 150 aa8.64□□□□□ -1.03
CAPRIN1-201ENST00000341394 CEACAM8P31997 349 aaPredicted RBP8.64□□□□□ -1.03
CAPRIN1-201ENST00000341394 TIMM23BQ5SRD1 257 aa8.64□□□□□ -1.03
CAPRIN1-201ENST00000341394 LDLRAD2Q5SZI1 272 aa8.64□□□□□ -1.03
CAPRIN1-201ENST00000341394 ZNF324BQ6AW86 544 aaPredicted RBP8.64□□□□□ -1.03
CAPRIN1-201ENST00000341394 TMEM191AQ9H0A3 160 aa8.64□□□□□ -1.03
CAPRIN1-201ENST00000341394 TMEM167BQ9NRX6 74 aa8.64□□□□□ -1.03
CAPRIN1-201ENST00000341394 CSMD2Q7Z408 3487 aa8.64□□□□□ -1.03
CAPRIN1-201ENST00000341394 MAP1AP78559 2803 aaPredicted RBP8.64□□□□□ -1.03
CAPRIN1-201ENST00000341394 NDUFB3O43676 98 aa8.64□□□□□ -1.03
CAPRIN1-201ENST00000341394 KRTAP27-1Q3LI81 207 aa8.64□□□□□ -1.03
CAPRIN1-201ENST00000341394 GOLT1AQ6ZVE7 132 aa8.64□□□□□ -1.03
CAPRIN1-201ENST00000341394 ZC2HC1AQ96GY0 325 aa8.64□□□□□ -1.03
CAPRIN1-201ENST00000341394 TMEM208Q9BTX3 173 aa8.64□□□□□ -1.03
CAPRIN1-201ENST00000341394 NGBQ9NPG2 151 aa8.64□□□□□ -1.03
CAPRIN1-201ENST00000341394 NAV3Q8IVL0 2385 aa8.64□□□□□ -1.03
CAPRIN1-201ENST00000341394 TMEM250H0YL14 139 aa8.64□□□□□ -1.03
CAPRIN1-201ENST00000341394 M0QZK8 103 aa8.64□□□□□ -1.03
CAPRIN1-201ENST00000341394 GGCTO75223 188 aaKnown RBP8.64□□□□□ -1.03
CAPRIN1-201ENST00000341394 IGHV2-5P01817 119 aa8.64□□□□□ -1.03
CAPRIN1-201ENST00000341394 NUTF2P61970 127 aaKnown RBP8.64□□□□□ -1.03
CAPRIN1-201ENST00000341394 SSC4DQ8WTU2 575 aa8.64□□□□□ -1.03
CAPRIN1-201ENST00000341394 CHRDL1Q9BU40 450 aa8.64□□□□□ -1.03
CAPRIN1-201ENST00000341394 CSMD1Q96PZ7 3565 aa8.63□□□□□ -1.03
CAPRIN1-201ENST00000341394 UTP20O75691 2785 aaKnown RBP8.63□□□□□ -1.03
CAPRIN1-201ENST00000341394 FOLR2P14207 255 aa8.63□□□□□ -1.03
CAPRIN1-201ENST00000341394 GUSBP1Q15486 140 aa8.63□□□□□ -1.03
CAPRIN1-201ENST00000341394 ZNF726P1Q15940 193 aa8.63□□□□□ -1.03
CAPRIN1-201ENST00000341394 NMSQ5H8A3 153 aa8.63□□□□□ -1.03
CAPRIN1-201ENST00000341394 TMEM108Q6UXF1 575 aa8.63□□□□□ -1.03
CAPRIN1-201ENST00000341394 TMEM170AQ8WVE7 144 aa8.63□□□□□ -1.03
CAPRIN1-201ENST00000341394 RPEQ96AT9 228 aa8.63□□□□□ -1.03
CAPRIN1-201ENST00000341394 MAP1LC3CQ9BXW4 147 aa8.63□□□□□ -1.03
CAPRIN1-201ENST00000341394 EGLN1Q9GZT9 426 aa8.63□□□□□ -1.03
CAPRIN1-201ENST00000341394 IGSF10Q6WRI0 2623 aa8.63□□□□□ -1.03
CAPRIN1-201ENST00000341394 CRYBG3Q68DQ2 2970 aa8.63□□□□□ -1.03
CAPRIN1-201ENST00000341394 ZFYVE26Q68DK2 2539 aa8.63□□□□□ -1.03
CAPRIN1-201ENST00000341394 GAGE10A6NGK3 116 aa8.63□□□□□ -1.03
CAPRIN1-201ENST00000341394 CCL3L1P16619 93 aa8.63□□□□□ -1.03
CAPRIN1-201ENST00000341394 MAJINQ3KP22 176 aa8.63□□□□□ -1.03
CAPRIN1-201ENST00000341394 BPIFA4PQ86YQ2 179 aa8.63□□□□□ -1.03
CAPRIN1-201ENST00000341394 VKORC1Q9BQB6 163 aa8.63□□□□□ -1.03
CAPRIN1-201ENST00000341394 PRDM13Q9H4Q3 707 aa8.63□□□□□ -1.03
CAPRIN1-201ENST00000341394 CALYQ9NYX4 217 aa8.63□□□□□ -1.03
CAPRIN1-201ENST00000341394 LAMTOR2Q9Y2Q5 125 aa8.63□□□□□ -1.03
CAPRIN1-201ENST00000341394 USP9YO00507 2555 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms