RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 RHEBQ15382 184 aa12.5□□□□□ -0.41
CALR-201ENST00000316448 FAM90A2PQ658T7 463 aa12.5□□□□□ -0.41
CALR-201ENST00000316448 PVRIGQ6DKI7 326 aa12.5□□□□□ -0.41
CALR-201ENST00000316448 RBMS3Q6XE24 437 aaKnown RBP12.5□□□□□ -0.41
CALR-201ENST00000316448 ZNF114Q8NC26 417 aa12.5□□□□□ -0.41
CALR-201ENST00000316448 SSMEM1Q8WWF3 244 aa12.5□□□□□ -0.41
CALR-201ENST00000316448 MANBALQ9NQG1 85 aa12.5□□□□□ -0.41
CALR-201ENST00000316448 ZFHX3Q15911 3703 aa12.5□□□□□ -0.41
CALR-201ENST00000316448 NDUFS6O75380 124 aaKnown RBP12.49□□□□□ -0.41
CALR-201ENST00000316448 TMEM11P17152 192 aa12.49□□□□□ -0.41
CALR-201ENST00000316448 MEF2BQ02080 365 aaPredicted RBP12.49□□□□□ -0.41
CALR-201ENST00000316448 PLGLAQ15195 96 aa12.49□□□□□ -0.41
CALR-201ENST00000316448 C5orf64Q2M2E5 130 aa12.49□□□□□ -0.41
CALR-201ENST00000316448 SLC16A13Q7RTY0 426 aa12.49□□□□□ -0.41
CALR-201ENST00000316448 PIFOQ8TCI5 191 aa12.49□□□□□ -0.41
CALR-201ENST00000316448 TMPRSS5Q9H3S3 457 aa12.49□□□□□ -0.41
CALR-201ENST00000316448 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.49□□□□□ -0.419e-10■■■■□ 25.3
CALR-201ENST00000316448 TGFAP01135 160 aa12.49□□□□□ -0.41
CALR-201ENST00000316448 CD81P60033 236 aa12.49□□□□□ -0.41
CALR-201ENST00000316448 SRSF12Q8WXF0 261 aaKnown RBP12.49□□□□□ -0.41
CALR-201ENST00000316448 SLC45A2Q9UMX9 530 aa12.49□□□□□ -0.41
CALR-201ENST00000316448 C7orf77A4D0Y5 90 aa12.48□□□□□ -0.41
CALR-201ENST00000316448 NCBP2LA6PVI3 153 aaKnown RBP12.48□□□□□ -0.41
CALR-201ENST00000316448 H3BQ15 152 aa12.48□□□□□ -0.41
CALR-201ENST00000316448 ACTL6BO94805 426 aa12.48□□□□□ -0.41
CALR-201ENST00000316448 LINC00869P0C866 280 aa12.48□□□□□ -0.41
CALR-201ENST00000316448 SUB1P53999 127 aaKnown RBP eCLIP12.48□□□□□ -0.413e-41■□□□□ 9.2
CALR-201ENST00000316448 PRSS57Q6UWY2 283 aa12.48□□□□□ -0.41
CALR-201ENST00000316448 MRPL41Q8IXM3 137 aaKnown RBP12.48□□□□□ -0.41
CALR-201ENST00000316448 Q8N9W7 124 aa12.48□□□□□ -0.41
CALR-201ENST00000316448 ABCA1O95477 2261 aa12.48□□□□□ -0.41
CALR-201ENST00000316448 A0A1W2PPV4 95 aa12.47□□□□□ -0.41
CALR-201ENST00000316448 M0R036 132 aa12.47□□□□□ -0.41
CALR-201ENST00000316448 STAG3L2P0CL84 134 aa12.47□□□□□ -0.41
CALR-201ENST00000316448 STAG3L3P0CL85 134 aa12.47□□□□□ -0.41
CALR-201ENST00000316448 PSMB3P49720 205 aa12.47□□□□□ -0.41
CALR-201ENST00000316448 SLC35E3Q7Z769 313 aa12.47□□□□□ -0.41
CALR-201ENST00000316448 WFDC11Q8NEX6 87 aa12.47□□□□□ -0.41
CALR-201ENST00000316448 FAM103A1Q9BTL3 118 aaKnown RBP12.47□□□□□ -0.41
CALR-201ENST00000316448 C20orf24Q9BUV8 137 aa12.47□□□□□ -0.41
CALR-201ENST00000316448 FNDC4Q9H6D8 234 aaPredicted RBP12.47□□□□□ -0.41
CALR-201ENST00000316448 DMRT1Q9Y5R6 373 aa12.47□□□□□ -0.41
CALR-201ENST00000316448 PUS1Q9Y606 427 aaKnown RBP eCLIP12.47□□□□□ -0.41
CALR-201ENST00000316448 GCN1Q92616 2671 aaKnown RBP12.47□□□□□ -0.41
CALR-201ENST00000316448 PDZD2O15018 2839 aa12.47□□□□□ -0.41
CALR-201ENST00000316448 FAM106CPP0CH98 169 aa12.47□□□□□ -0.41
CALR-201ENST00000316448 CEBPGP53567 150 aa12.47□□□□□ -0.41
CALR-201ENST00000316448 NDPQ00604 133 aa12.47□□□□□ -0.41
CALR-201ENST00000316448 CIARTQ8N365 385 aaPredicted RBP12.47□□□□□ -0.41
CALR-201ENST00000316448 NIPSNAP3BQ9BS92 247 aa12.47□□□□□ -0.41
CALR-201ENST00000316448 MEGF9Q9H1U4 602 aa12.47□□□□□ -0.41
CALR-201ENST00000316448 RPS10P5Q9NQ39 176 aa12.47□□□□□ -0.41
CALR-201ENST00000316448 SMCO4Q9NRQ5 59 aa12.47□□□□□ -0.41
CALR-201ENST00000316448 GATA3P23771 443 aa12.46□□□□□ -0.42
CALR-201ENST00000316448 BRS3P32247 399 aa12.46□□□□□ -0.42
CALR-201ENST00000316448 AKR1C3P42330 323 aa12.46□□□□□ -0.42
CALR-201ENST00000316448 CX3CL1P78423 397 aa12.46□□□□□ -0.42
CALR-201ENST00000316448 FXYD3Q14802 87 aa12.46□□□□□ -0.42
CALR-201ENST00000316448 OR2T6Q8NHC8 308 aa12.46□□□□□ -0.42
CALR-201ENST00000316448 GATAD1Q8WUU5 269 aa12.46□□□□□ -0.42
CALR-201ENST00000316448 SLC35E1Q96K37 410 aa12.46□□□□□ -0.42
CALR-201ENST00000316448 MRPL36Q9P0J6 103 aaKnown RBP12.46□□□□□ -0.42
CALR-201ENST00000316448 TMEM250H0YL14 139 aa12.45□□□□□ -0.42
CALR-201ENST00000316448 CNIH1O95406 144 aa12.45□□□□□ -0.42
CALR-201ENST00000316448 IGHV3-48P01763 117 aa12.45□□□□□ -0.42
CALR-201ENST00000316448 ASPHD1Q5U4P2 390 aa12.45□□□□□ -0.42
CALR-201ENST00000316448 ABHD5Q8WTS1 349 aa12.45□□□□□ -0.42
CALR-201ENST00000316448 ZNF469Q96JG9 3925 aaPredicted RBP12.45□□□□□ -0.42
CALR-201ENST00000316448 SH2D7A6NKC9 451 aaPredicted RBP12.45□□□□□ -0.42
CALR-201ENST00000316448 ARL14EPLP0DKL9 152 aa12.45□□□□□ -0.42
CALR-201ENST00000316448 EGR2P11161 476 aaPredicted RBP12.45□□□□□ -0.42
CALR-201ENST00000316448 OR10J1P30954 320 aa12.45□□□□□ -0.42
CALR-201ENST00000316448 RHOBP62745 196 aa12.45□□□□□ -0.42
CALR-201ENST00000316448 AKIRIN2Q53H80 203 aa12.45□□□□□ -0.42
CALR-201ENST00000316448 SPNS3Q6ZMD2 512 aa12.45□□□□□ -0.42
CALR-201ENST00000316448 BCL6BQ8N143 479 aaPredicted RBP12.45□□□□□ -0.42
CALR-201ENST00000316448 SRSF8Q9BRL6 282 aaKnown RBP12.45□□□□□ -0.42
CALR-201ENST00000316448 SEPSECSQ9HD40 501 aaKnown RBP12.45□□□□□ -0.42
CALR-201ENST00000316448 ZANQ9Y493 2812 aa12.44□□□□□ -0.42
CALR-201ENST00000316448 CXorf1O96002 111 aa12.44□□□□□ -0.42
CALR-201ENST00000316448 CRYGCP07315 174 aa12.44□□□□□ -0.42
CALR-201ENST00000316448 ZNF562Q6V9R5 426 aa12.44□□□□□ -0.42
CALR-201ENST00000316448 TMEM219Q86XT9 240 aa12.44□□□□□ -0.42
CALR-201ENST00000316448 IQCF2Q8IXL9 164 aa12.44□□□□□ -0.42
CALR-201ENST00000316448 THAP8Q8NA92 274 aa12.44□□□□□ -0.42
CALR-201ENST00000316448 OR1P1Q8NH06 330 aa12.44□□□□□ -0.42
CALR-201ENST00000316448 TUBA4BQ9H853 241 aa12.44□□□□□ -0.42
CALR-201ENST00000316448 CSPG4Q6UVK1 2322 aa12.43□□□□□ -0.42
CALR-201ENST00000316448 IGHV7-81A0A0B4J1V7 117 aa12.43□□□□□ -0.42
CALR-201ENST00000316448 MDFIC2A0A1B0GVS7 189 aa12.43□□□□□ -0.42
CALR-201ENST00000316448 PAGE4O60829 102 aa12.43□□□□□ -0.42
CALR-201ENST00000316448 TVP23CQ96ET8 276 aa12.43□□□□□ -0.42
CALR-201ENST00000316448 ACY3Q96HD9 319 aa12.43□□□□□ -0.42
CALR-201ENST00000316448 HSPB9Q9BQS6 159 aa12.43□□□□□ -0.42
CALR-201ENST00000316448 LINC01548A6NM66 108 aa12.43□□□□□ -0.42
CALR-201ENST00000316448 ATF4P18848 351 aaPredicted RBP12.43□□□□□ -0.42
CALR-201ENST00000316448 PNRC1Q12796 327 aaPredicted RBP12.43□□□□□ -0.42
CALR-201ENST00000316448 SPATA31B1PQ5VZV4 182 aa12.43□□□□□ -0.42
CALR-201ENST00000316448 SSX3Q99909 188 aa12.43□□□□□ -0.42
CALR-201ENST00000316448 F11RQ9Y624 299 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms