RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 FBXL7Q9UJT9 491 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 LINC00473A8K010 186 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 GCSHP23434 173 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 CA7P43166 264 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 STPG4Q8N801 248 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 TMEM116Q8NCL8 245 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 ZBTB34Q8NCN2 500 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 TMEM70Q9BUB7 260 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 MEGF9Q9H1U4 602 aa12.67□□□□□ -0.38
VARS2-201ENST00000321897 IGKV3D-15A0A087WSY6 115 aa12.66□□□□□ -0.38
VARS2-201ENST00000321897 FAM90A26D6RGX4 464 aa12.66□□□□□ -0.38
VARS2-201ENST00000321897 C1orf185Q5T7R7 199 aa12.66□□□□□ -0.38
VARS2-201ENST00000321897 PRR7Q8TB68 274 aa12.66□□□□□ -0.38
VARS2-201ENST00000321897 FAM222BQ8WU58 562 aa12.66□□□□□ -0.38
VARS2-201ENST00000321897 NPIPB3Q92617 1050 aa12.66□□□□□ -0.38
VARS2-201ENST00000321897 ABHD17AQ96GS6 310 aa12.66□□□□□ -0.38
VARS2-201ENST00000321897 FRYLO94915 3013 aa12.66□□□□□ -0.38
VARS2-201ENST00000321897 HIST1H1EP10412 219 aaKnown RBP12.66□□□□□ -0.38
VARS2-201ENST00000321897 WFDC3Q8IUB2 231 aa12.66□□□□□ -0.38
VARS2-201ENST00000321897 RNASEH2CQ8TDP1 164 aaKnown RBP12.66□□□□□ -0.38
VARS2-201ENST00000321897 AMMECR1Q9Y4X0 333 aaPredicted RBP12.66□□□□□ -0.38
VARS2-201ENST00000321897 RELQ04864 619 aaPredicted RBP12.66□□□□□ -0.38
VARS2-201ENST00000321897 C19orf35Q6ZS72 473 aa12.66□□□□□ -0.38
VARS2-201ENST00000321897 PAXXQ9BUH6 204 aa12.66□□□□□ -0.38
VARS2-201ENST00000321897 ETV2O00321 342 aaPredicted RBP12.65□□□□□ -0.38
VARS2-201ENST00000321897 C1orf174Q8IYL3 243 aa12.65□□□□□ -0.38
VARS2-201ENST00000321897 TIMD4Q96H15 378 aa12.65□□□□□ -0.38
VARS2-201ENST00000321897 FREM2Q5SZK8 3169 aa12.65□□□□□ -0.38
VARS2-201ENST00000321897 IGHV1-18A0A0C4DH31 117 aa12.65□□□□□ -0.38
VARS2-201ENST00000321897 PGPA6NDG6 321 aa12.65□□□□□ -0.38
VARS2-201ENST00000321897 ZNF207O43670 478 aaKnown RBP12.65□□□□□ -0.38
VARS2-201ENST00000321897 PSG1P11464 419 aa12.65□□□□□ -0.38
VARS2-201ENST00000321897 ARF6P62330 175 aa12.65□□□□□ -0.38
VARS2-201ENST00000321897 MLANAQ16655 118 aa12.65□□□□□ -0.38
VARS2-201ENST00000321897 PCSK4Q6UW60 755 aa12.65□□□□□ -0.38
VARS2-201ENST00000321897 TNFRSF19Q9NS68 423 aa12.65□□□□□ -0.38
VARS2-201ENST00000321897 PPP1R14DQ9NXH3 145 aa12.65□□□□□ -0.38
VARS2-201ENST00000321897 ZFYVE26Q68DK2 2539 aa12.65□□□□□ -0.38
VARS2-201ENST00000321897 IGHV3OR16-13A0A075B7E8 117 aa12.65□□□□□ -0.38
VARS2-201ENST00000321897 IGHV3-74A0A0B4J1X5 117 aa12.65□□□□□ -0.38
VARS2-201ENST00000321897 CSN1S1P47710 185 aa12.65□□□□□ -0.38
VARS2-201ENST00000321897 SLC35E4Q6ICL7 350 aa12.65□□□□□ -0.38
VARS2-201ENST00000321897 LYPD6Q86Y78 171 aa12.65□□□□□ -0.38
VARS2-201ENST00000321897 FGF23Q9GZV9 251 aaPredicted RBP12.65□□□□□ -0.38
VARS2-201ENST00000321897 TIMM9Q9Y5J7 89 aa12.65□□□□□ -0.38
VARS2-201ENST00000321897 K7EQM0 130 aa12.64□□□□□ -0.39
VARS2-201ENST00000321897 RBFOX2O43251 390 aaKnown RBP eCLIP12.64□□□□□ -0.392e-6■■■■□ 23.3
VARS2-201ENST00000321897 CD3EP07766 207 aa12.64□□□□□ -0.39
VARS2-201ENST00000321897 HSPE1P61604 102 aaKnown RBP12.64□□□□□ -0.39
VARS2-201ENST00000321897 TMEM177Q53S58 311 aa12.64□□□□□ -0.39
VARS2-201ENST00000321897 OR10W1Q8NGF6 305 aa12.64□□□□□ -0.39
VARS2-201ENST00000321897 ZNF714Q96N38 554 aa12.64□□□□□ -0.39
VARS2-201ENST00000321897 DUX4L9Q6RFH8 374 aaPredicted RBP12.64□□□□□ -0.39
VARS2-201ENST00000321897 WDR86Q86TI4 376 aa12.64□□□□□ -0.39
VARS2-201ENST00000321897 HSPB7Q9UBY9 170 aa12.64□□□□□ -0.39
VARS2-201ENST00000321897 hDV102S1A0JD36 115 aa12.64□□□□□ -0.39
VARS2-201ENST00000321897 A6NDN8 102 aa12.64□□□□□ -0.39
VARS2-201ENST00000321897 C10orf113Q5VZT2 155 aa12.64□□□□□ -0.39
VARS2-201ENST00000321897 PRNTQ86SH4 94 aa12.64□□□□□ -0.39
VARS2-201ENST00000321897 CORTO00230 105 aa12.63□□□□□ -0.39
VARS2-201ENST00000321897 CCL21O00585 134 aa12.63□□□□□ -0.39
VARS2-201ENST00000321897 MPDU1O75352 247 aa12.63□□□□□ -0.39
VARS2-201ENST00000321897 TPTE2P1Q5T6R2 138 aa12.63□□□□□ -0.39
VARS2-201ENST00000321897 TCF24Q7RTU0 167 aa12.63□□□□□ -0.39
VARS2-201ENST00000321897 OR1L8Q8NGR8 309 aa12.63□□□□□ -0.39
VARS2-201ENST00000321897 COQ2Q96H96 371 aa12.63□□□□□ -0.39
VARS2-201ENST00000321897 H3BUT2 72 aa12.63□□□□□ -0.39
VARS2-201ENST00000321897 PRNDQ9UKY0 176 aa12.63□□□□□ -0.39
VARS2-201ENST00000321897 COL6A3P12111 3177 aa12.63□□□□□ -0.39
VARS2-201ENST00000321897 IQCF6A8MYZ5 107 aa12.63□□□□□ -0.39
VARS2-201ENST00000321897 GNG7O60262 68 aa12.63□□□□□ -0.39
VARS2-201ENST00000321897 CLEC3BP05452 202 aa12.63□□□□□ -0.39
VARS2-201ENST00000321897 CEACAM8P31997 349 aaPredicted RBP12.63□□□□□ -0.39
VARS2-201ENST00000321897 SEPSECSQ9HD40 501 aaKnown RBP12.63□□□□□ -0.39
VARS2-201ENST00000321897 LY6HO94772 140 aa12.62□□□□□ -0.39
VARS2-201ENST00000321897 UBE2V1Q13404 147 aa12.62□□□□□ -0.39
VARS2-201ENST00000321897 ZNF585BQ52M93 769 aa12.62□□□□□ -0.39
VARS2-201ENST00000321897 CD177Q8N6Q3 437 aa12.62□□□□□ -0.39
VARS2-201ENST00000321897 SAA2-SAA4A0A096LPE2 208 aa12.62□□□□□ -0.39
VARS2-201ENST00000321897 FOXH1O75593 365 aa12.62□□□□□ -0.39
VARS2-201ENST00000321897 SAA2P0DJI9 122 aaPredicted RBP12.62□□□□□ -0.39
VARS2-201ENST00000321897 RNASE8Q8TDE3 154 aaKnown RBP12.62□□□□□ -0.39
VARS2-201ENST00000321897 NUDT11Q96G61 164 aa12.62□□□□□ -0.39
VARS2-201ENST00000321897 TXNDC17Q9BRA2 123 aa12.62□□□□□ -0.39
VARS2-201ENST00000321897 LSM4Q9Y4Z0 139 aaKnown RBP12.62□□□□□ -0.39
VARS2-201ENST00000321897 YTHDF2Q9Y5A9 579 aaKnown RBP12.62□□□□□ -0.39
VARS2-201ENST00000321897 TSPOP30536 169 aa12.62□□□□□ -0.39
VARS2-201ENST00000321897 BSPH1Q075Z2 132 aa12.62□□□□□ -0.39
VARS2-201ENST00000321897 Q6P435 159 aa12.62□□□□□ -0.39
VARS2-201ENST00000321897 ANAPC10Q9UM13 185 aa12.62□□□□□ -0.39
VARS2-201ENST00000321897 PTPRSQ13332 1948 aa12.61□□□□□ -0.39
VARS2-201ENST00000321897 SH2D7A6NKC9 451 aaPredicted RBP12.61□□□□□ -0.39
VARS2-201ENST00000321897 HYPMO75409 117 aa12.61□□□□□ -0.39
VARS2-201ENST00000321897 GPX1P07203 203 aa12.61□□□□□ -0.39
VARS2-201ENST00000321897 GLRXP35754 106 aa12.61□□□□□ -0.39
VARS2-201ENST00000321897 DNLZQ5SXM8 178 aa12.61□□□□□ -0.39
VARS2-201ENST00000321897 HSPB8Q9UJY1 196 aa12.61□□□□□ -0.39
VARS2-201ENST00000321897 TRAV9-2A0A087WT02 112 aa12.61□□□□□ -0.39
VARS2-201ENST00000321897 A0A087X0K7 114 aa12.61□□□□□ -0.39
VARS2-201ENST00000321897 IGKV1-39P01597 117 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms