RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 PSMG3-AS1Q96PY0 264 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 SLC25A33Q9BSK2 321 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 WNT10AQ9GZT5 417 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 SVEP1Q4LDE5 3571 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 IGHV3-21A0A0B4J1V1 117 aa9.16□□□□□ -0.94
SCAF11-201ENST00000266589 RNF223E7ERA6 249 aa9.16□□□□□ -0.94
SCAF11-201ENST00000266589 MT-CO2P00403 227 aa9.16□□□□□ -0.94
SCAF11-201ENST00000266589 IFNA1P01562 189 aa9.16□□□□□ -0.94
SCAF11-201ENST00000266589 HSPB1P04792 205 aaKnown RBP9.16□□□□□ -0.94
SCAF11-201ENST00000266589 CRYGCP07315 174 aa9.16□□□□□ -0.94
SCAF11-201ENST00000266589 CYP2G1PQ6ZSU1 146 aa9.16□□□□□ -0.94
SCAF11-201ENST00000266589 POLQO75417 2590 aa9.16□□□□□ -0.94
SCAF11-201ENST00000266589 IGHV7-81A0A0B4J1V7 117 aa9.16□□□□□ -0.94
SCAF11-201ENST00000266589 AVPP01185 164 aa9.16□□□□□ -0.94
SCAF11-201ENST00000266589 SRP19P09132 144 aaKnown RBP9.16□□□□□ -0.94
SCAF11-201ENST00000266589 FBP1P09467 338 aa9.16□□□□□ -0.94
SCAF11-201ENST00000266589 RHOBP62745 196 aa9.16□□□□□ -0.94
SCAF11-201ENST00000266589 LOXL1Q08397 574 aaPredicted RBP9.16□□□□□ -0.94
SCAF11-201ENST00000266589 THAP8Q8NA92 274 aa9.16□□□□□ -0.94
SCAF11-201ENST00000266589 C22orf15Q8WYQ4 148 aa9.16□□□□□ -0.94
SCAF11-201ENST00000266589 RASL11BQ9BPW5 248 aa9.16□□□□□ -0.94
SCAF11-201ENST00000266589 MAP1AP78559 2803 aaPredicted RBP9.15□□□□□ -0.94
SCAF11-201ENST00000266589 IGKV1D-37A0A075B6S9 117 aa9.15□□□□□ -0.94
SCAF11-201ENST00000266589 TCRBV4S1A1TA0A5B7 111 aa9.15□□□□□ -0.94
SCAF11-201ENST00000266589 HLA-DRB1P01911 266 aa9.15□□□□□ -0.94
SCAF11-201ENST00000266589 CEBPGP53567 150 aa9.15□□□□□ -0.94
SCAF11-201ENST00000266589 PMS2P11Q13670 270 aa9.15□□□□□ -0.94
SCAF11-201ENST00000266589 KLF17Q5JT82 389 aaPredicted RBP9.15□□□□□ -0.94
SCAF11-201ENST00000266589 ASPHD1Q5U4P2 390 aa9.15□□□□□ -0.94
SCAF11-201ENST00000266589 RBMS3Q6XE24 437 aaKnown RBP9.15□□□□□ -0.94
SCAF11-201ENST00000266589 NKX6-2Q9C056 277 aaPredicted RBP9.15□□□□□ -0.94
SCAF11-201ENST00000266589 SEPSECSQ9HD40 501 aaKnown RBP9.15□□□□□ -0.94
SCAF11-201ENST00000266589 VAX2Q9UIW0 290 aa9.15□□□□□ -0.94
SCAF11-201ENST00000266589 PTPN13Q12923 2485 aa9.14□□□□□ -0.95
SCAF11-201ENST00000266589 SNAPINO95295 136 aa9.14□□□□□ -0.95
SCAF11-201ENST00000266589 STAG3L2P0CL84 134 aa9.14□□□□□ -0.95
SCAF11-201ENST00000266589 STAG3L3P0CL85 134 aa9.14□□□□□ -0.95
SCAF11-201ENST00000266589 SPATA31B1PQ5VZV4 182 aa9.14□□□□□ -0.95
SCAF11-201ENST00000266589 SLC35E3Q7Z769 313 aa9.14□□□□□ -0.95
SCAF11-201ENST00000266589 CYB561D1Q8N8Q1 229 aa9.14□□□□□ -0.95
SCAF11-201ENST00000266589 TMEM116Q8NCL8 245 aa9.14□□□□□ -0.95
SCAF11-201ENST00000266589 OR1L6Q8NGR2 347 aa9.14□□□□□ -0.95
SCAF11-201ENST00000266589 HSPB9Q9BQS6 159 aa9.14□□□□□ -0.95
SCAF11-201ENST00000266589 MEGF9Q9H1U4 602 aa9.14□□□□□ -0.95
SCAF11-201ENST00000266589 MANBALQ9NQG1 85 aa9.14□□□□□ -0.95
SCAF11-201ENST00000266589 SOX21Q9Y651 276 aaPredicted RBP9.14□□□□□ -0.95
SCAF11-201ENST00000266589 DOPEY2Q9Y3R5 2298 aa9.14□□□□□ -0.95
SCAF11-201ENST00000266589 NPIPB5A8MRT5 1133 aa9.14□□□□□ -0.95
SCAF11-201ENST00000266589 I3L2K1 104 aa9.14□□□□□ -0.95
SCAF11-201ENST00000266589 TGFAP01135 160 aa9.14□□□□□ -0.95
SCAF11-201ENST00000266589 ARL14EPLP0DKL9 152 aa9.14□□□□□ -0.95
SCAF11-201ENST00000266589 PSMB3P49720 205 aa9.14□□□□□ -0.95
SCAF11-201ENST00000266589 ZNF90Q03938 601 aa9.14□□□□□ -0.95
SCAF11-201ENST00000266589 BTN1A1Q13410 526 aa9.14□□□□□ -0.95
SCAF11-201ENST00000266589 SOHLH1Q5JUK2 328 aa9.14□□□□□ -0.95
SCAF11-201ENST00000266589 FAM78BQ5VT40 261 aa9.14□□□□□ -0.95
SCAF11-201ENST00000266589 TMEM219Q86XT9 240 aa9.14□□□□□ -0.95
SCAF11-201ENST00000266589 GATAD1Q8WUU5 269 aa9.14□□□□□ -0.95
SCAF11-201ENST00000266589 CR1P17927 2039 aa9.13□□□□□ -0.95
SCAF11-201ENST00000266589 ABCA12Q86UK0 2595 aa9.13□□□□□ -0.95
SCAF11-201ENST00000266589 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.13□□□□□ -0.952e-6■■■■■ 37.5
SCAF11-201ENST00000266589 TSPAN9O75954 239 aa9.13□□□□□ -0.95
SCAF11-201ENST00000266589 CXorf1O96002 111 aa9.13□□□□□ -0.95
SCAF11-201ENST00000266589 NPBWR1P48145 328 aa9.13□□□□□ -0.95
SCAF11-201ENST00000266589 MEF2BQ02080 365 aaPredicted RBP9.13□□□□□ -0.95
SCAF11-201ENST00000266589 TMEM249Q2WGJ8 235 aa9.13□□□□□ -0.95
SCAF11-201ENST00000266589 C5orf56Q8N8D9 126 aa9.13□□□□□ -0.95
SCAF11-201ENST00000266589 PIFOQ8TCI5 191 aa9.13□□□□□ -0.95
SCAF11-201ENST00000266589 MBD6Q96DN6 1003 aa9.13□□□□□ -0.95
SCAF11-201ENST00000266589 Q96MF0 132 aa9.13□□□□□ -0.95
SCAF11-201ENST00000266589 SSX3Q99909 188 aa9.13□□□□□ -0.95
SCAF11-201ENST00000266589 TNFRSF19Q9NS68 423 aa9.13□□□□□ -0.95
SCAF11-201ENST00000266589 FUT9Q9Y231 359 aa9.13□□□□□ -0.95
SCAF11-201ENST00000266589 J3QLI3 93 aa9.12□□□□□ -0.95
SCAF11-201ENST00000266589 EGR2P11161 476 aaPredicted RBP9.12□□□□□ -0.95
SCAF11-201ENST00000266589 SELENOTP62341 195 aa9.12□□□□□ -0.95
SCAF11-201ENST00000266589 SPNS3Q6ZMD2 512 aa9.12□□□□□ -0.95
SCAF11-201ENST00000266589 MIR17HGQ75NE6 70 aa9.12□□□□□ -0.95
SCAF11-201ENST00000266589 TTC9CQ8N5M4 171 aa9.12□□□□□ -0.95
SCAF11-201ENST00000266589 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.12□□□□□ -0.95
SCAF11-201ENST00000266589 RBM14Q96PK6 669 aaKnown RBP9.12□□□□□ -0.95
SCAF11-201ENST00000266589 TRGV9Q99603 122 aa9.12□□□□□ -0.95
SCAF11-201ENST00000266589 C19orf24Q9BVV8 132 aa9.12□□□□□ -0.95
SCAF11-201ENST00000266589 MOB4Q9Y3A3 225 aa9.12□□□□□ -0.95
SCAF11-201ENST00000266589 APCP25054 2843 aa9.12□□□□□ -0.95
SCAF11-201ENST00000266589 SH2D7A6NKC9 451 aaPredicted RBP9.12□□□□□ -0.95
SCAF11-201ENST00000266589 K7EIM0 57 aa9.12□□□□□ -0.95
SCAF11-201ENST00000266589 PAGE4O60829 102 aa9.12□□□□□ -0.95
SCAF11-201ENST00000266589 OR5G3P0C626 314 aa9.12□□□□□ -0.95
SCAF11-201ENST00000266589 IGHV4-31P0DP07 118 aa9.12□□□□□ -0.95
SCAF11-201ENST00000266589 TAGLN2P37802 199 aaKnown RBP9.12□□□□□ -0.95
SCAF11-201ENST00000266589 KRTAP1-3Q8IUG1 177 aa9.12□□□□□ -0.95
SCAF11-201ENST00000266589 CLRN3Q8NCR9 226 aa9.12□□□□□ -0.95
SCAF11-201ENST00000266589 TMEM37Q8WXS4 190 aa9.12□□□□□ -0.95
SCAF11-201ENST00000266589 GSX1Q9H4S2 264 aaPredicted RBP9.12□□□□□ -0.95
SCAF11-201ENST00000266589 DOK5Q9P104 306 aa9.12□□□□□ -0.95
SCAF11-201ENST00000266589 IGLV11-55A0A075B6I3 123 aa9.11□□□□□ -0.95
SCAF11-201ENST00000266589 PSMB11A5LHX3 300 aa9.11□□□□□ -0.95
SCAF11-201ENST00000266589 ATP6V0E1O15342 81 aa9.11□□□□□ -0.95
SCAF11-201ENST00000266589 COX7A2P2O60397 106 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms