RNA–Protein interactions for RNA: ENST00000296325.9

LRPAP1-201, Transcript of LDL receptor related protein associated protein 1, humanhuman

TSL 1 (best)

Gene LRPAP1, Length 1,078 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-201ENST00000296325 PDCD5O14737 125 aa12.37□□□□□ -0.43
LRPAP1-201ENST00000296325 LPAR6P43657 344 aa12.37□□□□□ -0.43
LRPAP1-201ENST00000296325 FXYD4P59646 89 aa12.37□□□□□ -0.43
LRPAP1-201ENST00000296325 MLLT11Q13015 90 aaPredicted RBP12.37□□□□□ -0.43
LRPAP1-201ENST00000296325 TPRA1Q86W33 373 aa12.37□□□□□ -0.43
LRPAP1-201ENST00000296325 PACRGLQ8N7B6 248 aa12.37□□□□□ -0.43
LRPAP1-201ENST00000296325 TSC22D3Q99576 134 aa12.37□□□□□ -0.43
LRPAP1-201ENST00000296325 IGHV3OR16-12A0A075B7B8 117 aa12.36□□□□□ -0.43
LRPAP1-201ENST00000296325 PTGES3LE9PB15 166 aa12.36□□□□□ -0.43
LRPAP1-201ENST00000296325 RLN1P04808 185 aa12.36□□□□□ -0.43
LRPAP1-201ENST00000296325 HSMCR30P0CW71 290 aa12.36□□□□□ -0.43
LRPAP1-201ENST00000296325 DAD1P61803 113 aa12.36□□□□□ -0.43
LRPAP1-201ENST00000296325 PRCDQ00LT1 54 aa12.36□□□□□ -0.43
LRPAP1-201ENST00000296325 TMEM17Q86X19 198 aa12.36□□□□□ -0.43
LRPAP1-201ENST00000296325 ZNF709Q8N972 641 aa12.36□□□□□ -0.43
LRPAP1-201ENST00000296325 FRZBQ92765 325 aa12.36□□□□□ -0.43
LRPAP1-201ENST00000296325 MRPL36Q9P0J6 103 aaKnown RBP12.36□□□□□ -0.43
LRPAP1-201ENST00000296325 PGLYRP1O75594 196 aaPredicted RBP12.35□□□□□ -0.43
LRPAP1-201ENST00000296325 EIF2B2P49770 351 aaKnown RBP12.35□□□□□ -0.43
LRPAP1-201ENST00000296325 SNRPD3P62318 126 aaKnown RBP12.35□□□□□ -0.43
LRPAP1-201ENST00000296325 GDF5OSQ5U4N7 250 aa12.35□□□□□ -0.43
LRPAP1-201ENST00000296325 C16orf54Q6UWD8 224 aa12.35□□□□□ -0.43
LRPAP1-201ENST00000296325 GSG1LQ6UXU4 331 aa12.35□□□□□ -0.43
LRPAP1-201ENST00000296325 HOGA1Q86XE5 327 aa12.35□□□□□ -0.43
LRPAP1-201ENST00000296325 C8orf4Q9NR00 106 aa12.35□□□□□ -0.43
LRPAP1-201ENST00000296325 LOC102723971A0A1B0GUV8 181 aa12.34□□□□□ -0.43
LRPAP1-201ENST00000296325 CASQ2O14958 399 aaPredicted RBP12.34□□□□□ -0.43
LRPAP1-201ENST00000296325 IGKV1-17P01599 117 aa12.34□□□□□ -0.43
LRPAP1-201ENST00000296325 RAB3BP20337 219 aa12.34□□□□□ -0.43
LRPAP1-201ENST00000296325 AP2S1P53680 142 aaPredicted RBP12.34□□□□□ -0.43
LRPAP1-201ENST00000296325 CCL18P55774 89 aa12.34□□□□□ -0.43
LRPAP1-201ENST00000296325 C1orf158Q8N1D5 194 aa12.34□□□□□ -0.43
LRPAP1-201ENST00000296325 CLUHP3Q96NS8 147 aa12.34□□□□□ -0.43
LRPAP1-201ENST00000296325 CCDC90BQ9GZT6 254 aa12.34□□□□□ -0.43
LRPAP1-201ENST00000296325 CLN5O75503 358 aa12.33□□□□□ -0.44
LRPAP1-201ENST00000296325 SCGNO76038 276 aa12.33□□□□□ -0.44
LRPAP1-201ENST00000296325 NKX2-1P43699 371 aaPredicted RBP12.33□□□□□ -0.44
LRPAP1-201ENST00000296325 HOXA1P49639 335 aaPredicted RBP12.33□□□□□ -0.44
LRPAP1-201ENST00000296325 FXYD7P58549 80 aa12.33□□□□□ -0.44
LRPAP1-201ENST00000296325 BORCS5Q969J3 196 aa12.33□□□□□ -0.44
LRPAP1-201ENST00000296325 NARS2Q96I59 477 aaKnown RBP12.33□□□□□ -0.44
LRPAP1-201ENST00000296325 Q9H3A6 140 aa12.33□□□□□ -0.44
LRPAP1-201ENST00000296325 HBE1P02100 147 aa12.32□□□□□ -0.44
LRPAP1-201ENST00000296325 HSPE1P61604 102 aaKnown RBP12.32□□□□□ -0.44
LRPAP1-201ENST00000296325 SEC22AQ96IW7 307 aa12.32□□□□□ -0.44
LRPAP1-201ENST00000296325 FNDC4Q9H6D8 234 aaPredicted RBP12.32□□□□□ -0.44
LRPAP1-201ENST00000296325 Q9H8V8 135 aa12.32□□□□□ -0.44
LRPAP1-201ENST00000296325 NRN1Q9NPD7 142 aa12.32□□□□□ -0.44
LRPAP1-201ENST00000296325 INS-IGF2F8WCM5 200 aa12.31□□□□□ -0.44
LRPAP1-201ENST00000296325 DEFB1P60022 68 aa12.31□□□□□ -0.44
LRPAP1-201ENST00000296325 ERHP84090 104 aaKnown RBP12.31□□□□□ -0.44
LRPAP1-201ENST00000296325 TTC32Q5I0X7 151 aa12.31□□□□□ -0.44
LRPAP1-201ENST00000296325 OR4X1Q8NH49 305 aa12.31□□□□□ -0.44
LRPAP1-201ENST00000296325 LGALS14Q8TCE9 139 aa12.31□□□□□ -0.44
LRPAP1-201ENST00000296325 MGLLQ99685 303 aa12.31□□□□□ -0.44
LRPAP1-201ENST00000296325 RPS10-NUDT3A0A1W2PQS6 291 aa12.3□□□□□ -0.44
LRPAP1-201ENST00000296325 NUDT3O95989 172 aa12.3□□□□□ -0.44
LRPAP1-201ENST00000296325 MYL9P24844 172 aa12.3□□□□□ -0.44
LRPAP1-201ENST00000296325 OR5AP2Q8NGF4 316 aa12.3□□□□□ -0.44
LRPAP1-201ENST00000296325 DUSP21Q9H596 190 aa12.3□□□□□ -0.44
LRPAP1-201ENST00000296325 IGKV1-39P01597 117 aa12.29□□□□□ -0.44
LRPAP1-201ENST00000296325 IGKV3-20P01619 116 aa12.29□□□□□ -0.44
LRPAP1-201ENST00000296325 IGKV1D-39P04432 117 aa12.29□□□□□ -0.44
LRPAP1-201ENST00000296325 HNRNPCP07910 306 aaKnown RBP eCLIP12.29□□□□□ -0.443e-6■□□□□ 10.8
LRPAP1-201ENST00000296325 RRN3P1Q2M238 152 aa12.29□□□□□ -0.44
LRPAP1-201ENST00000296325 Q6ZRN7 208 aaPredicted RBP12.29□□□□□ -0.44
LRPAP1-201ENST00000296325 SSX7Q7RTT5 188 aa12.29□□□□□ -0.44
LRPAP1-201ENST00000296325 TSPAN14Q8NG11 270 aa12.29□□□□□ -0.44
LRPAP1-201ENST00000296325 TMEM230Q96A57 120 aa12.29□□□□□ -0.44
LRPAP1-201ENST00000296325 SLC35B3Q9H1N7 401 aa12.29□□□□□ -0.44
LRPAP1-201ENST00000296325 SAV1Q9H4B6 383 aaPredicted RBP12.29□□□□□ -0.44
LRPAP1-201ENST00000296325 FAM212BQ9NTI7 297 aaPredicted RBP12.29□□□□□ -0.44
LRPAP1-201ENST00000296325 PGPEP1Q9NXJ5 209 aa12.29□□□□□ -0.44
LRPAP1-201ENST00000296325 MDFICQ9P1T7 246 aa12.29□□□□□ -0.44
LRPAP1-201ENST00000296325 DAPK2Q9UIK4 370 aa12.29□□□□□ -0.44
LRPAP1-201ENST00000296325 GOLT1BQ9Y3E0 138 aa12.29□□□□□ -0.44
LRPAP1-201ENST00000296325 A0A1W2PPQ1 181 aa12.28□□□□□ -0.44
LRPAP1-201ENST00000296325 HERV-K104P61576 105 aa12.28□□□□□ -0.44
LRPAP1-201ENST00000296325 ZNF79Q15937 498 aa12.28□□□□□ -0.44
LRPAP1-201ENST00000296325 DHRS11Q6UWP2 260 aa12.28□□□□□ -0.44
LRPAP1-201ENST00000296325 OR4A16Q8NH70 328 aa12.28□□□□□ -0.44
LRPAP1-201ENST00000296325 RNF141Q8WVD5 230 aa12.28□□□□□ -0.44
LRPAP1-201ENST00000296325 SCN3BQ9NY72 215 aa12.28□□□□□ -0.44
LRPAP1-201ENST00000296325 SMIM30A4D0T7 59 aa12.27□□□□□ -0.45
LRPAP1-201ENST00000296325 LYRM9A8MSI8 78 aa12.27□□□□□ -0.45
LRPAP1-201ENST00000296325 J3QL48 77 aa12.27□□□□□ -0.45
LRPAP1-201ENST00000296325 CORTO00230 105 aa12.27□□□□□ -0.45
LRPAP1-201ENST00000296325 BUB3O43684 328 aa12.27□□□□□ -0.45
LRPAP1-201ENST00000296325 RNASE2P10153 161 aaKnown RBP12.27□□□□□ -0.45
LRPAP1-201ENST00000296325 USF2Q15853 346 aaPredicted RBP12.27□□□□□ -0.45
LRPAP1-201ENST00000296325 MLANAQ16655 118 aa12.27□□□□□ -0.45
LRPAP1-201ENST00000296325 TIGITQ495A1 244 aa12.27□□□□□ -0.45
LRPAP1-201ENST00000296325 CDPF1Q6NVV7 123 aa12.27□□□□□ -0.45
LRPAP1-201ENST00000296325 FOXI2Q6ZQN5 318 aa12.27□□□□□ -0.45
LRPAP1-201ENST00000296325 RHBDL2Q9NX52 303 aa12.27□□□□□ -0.45
LRPAP1-201ENST00000296325 TRDV1A0A1B0GX56 115 aa12.26□□□□□ -0.45
LRPAP1-201ENST00000296325 NOTOA8MTQ0 251 aa12.26□□□□□ -0.45
LRPAP1-201ENST00000296325 FCER2P06734 321 aa12.26□□□□□ -0.45
LRPAP1-201ENST00000296325 FUSP35637 526 aaKnown RBP eCLIP12.26□□□□□ -0.45
LRPAP1-201ENST00000296325 SNCAP37840 140 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms