RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 IGHV3-48P01763 117 aa10.63□□□□□ -0.71
TVP23A-201ENST00000299866 CSN3P07498 182 aa10.63□□□□□ -0.71
TVP23A-201ENST00000299866 RPS20P60866 119 aaKnown RBP10.63□□□□□ -0.71
TVP23A-201ENST00000299866 FNDC4Q9H6D8 234 aaPredicted RBP10.63□□□□□ -0.71
TVP23A-201ENST00000299866 CD5LO43866 347 aa10.62□□□□□ -0.71
TVP23A-201ENST00000299866 AGFG2O95081 481 aa10.62□□□□□ -0.71
TVP23A-201ENST00000299866 PGLYRP4Q96LB8 373 aa10.62□□□□□ -0.71
TVP23A-201ENST00000299866 CXXC4Q9H2H0 198 aa10.62□□□□□ -0.71
TVP23A-201ENST00000299866 TMEM14BQ9NUH8 114 aa10.62□□□□□ -0.71
TVP23A-201ENST00000299866 GAGE10A6NGK3 116 aa10.62□□□□□ -0.71
TVP23A-201ENST00000299866 PEX7O00628 323 aa10.62□□□□□ -0.71
TVP23A-201ENST00000299866 CFIP05156 583 aa10.62□□□□□ -0.71
TVP23A-201ENST00000299866 LHFPL4Q7Z7J7 247 aa10.62□□□□□ -0.71
TVP23A-201ENST00000299866 PRR7Q8TB68 274 aa10.62□□□□□ -0.71
TVP23A-201ENST00000299866 CHRDL1Q9BU40 450 aa10.62□□□□□ -0.71
TVP23A-201ENST00000299866 SLC25A2Q9BXI2 301 aa10.62□□□□□ -0.71
TVP23A-201ENST00000299866 FOXA2Q9Y261 457 aaPredicted RBP10.62□□□□□ -0.71
TVP23A-201ENST00000299866 PTPRBP23467 1997 aa10.62□□□□□ -0.71
TVP23A-201ENST00000299866 C7orf71A4D174 169 aa10.62□□□□□ -0.71
TVP23A-201ENST00000299866 TCTAP57738 103 aa10.62□□□□□ -0.71
TVP23A-201ENST00000299866 ABHD17BQ5VST6 288 aa10.62□□□□□ -0.71
TVP23A-201ENST00000299866 ZNRF1Q8ND25 227 aa10.62□□□□□ -0.71
TVP23A-201ENST00000299866 DEFB127Q9H1M4 99 aa10.62□□□□□ -0.71
TVP23A-201ENST00000299866 SCRT2Q9NQ03 307 aa10.62□□□□□ -0.71
TVP23A-201ENST00000299866 PEF1Q9UBV8 284 aaKnown RBP10.62□□□□□ -0.71
TVP23A-201ENST00000299866 PRRC2CQ9Y520 2896 aaKnown RBP10.61□□□□□ -0.71
TVP23A-201ENST00000299866 HIST1H1EP10412 219 aaKnown RBP10.61□□□□□ -0.71
TVP23A-201ENST00000299866 IGFBP4P22692 258 aa10.61□□□□□ -0.71
TVP23A-201ENST00000299866 GPR183P32249 361 aa10.61□□□□□ -0.71
TVP23A-201ENST00000299866 FAM167A-AS1Q96KT0 104 aa10.61□□□□□ -0.71
TVP23A-201ENST00000299866 JPT1Q9UK76 154 aa10.61□□□□□ -0.71
TVP23A-201ENST00000299866 MRPS17Q9Y2R5 130 aaKnown RBP10.61□□□□□ -0.71
TVP23A-201ENST00000299866 HBBP68871 147 aa10.61□□□□□ -0.71
TVP23A-201ENST00000299866 RTL8BQ17RB0 113 aa10.61□□□□□ -0.71
TVP23A-201ENST00000299866 FAM71F2Q6NXP2 309 aa10.61□□□□□ -0.71
TVP23A-201ENST00000299866 FAM90A1Q86YD7 464 aa10.61□□□□□ -0.71
TVP23A-201ENST00000299866 PAXXQ9BUH6 204 aa10.61□□□□□ -0.71
TVP23A-201ENST00000299866 MAP1LC3CQ9BXW4 147 aa10.61□□□□□ -0.71
TVP23A-201ENST00000299866 CD46P15529 392 aa10.6□□□□□ -0.71
TVP23A-201ENST00000299866 TMEM11P17152 192 aa10.6□□□□□ -0.71
TVP23A-201ENST00000299866 FAM231DQ6ZW35 169 aa10.6□□□□□ -0.71
TVP23A-201ENST00000299866 OR10W1Q8NGF6 305 aa10.6□□□□□ -0.71
TVP23A-201ENST00000299866 CT55Q8WUE5 264 aa10.6□□□□□ -0.71
TVP23A-201ENST00000299866 BLNKQ8WV28 456 aa10.6□□□□□ -0.71
TVP23A-201ENST00000299866 SMIM12Q96EX1 92 aa10.6□□□□□ -0.71
TVP23A-201ENST00000299866 FAM231BA6NCW3 169 aa10.6□□□□□ -0.71
TVP23A-201ENST00000299866 SSBP2P81877 361 aaPredicted RBP10.6□□□□□ -0.71
TVP23A-201ENST00000299866 HIST1H1AQ02539 215 aaPredicted RBP10.6□□□□□ -0.71
TVP23A-201ENST00000299866 ZNF329Q86UD4 541 aa10.6□□□□□ -0.71
TVP23A-201ENST00000299866 CRXO43186 299 aaPredicted RBP10.6□□□□□ -0.71
TVP23A-201ENST00000299866 COX7A2P2O60397 106 aa10.6□□□□□ -0.71
TVP23A-201ENST00000299866 IGLC1P0CG04 106 aa10.6□□□□□ -0.71
TVP23A-201ENST00000299866 SAA2P0DJI9 122 aaPredicted RBP10.6□□□□□ -0.71
TVP23A-201ENST00000299866 KIR2DS2P43631 304 aa10.6□□□□□ -0.71
TVP23A-201ENST00000299866 LOXL3P58215 753 aa10.6□□□□□ -0.71
TVP23A-201ENST00000299866 ARF6P62330 175 aa10.6□□□□□ -0.71
TVP23A-201ENST00000299866 ARFGEF3Q5TH69 2177 aa10.6□□□□□ -0.71
TVP23A-201ENST00000299866 DDB2Q92466 427 aa10.6□□□□□ -0.71
TVP23A-201ENST00000299866 SVILO95425 2214 aa10.59□□□□□ -0.71
TVP23A-201ENST00000299866 CT45A1Q5HYN5 189 aa10.59□□□□□ -0.71
TVP23A-201ENST00000299866 CT45A3Q8NHU0 189 aa10.59□□□□□ -0.71
TVP23A-201ENST00000299866 AP1S3Q96PC3 154 aa10.59□□□□□ -0.71
TVP23A-201ENST00000299866 SPOCK3Q9BQ16 436 aa10.59□□□□□ -0.71
TVP23A-201ENST00000299866 A0A1B0GXF2 115 aa10.59□□□□□ -0.71
TVP23A-201ENST00000299866 SLC25A5P05141 298 aaKnown RBP10.59□□□□□ -0.71
TVP23A-201ENST00000299866 FAM162BQ5T6X4 162 aa10.59□□□□□ -0.71
TVP23A-201ENST00000299866 OR1B1Q8NGR6 318 aa10.59□□□□□ -0.71
TVP23A-201ENST00000299866 ZNF835Q9Y2P0 537 aa10.59□□□□□ -0.71
TVP23A-201ENST00000299866 LINC00322Q6ZN03 302 aaPredicted RBP10.59□□□□□ -0.71
TVP23A-201ENST00000299866 FER1L6-AS1Q8NA97 138 aa10.59□□□□□ -0.71
TVP23A-201ENST00000299866 IGKV1D-17A0A075B6S4 117 aa10.58□□□□□ -0.72
TVP23A-201ENST00000299866 HTR1DP28221 377 aa10.58□□□□□ -0.72
TVP23A-201ENST00000299866 CXCL12P48061 93 aa10.58□□□□□ -0.72
TVP23A-201ENST00000299866 CLEC2AQ6UVW9 174 aa10.58□□□□□ -0.72
TVP23A-201ENST00000299866 BPIFA4PQ86YQ2 179 aa10.58□□□□□ -0.72
TVP23A-201ENST00000299866 CALYQ9NYX4 217 aa10.58□□□□□ -0.72
TVP23A-201ENST00000299866 H3BTX0 84 aa10.58□□□□□ -0.72
TVP23A-201ENST00000299866 CHEK1O14757 476 aa10.58□□□□□ -0.72
TVP23A-201ENST00000299866 HLA-DRB1P01911 266 aa10.58□□□□□ -0.72
TVP23A-201ENST00000299866 IGHV1-2P23083 117 aa10.58□□□□□ -0.72
TVP23A-201ENST00000299866 CHCHD1Q96BP2 118 aaKnown RBP10.58□□□□□ -0.72
TVP23A-201ENST00000299866 TMUB1Q9BVT8 246 aa10.58□□□□□ -0.72
TVP23A-201ENST00000299866 C19orf24Q9BVV8 132 aa10.58□□□□□ -0.72
TVP23A-201ENST00000299866 ABI3Q9P2A4 366 aa10.58□□□□□ -0.72
TVP23A-201ENST00000299866 ICE1Q9Y2F5 2266 aa10.58□□□□□ -0.72
TVP23A-201ENST00000299866 C10orf113Q5VZT2 155 aa10.57□□□□□ -0.72
TVP23A-201ENST00000299866 ATP5L2Q7Z4Y8 100 aa10.57□□□□□ -0.72
TVP23A-201ENST00000299866 TEX45Q8NA69 505 aa10.57□□□□□ -0.72
TVP23A-201ENST00000299866 OR2Z1Q8NG97 314 aa10.57□□□□□ -0.72
TVP23A-201ENST00000299866 PRNDQ9UKY0 176 aa10.57□□□□□ -0.72
TVP23A-201ENST00000299866 TEX50A0A1B0GTY4 177 aa10.57□□□□□ -0.72
TVP23A-201ENST00000299866 LIPFP07098 398 aa10.57□□□□□ -0.72
TVP23A-201ENST00000299866 PRCDQ00LT1 54 aa10.57□□□□□ -0.72
TVP23A-201ENST00000299866 GTSF1Q8WW33 167 aa10.57□□□□□ -0.72
TVP23A-201ENST00000299866 MRPL32Q9BYC8 188 aaKnown RBP10.57□□□□□ -0.72
TVP23A-201ENST00000299866 ZNF430Q9H8G1 570 aaPredicted RBP10.57□□□□□ -0.72
TVP23A-201ENST00000299866 ZNRD1Q9P1U0 126 aa10.57□□□□□ -0.72
TVP23A-201ENST00000299866 HILPDAQ9Y5L2 63 aa10.57□□□□□ -0.72
TVP23A-201ENST00000299866 PGPA6NDG6 321 aa10.57□□□□□ -0.72
TVP23A-201ENST00000299866 SRRM4A7MD48 611 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms