RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 ZNF524Q96C55 264 aa7.38□□□□□ -1.23
CTC1-201ENST00000315684 PNRC2Q9NPJ4 139 aaKnown RBP7.38□□□□□ -1.23
CTC1-201ENST00000315684 TRAV3A0A0B4J244 114 aa7.38□□□□□ -1.23
CTC1-201ENST00000315684 RBFOX2O43251 390 aaKnown RBP eCLIP7.38□□□□□ -1.23
CTC1-201ENST00000315684 RAG2P55895 527 aa7.38□□□□□ -1.23
CTC1-201ENST00000315684 DEFB136Q30KP8 78 aa7.38□□□□□ -1.23
CTC1-201ENST00000315684 RAB24Q969Q5 203 aa7.38□□□□□ -1.23
CTC1-201ENST00000315684 C19orf84I3L1E1 186 aa7.38□□□□□ -1.23
CTC1-201ENST00000315684 APCSP02743 223 aa7.38□□□□□ -1.23
CTC1-201ENST00000315684 AREGP15514 252 aa7.38□□□□□ -1.23
CTC1-201ENST00000315684 NTF4P34130 210 aa7.38□□□□□ -1.23
CTC1-201ENST00000315684 SULT1A2P50226 295 aa7.38□□□□□ -1.23
CTC1-201ENST00000315684 ARTNQ5T4W7 220 aa7.38□□□□□ -1.23
CTC1-201ENST00000315684 OR1N2Q8NGR9 330 aa7.38□□□□□ -1.23
CTC1-201ENST00000315684 TRAF4Q9BUZ4 470 aaPredicted RBP7.38□□□□□ -1.23
CTC1-201ENST00000315684 TOMM7Q9P0U1 55 aa7.38□□□□□ -1.23
CTC1-201ENST00000315684 ZNF256Q9Y2P7 627 aaPredicted RBP7.38□□□□□ -1.23
CTC1-201ENST00000315684 SHISA9B4DS77 424 aa7.38□□□□□ -1.23
CTC1-201ENST00000315684 ZFP36P26651 326 aaKnown RBP7.38□□□□□ -1.23
CTC1-201ENST00000315684 CD300CQ08708 224 aa7.38□□□□□ -1.23
CTC1-201ENST00000315684 TMEM97Q5BJF2 176 aa7.38□□□□□ -1.23
CTC1-201ENST00000315684 IBA57Q5T440 356 aaKnown RBP7.38□□□□□ -1.23
CTC1-201ENST00000315684 MIEN1Q9BRT3 115 aa7.38□□□□□ -1.23
CTC1-201ENST00000315684 NBEAP1P0C6P0 100 aa7.37□□□□□ -1.23
CTC1-201ENST00000315684 CFHR2P36980 270 aa7.37□□□□□ -1.23
CTC1-201ENST00000315684 TMEM249Q2WGJ8 235 aa7.37□□□□□ -1.23
CTC1-201ENST00000315684 ZNF362Q5T0B9 420 aaPredicted RBP7.37□□□□□ -1.23
CTC1-201ENST00000315684 EIF4E3Q8N5X7 224 aaKnown RBP7.37□□□□□ -1.23
CTC1-201ENST00000315684 OR11H1Q8NG94 326 aa7.37□□□□□ -1.23
CTC1-201ENST00000315684 GALNT14Q96FL9 552 aa7.37□□□□□ -1.23
CTC1-201ENST00000315684 OR11H12B2RN74 326 aa7.37□□□□□ -1.23
CTC1-201ENST00000315684 TMEM155Q4W5P6 130 aa7.37□□□□□ -1.23
CTC1-201ENST00000315684 MIR17HGQ75NE6 70 aa7.37□□□□□ -1.23
CTC1-201ENST00000315684 ASB13Q8WXK3 278 aa7.37□□□□□ -1.23
CTC1-201ENST00000315684 ASCL2Q99929 193 aa7.37□□□□□ -1.23
CTC1-201ENST00000315684 SIGLEC9Q9Y336 463 aa7.37□□□□□ -1.23
CTC1-201ENST00000315684 HEATR5AQ86XA9 2040 aa7.37□□□□□ -1.23
CTC1-201ENST00000315684 IGKV1D-8A0A087WSZ0 117 aa7.37□□□□□ -1.23
CTC1-201ENST00000315684 MED13LQ71F56 2210 aa7.37□□□□□ -1.23
CTC1-201ENST00000315684 H7C2G1 150 aa7.37□□□□□ -1.23
CTC1-201ENST00000315684 ZNF343Q6P1L6 599 aa7.37□□□□□ -1.23
CTC1-201ENST00000315684 LYRM2Q9NU23 88 aaPredicted RBP7.37□□□□□ -1.23
CTC1-201ENST00000315684 ELOA3CA0A087WX78 387 aaPredicted RBP7.37□□□□□ -1.23
CTC1-201ENST00000315684 OVOL3O00110 214 aa7.37□□□□□ -1.23
CTC1-201ENST00000315684 ASIPP42127 132 aa7.37□□□□□ -1.23
CTC1-201ENST00000315684 RNF125Q96EQ8 232 aa7.37□□□□□ -1.23
CTC1-201ENST00000315684 SLC25A39Q9BZJ4 359 aaPredicted RBP7.37□□□□□ -1.23
CTC1-201ENST00000315684 E9PQ18 207 aa7.37□□□□□ -1.23
CTC1-201ENST00000315684 ATP6V0E1O15342 81 aa7.37□□□□□ -1.23
CTC1-201ENST00000315684 CFDP00746 253 aaPredicted RBP7.37□□□□□ -1.23
CTC1-201ENST00000315684 IGHV4-38-2P0DP08 117 aa7.37□□□□□ -1.23
CTC1-201ENST00000315684 GATA3P23771 443 aa7.37□□□□□ -1.23
CTC1-201ENST00000315684 DUTP33316 252 aaKnown RBP7.37□□□□□ -1.23
CTC1-201ENST00000315684 RAB9AP51151 201 aa7.37□□□□□ -1.23
CTC1-201ENST00000315684 C5orf64Q2M2E5 130 aa7.37□□□□□ -1.23
CTC1-201ENST00000315684 ZNF324BQ6AW86 544 aaPredicted RBP7.37□□□□□ -1.23
CTC1-201ENST00000315684 CLDN16Q9Y5I7 305 aa7.37□□□□□ -1.23
CTC1-201ENST00000315684 RAB19A4D1S5 217 aa7.36□□□□□ -1.23
CTC1-201ENST00000315684 M0R3E3 92 aa7.36□□□□□ -1.23
CTC1-201ENST00000315684 OR52E5Q8NH55 327 aa7.36□□□□□ -1.23
CTC1-201ENST00000315684 TBX15Q96SF7 602 aa7.36□□□□□ -1.23
CTC1-201ENST00000315684 ZNF253O75346 499 aa7.36□□□□□ -1.23
CTC1-201ENST00000315684 RPL29P47914 159 aaKnown RBP7.36□□□□□ -1.23
CTC1-201ENST00000315684 SPRNQ5BIV9 151 aa7.36□□□□□ -1.23
CTC1-201ENST00000315684 SLC25A48Q6ZT89 311 aaKnown RBP7.36□□□□□ -1.23
CTC1-201ENST00000315684 RARRES2Q99969 163 aa7.36□□□□□ -1.23
CTC1-201ENST00000315684 SDF2L1Q9HCN8 221 aa7.36□□□□□ -1.23
CTC1-201ENST00000315684 ZMAT5Q9UDW3 170 aaKnown RBP7.36□□□□□ -1.23
CTC1-201ENST00000315684 YTHDF2Q9Y5A9 579 aaKnown RBP7.36□□□□□ -1.23
CTC1-201ENST00000315684 TRBV6-7A0A0A0MS04 114 aa7.36□□□□□ -1.23
CTC1-201ENST00000315684 INAFM1C9JVW0 142 aa7.36□□□□□ -1.23
CTC1-201ENST00000315684 PPP1R17O96001 155 aa7.36□□□□□ -1.23
CTC1-201ENST00000315684 CD8AP01732 235 aa7.36□□□□□ -1.23
CTC1-201ENST00000315684 RPS11P62280 158 aaKnown RBP eCLIP7.36□□□□□ -1.23
CTC1-201ENST00000315684 AANATQ16613 207 aa7.36□□□□□ -1.23
CTC1-201ENST00000315684 Q6ZR03 302 aa7.36□□□□□ -1.23
CTC1-201ENST00000315684 RNF166Q96A37 237 aaPredicted RBP7.36□□□□□ -1.23
CTC1-201ENST00000315684 PEF1Q9UBV8 284 aaKnown RBP7.36□□□□□ -1.23
CTC1-201ENST00000315684 TBL2Q9Y4P3 447 aaKnown RBP7.36□□□□□ -1.23
CTC1-201ENST00000315684 B4DEV8 164 aa7.36□□□□□ -1.23
CTC1-201ENST00000315684 FHITP49789 147 aa7.36□□□□□ -1.23
CTC1-201ENST00000315684 HIST3H3Q16695 136 aa7.36□□□□□ -1.23
CTC1-201ENST00000315684 KLHDC1Q8N7A1 406 aa7.36□□□□□ -1.23
CTC1-201ENST00000315684 PSMB2P49721 201 aa7.36□□□□□ -1.23
CTC1-201ENST00000315684 SUMO2P61956 95 aaKnown RBP7.36□□□□□ -1.23
CTC1-201ENST00000315684 TMEM101Q96IK0 257 aa7.36□□□□□ -1.23
CTC1-201ENST00000315684 MED13Q9UHV7 2174 aa7.35□□□□□ -1.23
CTC1-201ENST00000315684 DENND4AQ7Z401 1863 aa7.35□□□□□ -1.23
CTC1-201ENST00000315684 TRAV12-3A0A0B4J271 114 aa7.35□□□□□ -1.23
CTC1-201ENST00000315684 C15orf61A6NNL5 157 aa7.35□□□□□ -1.23
CTC1-201ENST00000315684 ISLRO14498 428 aa7.35□□□□□ -1.23
CTC1-201ENST00000315684 IGHV4-39P01824 125 aa7.35□□□□□ -1.23
CTC1-201ENST00000315684 FAM162BQ5T6X4 162 aa7.35□□□□□ -1.23
CTC1-201ENST00000315684 ZMAT4Q9H898 229 aa7.35□□□□□ -1.23
CTC1-201ENST00000315684 TRGV1A0A0A0MS02 117 aa7.35□□□□□ -1.23
CTC1-201ENST00000315684 PRSS2P07478 247 aa7.35□□□□□ -1.23
CTC1-201ENST00000315684 IGFBP3P17936 291 aaPredicted RBP7.35□□□□□ -1.23
CTC1-201ENST00000315684 UBE2E1P51965 193 aa7.35□□□□□ -1.23
CTC1-201ENST00000315684 FAM3BP58499 235 aaPredicted RBP7.35□□□□□ -1.23
CTC1-201ENST00000315684 RNF212Q495C1 297 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms