RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 RPRMQ9NS64 109 aa11.56□□□□□ -0.56
CBX3-201ENST00000337620 PFDN2Q9UHV9 154 aa11.56□□□□□ -0.56
CBX3-201ENST00000337620 LINC00527Q9UJ94 153 aa11.56□□□□□ -0.56
CBX3-201ENST00000337620 SONP18583 2426 aaKnown RBP11.56□□□□□ -0.56
CBX3-201ENST00000337620 CYB5BO43169 146 aa11.56□□□□□ -0.56
CBX3-201ENST00000337620 MIC13Q5XKP0 118 aa11.56□□□□□ -0.56
CBX3-201ENST00000337620 COMMD7Q86VX2 200 aa11.56□□□□□ -0.56
CBX3-201ENST00000337620 SIGLECL1Q8N7X8 197 aa11.56□□□□□ -0.56
CBX3-201ENST00000337620 VPREB3Q9UKI3 123 aa11.56□□□□□ -0.56
CBX3-201ENST00000337620 I3L2K1 104 aa11.55□□□□□ -0.56
CBX3-201ENST00000337620 OR10J1P30954 320 aa11.55□□□□□ -0.56
CBX3-201ENST00000337620 RAB2AP61019 212 aa11.55□□□□□ -0.56
CBX3-201ENST00000337620 AKIRIN2Q53H80 203 aa11.55□□□□□ -0.56
CBX3-201ENST00000337620 TMEM41BQ5BJD5 291 aa11.55□□□□□ -0.56
CBX3-201ENST00000337620 SLC35E3Q7Z769 313 aa11.55□□□□□ -0.56
CBX3-201ENST00000337620 FANCD2OSQ96PS1 177 aa11.55□□□□□ -0.56
CBX3-201ENST00000337620 CITED4Q96RK1 184 aa11.55□□□□□ -0.56
CBX3-201ENST00000337620 PRDM13Q9H4Q3 707 aa11.55□□□□□ -0.56
CBX3-201ENST00000337620 ZNF355PQ9NSJ1 428 aa11.55□□□□□ -0.56
CBX3-201ENST00000337620 PXMP4Q9Y6I8 212 aa11.55□□□□□ -0.56
CBX3-201ENST00000337620 IGLV11-55A0A075B6I3 123 aa11.54□□□□□ -0.56
CBX3-201ENST00000337620 A0A1B0GV50 99 aa11.54□□□□□ -0.56
CBX3-201ENST00000337620 ZFP92A6NM28 416 aa11.54□□□□□ -0.56
CBX3-201ENST00000337620 HNF1AP20823 631 aa11.54□□□□□ -0.56
CBX3-201ENST00000337620 Q6ZS46 218 aa11.54□□□□□ -0.56
CBX3-201ENST00000337620 FAM110DQ8TAY7 271 aaPredicted RBP11.54□□□□□ -0.56
CBX3-201ENST00000337620 TMEM68Q96MH6 324 aa11.54□□□□□ -0.56
CBX3-201ENST00000337620 FLNBO75369 2602 aaKnown RBP11.54□□□□□ -0.56
CBX3-201ENST00000337620 K7EIM0 57 aa11.54□□□□□ -0.56
CBX3-201ENST00000337620 TSPAN15O95858 294 aa11.54□□□□□ -0.56
CBX3-201ENST00000337620 IGHG2P01859 326 aa11.54□□□□□ -0.56
CBX3-201ENST00000337620 MBP02144 154 aa11.54□□□□□ -0.56
CBX3-201ENST00000337620 OR10G4Q8NGN3 311 aa11.54□□□□□ -0.56
CBX3-201ENST00000337620 OR10G9Q8NGN4 311 aa11.54□□□□□ -0.56
CBX3-201ENST00000337620 OR10G7Q8NGN6 311 aa11.54□□□□□ -0.56
CBX3-201ENST00000337620 DUX5Q96PT3 197 aa11.54□□□□□ -0.56
CBX3-201ENST00000337620 THYN1Q9P016 225 aa11.54□□□□□ -0.56
CBX3-201ENST00000337620 ANK3Q12955 4377 aaKnown RBP11.54□□□□□ -0.56
CBX3-201ENST00000337620 TRAV41A0A0B4J266 112 aa11.53□□□□□ -0.56
CBX3-201ENST00000337620 OR2J3O76001 311 aa11.53□□□□□ -0.56
CBX3-201ENST00000337620 H2AFB1P0C5Y9 115 aa11.53□□□□□ -0.56
CBX3-201ENST00000337620 GATA2P23769 480 aaPredicted RBP11.53□□□□□ -0.56
CBX3-201ENST00000337620 B2MP61769 119 aa11.53□□□□□ -0.56
CBX3-201ENST00000337620 DEFA5Q01523 94 aa11.53□□□□□ -0.56
CBX3-201ENST00000337620 GCSAMLQ5JQS6 135 aa11.53□□□□□ -0.56
CBX3-201ENST00000337620 DPPA3Q6W0C5 159 aa11.53□□□□□ -0.56
CBX3-201ENST00000337620 STPG3Q8N7X2 389 aa11.53□□□□□ -0.56
CBX3-201ENST00000337620 TMEM116Q8NCL8 245 aa11.53□□□□□ -0.56
CBX3-201ENST00000337620 BPIFCQ8NFQ6 507 aa11.53□□□□□ -0.56
CBX3-201ENST00000337620 KCNIP2Q9NS61 270 aa11.53□□□□□ -0.56
CBX3-201ENST00000337620 SLC45A2Q9UMX9 530 aa11.53□□□□□ -0.56
CBX3-201ENST00000337620 S4R3C0 116 aa11.53□□□□□ -0.56
CBX3-201ENST00000337620 TSPAN9O75954 239 aa11.53□□□□□ -0.56
CBX3-201ENST00000337620 M6PRP20645 277 aa11.53□□□□□ -0.56
CBX3-201ENST00000337620 RPL29P47914 159 aaKnown RBP11.53□□□□□ -0.56
CBX3-201ENST00000337620 ACOT6Q3I5F7 207 aaPredicted RBP11.53□□□□□ -0.56
CBX3-201ENST00000337620 RBMS3Q6XE24 437 aaKnown RBP11.53□□□□□ -0.56
CBX3-201ENST00000337620 RPP25LQ8N5L8 163 aaKnown RBP11.53□□□□□ -0.56
CBX3-201ENST00000337620 SFT2D1Q8WV19 159 aa11.53□□□□□ -0.56
CBX3-201ENST00000337620 NOL4LQ96MY1 436 aaPredicted RBP11.53□□□□□ -0.56
CBX3-201ENST00000337620 EIF3GO75821 320 aaKnown RBP eCLIP11.52□□□□□ -0.57
CBX3-201ENST00000337620 YIF1AO95070 293 aa11.52□□□□□ -0.57
CBX3-201ENST00000337620 NDUFB8O95169 186 aa11.52□□□□□ -0.57
CBX3-201ENST00000337620 IGF1P05019 195 aa11.52□□□□□ -0.57
CBX3-201ENST00000337620 ZNF90Q03938 601 aa11.52□□□□□ -0.57
CBX3-201ENST00000337620 CYP2G1PQ6ZSU1 146 aa11.52□□□□□ -0.57
CBX3-201ENST00000337620 THAP8Q8NA92 274 aa11.52□□□□□ -0.57
CBX3-201ENST00000337620 GSX1Q9H4S2 264 aaPredicted RBP11.52□□□□□ -0.57
CBX3-201ENST00000337620 SLC39A9Q9NUM3 307 aa11.52□□□□□ -0.57
CBX3-201ENST00000337620 MED9Q9NWA0 146 aa11.52□□□□□ -0.57
CBX3-201ENST00000337620 FBXL7Q9UJT9 491 aa11.52□□□□□ -0.57
CBX3-201ENST00000337620 IGKV1D-37A0A075B6S9 117 aa11.51□□□□□ -0.57
CBX3-201ENST00000337620 HIST1H1BP16401 226 aaKnown RBP11.51□□□□□ -0.57
CBX3-201ENST00000337620 FAM122CQ6P4D5 195 aa11.51□□□□□ -0.57
CBX3-201ENST00000337620 RCC1LQ96I51 464 aaKnown RBP11.51□□□□□ -0.57
CBX3-201ENST00000337620 MS4A10Q96PG2 267 aa11.51□□□□□ -0.57
CBX3-201ENST00000337620 TCRBV4S1A1TA0A5B7 111 aa11.51□□□□□ -0.57
CBX3-201ENST00000337620 SOX15O60248 233 aa11.51□□□□□ -0.57
CBX3-201ENST00000337620 LY6G6DO95868 133 aa11.51□□□□□ -0.57
CBX3-201ENST00000337620 LINC00869P0C866 280 aa11.51□□□□□ -0.57
CBX3-201ENST00000337620 CRIP2P52943 208 aaPredicted RBP11.51□□□□□ -0.57
CBX3-201ENST00000337620 PRR20EP86478 221 aa11.51□□□□□ -0.57
CBX3-201ENST00000337620 PRR20CP86479 221 aa11.51□□□□□ -0.57
CBX3-201ENST00000337620 PRR20DP86480 221 aa11.51□□□□□ -0.57
CBX3-201ENST00000337620 PRR20BP86481 221 aa11.51□□□□□ -0.57
CBX3-201ENST00000337620 PRR20AP86496 221 aa11.51□□□□□ -0.57
CBX3-201ENST00000337620 ZNF726P1Q15940 193 aa11.51□□□□□ -0.57
CBX3-201ENST00000337620 LCN15Q6UWW0 184 aa11.51□□□□□ -0.57
CBX3-201ENST00000337620 SSX7Q7RTT5 188 aa11.51□□□□□ -0.57
CBX3-201ENST00000337620 OR4X1Q8NH49 305 aa11.51□□□□□ -0.57
CBX3-201ENST00000337620 MARC2Q969Z3 335 aa11.51□□□□□ -0.57
CBX3-201ENST00000337620 SLC25A22Q9H936 323 aa11.51□□□□□ -0.57
CBX3-201ENST00000337620 MFSD2BA6NFX1 497 aa11.5□□□□□ -0.57
CBX3-201ENST00000337620 AP4M1O00189 453 aa11.5□□□□□ -0.57
CBX3-201ENST00000337620 LYPD6BQ8NI32 183 aa11.5□□□□□ -0.57
CBX3-201ENST00000337620 ACTR3CQ9C0K3 210 aaPredicted RBP11.5□□□□□ -0.57
CBX3-201ENST00000337620 HMGB3O15347 200 aaKnown RBP11.5□□□□□ -0.57
CBX3-201ENST00000337620 IGHV3-23P01764 117 aa11.5□□□□□ -0.57
CBX3-201ENST00000337620 RHOGP84095 191 aa11.5□□□□□ -0.57
CBX3-201ENST00000337620 C19orf54Q5BKX5 351 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms