RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 USP9YO00507 2555 aaPredicted RBP12.45□□□□□ -0.42
LSM6-201ENST00000296581 A0A1W2PN81 502 aa12.45□□□□□ -0.42
LSM6-201ENST00000296581 E7EUB6 86 aa12.45□□□□□ -0.42
LSM6-201ENST00000296581 PRH1P02810 166 aa12.45□□□□□ -0.42
LSM6-201ENST00000296581 OR13C7P0DN81 318 aa12.45□□□□□ -0.42
LSM6-201ENST00000296581 SLC25A16P16260 332 aa12.45□□□□□ -0.42
LSM6-201ENST00000296581 CHRNA7P36544 502 aa12.45□□□□□ -0.42
LSM6-201ENST00000296581 CAMLGP49069 296 aa12.45□□□□□ -0.42
LSM6-201ENST00000296581 KRTAP10-9P60411 292 aa12.45□□□□□ -0.42
LSM6-201ENST00000296581 ERVFC1-1P60608 527 aa12.45□□□□□ -0.42
LSM6-201ENST00000296581 DLK1P80370 383 aa12.45□□□□□ -0.42
LSM6-201ENST00000296581 C2orf83Q53S99 150 aa12.45□□□□□ -0.42
LSM6-201ENST00000296581 DYNAPQ8N1N2 210 aa12.45□□□□□ -0.42
LSM6-201ENST00000296581 URGCP-MRPS24S4R325 110 aa12.45□□□□□ -0.42
LSM6-201ENST00000296581 AMBPP02760 352 aa12.45□□□□□ -0.42
LSM6-201ENST00000296581 FHITP49789 147 aa12.45□□□□□ -0.42
LSM6-201ENST00000296581 CLEC12BQ2HXU8 276 aa12.45□□□□□ -0.42
LSM6-201ENST00000296581 OR10W1Q8NGF6 305 aa12.45□□□□□ -0.42
LSM6-201ENST00000296581 RNASE8Q8TDE3 154 aaKnown RBP12.45□□□□□ -0.42
LSM6-201ENST00000296581 AJUBAQ96IF1 538 aa12.45□□□□□ -0.42
LSM6-201ENST00000296581 PITPNC1Q9UKF7 332 aa12.45□□□□□ -0.42
LSM6-201ENST00000296581 CHTOPQ9Y3Y2 248 aaKnown RBP12.45□□□□□ -0.42
LSM6-201ENST00000296581 TACC2O95359 2948 aa12.44□□□□□ -0.42
LSM6-201ENST00000296581 A0A087WWC5 75 aa12.44□□□□□ -0.42
LSM6-201ENST00000296581 A0A1B0GW64 132 aa12.44□□□□□ -0.42
LSM6-201ENST00000296581 TGOLN2O43493 480 aa12.44□□□□□ -0.42
LSM6-201ENST00000296581 TCF21O43680 179 aa12.44□□□□□ -0.42
LSM6-201ENST00000296581 GCGP01275 180 aa12.44□□□□□ -0.42
LSM6-201ENST00000296581 RNASE2P10153 161 aaKnown RBP12.44□□□□□ -0.42
LSM6-201ENST00000296581 SERF2P84101 59 aa12.44□□□□□ -0.42
LSM6-201ENST00000296581 C10orf55Q5SWW7 151 aa12.44□□□□□ -0.42
LSM6-201ENST00000296581 DPPA3Q6W0C5 159 aa12.44□□□□□ -0.42
LSM6-201ENST00000296581 PPP1R27Q86WC6 154 aa12.44□□□□□ -0.42
LSM6-201ENST00000296581 WDR83OSQ9Y284 106 aa12.44□□□□□ -0.42
LSM6-201ENST00000296581 MOSP00540 346 aa12.44□□□□□ -0.42
LSM6-201ENST00000296581 IGKV1D-33P01593 117 aa12.44□□□□□ -0.42
LSM6-201ENST00000296581 IGKV1-33P01594 117 aa12.44□□□□□ -0.42
LSM6-201ENST00000296581 TMEM183AQ8IXX5 376 aa12.44□□□□□ -0.42
LSM6-201ENST00000296581 NPBQ8NG41 125 aa12.44□□□□□ -0.42
LSM6-201ENST00000296581 FAM213BQ8TBF2 198 aa12.44□□□□□ -0.42
LSM6-201ENST00000296581 CDKN1BP46527 198 aa12.43□□□□□ -0.42
LSM6-201ENST00000296581 ERHP84090 104 aaKnown RBP12.43□□□□□ -0.42
LSM6-201ENST00000296581 WT1-ASQ06250 92 aa12.43□□□□□ -0.42
LSM6-201ENST00000296581 ZNF616Q08AN1 781 aa12.43□□□□□ -0.42
LSM6-201ENST00000296581 EBI3Q14213 229 aa12.43□□□□□ -0.42
LSM6-201ENST00000296581 SOHLH1Q5JUK2 328 aa12.43□□□□□ -0.42
LSM6-201ENST00000296581 EAF1Q96JC9 268 aaPredicted RBP12.43□□□□□ -0.42
LSM6-201ENST00000296581 FBXL15Q9H469 300 aa12.43□□□□□ -0.42
LSM6-201ENST00000296581 BEX4Q9NWD9 120 aaPredicted RBP12.43□□□□□ -0.42
LSM6-201ENST00000296581 FBN2P35556 2912 aa12.43□□□□□ -0.42
LSM6-201ENST00000296581 A0A1W2PPQ1 181 aa12.42□□□□□ -0.42
LSM6-201ENST00000296581 NDUFA3O95167 84 aa12.42□□□□□ -0.42
LSM6-201ENST00000296581 HNF1AP20823 631 aa12.42□□□□□ -0.42
LSM6-201ENST00000296581 TAGLN2P37802 199 aaKnown RBP12.42□□□□□ -0.42
LSM6-201ENST00000296581 MRPL52Q86TS9 123 aaKnown RBP12.42□□□□□ -0.42
LSM6-201ENST00000296581 OR2T10Q8NGZ9 312 aa12.42□□□□□ -0.42
LSM6-201ENST00000296581 C1orf159Q96HA4 380 aa12.42□□□□□ -0.42
LSM6-201ENST00000296581 RCC1LQ96I51 464 aaKnown RBP12.42□□□□□ -0.42
LSM6-201ENST00000296581 NPCDR1Q9BY65 106 aa12.42□□□□□ -0.42
LSM6-201ENST00000296581 CRYBG3Q68DQ2 2970 aa12.42□□□□□ -0.42
LSM6-201ENST00000296581 A0A096LNT2 108 aa12.42□□□□□ -0.42
LSM6-201ENST00000296581 CENPVL3A0A0U1RRI6 287 aa12.42□□□□□ -0.42
LSM6-201ENST00000296581 FNDC10F2Z333 226 aa12.42□□□□□ -0.42
LSM6-201ENST00000296581 NBR2O15453 112 aa12.42□□□□□ -0.42
LSM6-201ENST00000296581 MSMBP08118 114 aa12.42□□□□□ -0.42
LSM6-201ENST00000296581 RPL27AP46776 148 aaKnown RBP12.42□□□□□ -0.42
LSM6-201ENST00000296581 COMPP49747 757 aaPredicted RBP12.42□□□□□ -0.42
LSM6-201ENST00000296581 TEX38Q6PEX7 206 aa12.42□□□□□ -0.42
LSM6-201ENST00000296581 Q8N6K4 173 aa12.42□□□□□ -0.42
LSM6-201ENST00000296581 PLXNB1O43157 2135 aa12.42□□□□□ -0.42
LSM6-201ENST00000296581 NPFFO15130 113 aa12.41□□□□□ -0.42
LSM6-201ENST00000296581 MPDU1O75352 247 aa12.41□□□□□ -0.42
LSM6-201ENST00000296581 SAA4P35542 130 aa12.41□□□□□ -0.42
LSM6-201ENST00000296581 MMDQ15546 238 aa12.41□□□□□ -0.42
LSM6-201ENST00000296581 TNXAQ16473 311 aa12.41□□□□□ -0.42
LSM6-201ENST00000296581 TREML4Q6UXN2 200 aa12.41□□□□□ -0.42
LSM6-201ENST00000296581 PBDC1Q9BVG4 233 aa12.41□□□□□ -0.42
LSM6-201ENST00000296581 ACTL6BO94805 426 aa12.41□□□□□ -0.42
LSM6-201ENST00000296581 SSBP2P81877 361 aaPredicted RBP12.41□□□□□ -0.42
LSM6-201ENST00000296581 FBLN7Q53RD9 439 aa12.41□□□□□ -0.42
LSM6-201ENST00000296581 LRRC75A-AS1Q8N1F1 130 aa12.41□□□□□ -0.42
LSM6-201ENST00000296581 IGLC7A0M8Q6 106 aa12.4□□□□□ -0.42
LSM6-201ENST00000296581 H3BQ15 152 aa12.4□□□□□ -0.42
LSM6-201ENST00000296581 CD24P25063 80 aa12.4□□□□□ -0.42
LSM6-201ENST00000296581 DEFB113Q30KQ7 82 aa12.4□□□□□ -0.42
LSM6-201ENST00000296581 MRPL41Q8IXM3 137 aaKnown RBP12.4□□□□□ -0.42
LSM6-201ENST00000296581 PIP4P2Q8N4L2 257 aa12.4□□□□□ -0.42
LSM6-201ENST00000296581 PSMG3-AS1Q96PY0 264 aa12.4□□□□□ -0.42
LSM6-201ENST00000296581 NPVFQ9HCQ7 196 aa12.4□□□□□ -0.42
LSM6-201ENST00000296581 RPRMQ9NS64 109 aa12.4□□□□□ -0.42
LSM6-201ENST00000296581 LSM4Q9Y4Z0 139 aaKnown RBP12.4□□□□□ -0.42
LSM6-201ENST00000296581 ASH1LQ9NR48 2969 aaKnown RBP12.4□□□□□ -0.42
LSM6-201ENST00000296581 PTPN13Q12923 2485 aa12.4□□□□□ -0.42
LSM6-201ENST00000296581 ANKRD17O75179 2603 aaKnown RBP12.4□□□□□ -0.42
LSM6-201ENST00000296581 KIR2DL5BA0A0G2JN68 375 aa12.4□□□□□ -0.42
LSM6-201ENST00000296581 KIR2DL5BA0A0G2JPC4 375 aa12.4□□□□□ -0.42
LSM6-201ENST00000296581 B4DSR2 109 aa12.4□□□□□ -0.42
LSM6-201ENST00000296581 C17orf112F2Z3M2 114 aa12.4□□□□□ -0.42
LSM6-201ENST00000296581 RPL29P47914 159 aaKnown RBP12.4□□□□□ -0.42
LSM6-201ENST00000296581 HAGHQ16775 308 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms