RNA–Protein interactions for RNA: ENST00000302328.7

SCN11A-201, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN11A, Length 6,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-201ENST00000302328 OR10W1Q8NGF6 305 aa6.98□□□□□ -1.29
SCN11A-201ENST00000302328 VAMP8Q9BV40 100 aa6.98□□□□□ -1.29
SCN11A-201ENST00000302328 ARHGEF17Q96PE2 2063 aaPredicted RBP6.97□□□□□ -1.29
SCN11A-201ENST00000302328 TRAV21A0A0B4J279 112 aa6.97□□□□□ -1.29
SCN11A-201ENST00000302328 NAT1P18440 290 aa6.97□□□□□ -1.29
SCN11A-201ENST00000302328 SRSF9Q13242 221 aaKnown RBP eCLIP6.97□□□□□ -1.29
SCN11A-201ENST00000302328 RAB24Q969Q5 203 aa6.97□□□□□ -1.29
SCN11A-201ENST00000302328 IGHV4-30-2A0A087WSY4 118 aa6.97□□□□□ -1.29
SCN11A-201ENST00000302328 IGHV2-5P01817 119 aa6.97□□□□□ -1.29
SCN11A-201ENST00000302328 DAZAP2Q15038 168 aaPredicted RBP6.97□□□□□ -1.29
SCN11A-201ENST00000302328 ZNF880Q6PDB4 577 aa6.97□□□□□ -1.29
SCN11A-201ENST00000302328 OR1P1Q8NH06 330 aa6.97□□□□□ -1.29
SCN11A-201ENST00000302328 NDPQ00604 133 aa6.97□□□□□ -1.29
SCN11A-201ENST00000302328 CIRBPQ14011 172 aaKnown RBP6.97□□□□□ -1.29
SCN11A-201ENST00000302328 TMEM249Q2WGJ8 235 aa6.97□□□□□ -1.29
SCN11A-201ENST00000302328 CYB561D1Q8N8Q1 229 aa6.97□□□□□ -1.29
SCN11A-201ENST00000302328 MRAP2Q96G30 205 aa6.97□□□□□ -1.29
SCN11A-201ENST00000302328 UBE2E2Q96LR5 201 aa6.97□□□□□ -1.29
SCN11A-201ENST00000302328 RCHY1Q96PM5 261 aa6.97□□□□□ -1.29
SCN11A-201ENST00000302328 TRBV20OR9-2A0A075B6H5 130 aa6.97□□□□□ -1.29
SCN11A-201ENST00000302328 TRAV34A0A0B4J273 112 aa6.97□□□□□ -1.29
SCN11A-201ENST00000302328 FBLL1A6NHQ2 334 aaKnown RBP6.97□□□□□ -1.29
SCN11A-201ENST00000302328 RBFOX2O43251 390 aaKnown RBP eCLIP6.97□□□□□ -1.29
SCN11A-201ENST00000302328 INSP01308 110 aa6.97□□□□□ -1.29
SCN11A-201ENST00000302328 FOXL2NBQ6ZUU3 175 aa6.97□□□□□ -1.29
SCN11A-201ENST00000302328 PPP1R3EQ9H7J1 279 aa6.97□□□□□ -1.29
SCN11A-201ENST00000302328 IGKV1-27A0A075B6S5 117 aa6.96□□□□□ -1.29
SCN11A-201ENST00000302328 ZNF688P0C7X2 276 aa6.96□□□□□ -1.29
SCN11A-201ENST00000302328 LHFPL4Q7Z7J7 247 aa6.96□□□□□ -1.29
SCN11A-201ENST00000302328 HS3ST6Q96QI5 342 aa6.96□□□□□ -1.29
SCN11A-201ENST00000302328 KNTC1P50748 2209 aa6.96□□□□□ -1.29
SCN11A-201ENST00000302328 KNL1Q8NG31 2342 aa6.96□□□□□ -1.29
SCN11A-201ENST00000302328 FAM74A7A6NL05 159 aa6.96□□□□□ -1.29
SCN11A-201ENST00000302328 CLLU1Q5K131 121 aa6.96□□□□□ -1.29
SCN11A-201ENST00000302328 CNTRLQ7Z7A1 2325 aa6.96□□□□□ -1.29
SCN11A-201ENST00000302328 H3BQ15 152 aa6.96□□□□□ -1.3
SCN11A-201ENST00000302328 PLA2G10O15496 165 aa6.96□□□□□ -1.3
SCN11A-201ENST00000302328 CD8AP01732 235 aa6.96□□□□□ -1.3
SCN11A-201ENST00000302328 CD55P08174 381 aa6.96□□□□□ -1.3
SCN11A-201ENST00000302328 LGALS3P17931 250 aaKnown RBP6.96□□□□□ -1.3
SCN11A-201ENST00000302328 UCP1P25874 307 aa6.96□□□□□ -1.3
SCN11A-201ENST00000302328 DEFB112Q30KQ8 113 aa6.96□□□□□ -1.3
SCN11A-201ENST00000302328 IGKV1D-13A0A0B4J2D9 117 aa6.96□□□□□ -1.3
SCN11A-201ENST00000302328 A0A1B0GUS0 222 aa6.96□□□□□ -1.3
SCN11A-201ENST00000302328 IGKV1-13P0DP09 117 aa6.96□□□□□ -1.3
SCN11A-201ENST00000302328 GATA2P23769 480 aaPredicted RBP6.96□□□□□ -1.3
SCN11A-201ENST00000302328 PAPPA-AS1Q5QFB9 102 aa6.96□□□□□ -1.3
SCN11A-201ENST00000302328 OR11H1Q8NG94 326 aa6.96□□□□□ -1.3
SCN11A-201ENST00000302328 NPDC1Q9NQX5 325 aaPredicted RBP6.96□□□□□ -1.3
SCN11A-201ENST00000302328 Q6P435 159 aa6.96□□□□□ -1.3
SCN11A-201ENST00000302328 TMEM191AQ9H0A3 160 aa6.96□□□□□ -1.3
SCN11A-201ENST00000302328 VPREB3Q9UKI3 123 aa6.96□□□□□ -1.3
SCN11A-201ENST00000302328 CGAP01215 116 aa6.95□□□□□ -1.3
SCN11A-201ENST00000302328 HOXB4P17483 251 aaPredicted RBP6.95□□□□□ -1.3
SCN11A-201ENST00000302328 RPL15P61313 204 aaKnown RBP6.95□□□□□ -1.3
SCN11A-201ENST00000302328 KLK15Q9H2R5 256 aa6.95□□□□□ -1.3
SCN11A-201ENST00000302328 SIGLEC9Q9Y336 463 aa6.95□□□□□ -1.3
SCN11A-201ENST00000302328 IGKV1-12A0A0C4DH73 117 aa6.95□□□□□ -1.3
SCN11A-201ENST00000302328 IGKV1D-12P01611 117 aa6.95□□□□□ -1.3
SCN11A-201ENST00000302328 C18orf12Q96KH6 178 aa6.95□□□□□ -1.3
SCN11A-201ENST00000302328 PEX7O00628 323 aa6.95□□□□□ -1.3
SCN11A-201ENST00000302328 EIF3GO75821 320 aaKnown RBP eCLIP6.95□□□□□ -1.3
SCN11A-201ENST00000302328 IGLV1-44P01699 117 aa6.95□□□□□ -1.3
SCN11A-201ENST00000302328 ELOBQ15370 118 aa6.95□□□□□ -1.3
SCN11A-201ENST00000302328 C9orf66Q5T8R8 295 aa6.95□□□□□ -1.3
SCN11A-201ENST00000302328 LYRM7Q5U5X0 104 aa6.95□□□□□ -1.3
SCN11A-201ENST00000302328 MIR17HGQ75NE6 70 aa6.95□□□□□ -1.3
SCN11A-201ENST00000302328 TBX15Q96SF7 602 aa6.95□□□□□ -1.3
SCN11A-201ENST00000302328 RTBDNQ9BSG5 229 aaPredicted RBP6.95□□□□□ -1.3
SCN11A-201ENST00000302328 CABIN1Q9Y6J0 2220 aa6.95□□□□□ -1.3
SCN11A-201ENST00000302328 ATP6V0E1O15342 81 aa6.95□□□□□ -1.3
SCN11A-201ENST00000302328 PMS2P11Q13670 270 aa6.95□□□□□ -1.3
SCN11A-201ENST00000302328 OR4C5Q8NGB2 326 aa6.95□□□□□ -1.3
SCN11A-201ENST00000302328 ASCL2Q99929 193 aa6.95□□□□□ -1.3
SCN11A-201ENST00000302328 C7orf66A4D0T2 115 aa6.95□□□□□ -1.3
SCN11A-201ENST00000302328 RNASE1P07998 156 aaKnown RBP6.95□□□□□ -1.3
SCN11A-201ENST00000302328 HINT1P49773 126 aaPredicted RBP6.95□□□□□ -1.3
SCN11A-201ENST00000302328 RIPPLY3P57055 190 aa6.95□□□□□ -1.3
SCN11A-201ENST00000302328 CIARTQ8N365 385 aaPredicted RBP6.95□□□□□ -1.3
SCN11A-201ENST00000302328 PI4KAP42356 2102 aa6.95□□□□□ -1.3
SCN11A-201ENST00000302328 TRGV1A0A0A0MS02 117 aa6.94□□□□□ -1.3
SCN11A-201ENST00000302328 A0A0A6YYD4 124 aa6.94□□□□□ -1.3
SCN11A-201ENST00000302328 C5orf52A6NGY3 159 aa6.94□□□□□ -1.3
SCN11A-201ENST00000302328 CCKARP32238 428 aa6.94□□□□□ -1.3
SCN11A-201ENST00000302328 TOMM20LQ6UXN7 152 aa6.94□□□□□ -1.3
SCN11A-201ENST00000302328 NHLRC3Q5JS37 347 aa6.94□□□□□ -1.3
SCN11A-201ENST00000302328 TMEM144Q7Z5S9 345 aa6.94□□□□□ -1.3
SCN11A-201ENST00000302328 FAM24BQ8N5W8 94 aa6.94□□□□□ -1.3
SCN11A-201ENST00000302328 TDGF1P3P51864 188 aa6.94□□□□□ -1.3
SCN11A-201ENST00000302328 FBLN7Q53RD9 439 aa6.94□□□□□ -1.3
SCN11A-201ENST00000302328 DAZ1Q9NQZ3 744 aaKnown RBP6.94□□□□□ -1.3
SCN11A-201ENST00000302328 BIVMQ86UB2 503 aa6.94□□□□□ -1.3
SCN11A-201ENST00000302328 LRTM2Q8N967 370 aa6.94□□□□□ -1.3
SCN11A-201ENST00000302328 ZFP30Q9Y2G7 519 aa6.94□□□□□ -1.3
SCN11A-201ENST00000302328 MDC1Q14676 2089 aaKnown RBP6.94□□□□□ -1.3
SCN11A-201ENST00000302328 FCN3O75636 299 aa6.94□□□□□ -1.3
SCN11A-201ENST00000302328 DAD1P61803 113 aa6.94□□□□□ -1.3
SCN11A-201ENST00000302328 PLA2G2AP14555 144 aa6.93□□□□□ -1.3
SCN11A-201ENST00000302328 HNRNPA3P51991 378 aaKnown RBP6.93□□□□□ -1.3
SCN11A-201ENST00000302328 AWAT1Q58HT5 328 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms