RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 CSMD1Q96PZ7 3565 aa12.54□□□□□ -0.4
VPS26A-201ENST00000263559 BRS3P32247 399 aa12.54□□□□□ -0.4
VPS26A-201ENST00000263559 PSMB3P49720 205 aa12.54□□□□□ -0.4
VPS26A-201ENST00000263559 CD81P60033 236 aa12.54□□□□□ -0.4
VPS26A-201ENST00000263559 RHOBP62745 196 aa12.54□□□□□ -0.4
VPS26A-201ENST00000263559 WNT10AQ9GZT5 417 aa12.54□□□□□ -0.4
VPS26A-201ENST00000263559 PUS1Q9Y606 427 aaKnown RBP eCLIP12.54□□□□□ -0.4
VPS26A-201ENST00000263559 ANKRD17O75179 2603 aaKnown RBP12.54□□□□□ -0.4
VPS26A-201ENST00000263559 MSMBP08118 114 aa12.54□□□□□ -0.4
VPS26A-201ENST00000263559 ARL14EPLP0DKL9 152 aa12.54□□□□□ -0.4
VPS26A-201ENST00000263559 CX3CL1P78423 397 aa12.54□□□□□ -0.4
VPS26A-201ENST00000263559 MEF2BQ02080 365 aaPredicted RBP12.54□□□□□ -0.4
VPS26A-201ENST00000263559 FAM78BQ5VT40 261 aa12.54□□□□□ -0.4
VPS26A-201ENST00000263559 ZNF562Q6V9R5 426 aa12.54□□□□□ -0.4
VPS26A-201ENST00000263559 THAP8Q8NA92 274 aa12.54□□□□□ -0.4
VPS26A-201ENST00000263559 MANBALQ9NQG1 85 aa12.54□□□□□ -0.4
VPS26A-201ENST00000263559 CHD6Q8TD26 2715 aa12.53□□□□□ -0.4
VPS26A-201ENST00000263559 IGHV1-69DA0A0B4J2H0 117 aa12.53□□□□□ -0.4
VPS26A-201ENST00000263559 CORTO00230 105 aa12.53□□□□□ -0.4
VPS26A-201ENST00000263559 PAGE4O60829 102 aa12.53□□□□□ -0.4
VPS26A-201ENST00000263559 IGHV1-69P01742 117 aa12.53□□□□□ -0.4
VPS26A-201ENST00000263559 CTRB1P17538 263 aa12.53□□□□□ -0.4
VPS26A-201ENST00000263559 ZNF90Q03938 601 aa12.53□□□□□ -0.4
VPS26A-201ENST00000263559 AWAT1Q58HT5 328 aa12.53□□□□□ -0.4
VPS26A-201ENST00000263559 FAM90A2PQ658T7 463 aa12.53□□□□□ -0.4
VPS26A-201ENST00000263559 CTRB2Q6GPI1 263 aa12.53□□□□□ -0.4
VPS26A-201ENST00000263559 CBLN2Q8IUK8 224 aa12.53□□□□□ -0.4
VPS26A-201ENST00000263559 CENPEQ02224 2701 aa12.53□□□□□ -0.4
VPS26A-201ENST00000263559 TRAV40A0A0B4J280 105 aa12.53□□□□□ -0.4
VPS26A-201ENST00000263559 M0R036 132 aa12.53□□□□□ -0.4
VPS26A-201ENST00000263559 MT-CO2P00403 227 aa12.53□□□□□ -0.4
VPS26A-201ENST00000263559 SPNS3Q6ZMD2 512 aa12.53□□□□□ -0.4
VPS26A-201ENST00000263559 USP9YO00507 2555 aaPredicted RBP12.52□□□□□ -0.4
VPS26A-201ENST00000263559 TCRBV4S1A1TA0A5B7 111 aa12.52□□□□□ -0.41
VPS26A-201ENST00000263559 H3BQ15 152 aa12.52□□□□□ -0.41
VPS26A-201ENST00000263559 CXorf1O96002 111 aa12.52□□□□□ -0.41
VPS26A-201ENST00000263559 SLC25A16P16260 332 aa12.52□□□□□ -0.41
VPS26A-201ENST00000263559 AKR1C3P42330 323 aa12.52□□□□□ -0.41
VPS26A-201ENST00000263559 NDPQ00604 133 aa12.52□□□□□ -0.41
VPS26A-201ENST00000263559 BRD3OSQ6XYD6 125 aa12.52□□□□□ -0.41
VPS26A-201ENST00000263559 MIR17HGQ75NE6 70 aa12.52□□□□□ -0.41
VPS26A-201ENST00000263559 Q8N9W7 124 aa12.52□□□□□ -0.41
VPS26A-201ENST00000263559 TMEM116Q8NCL8 245 aa12.52□□□□□ -0.41
VPS26A-201ENST00000263559 TMEM37Q8WXS4 190 aa12.52□□□□□ -0.41
VPS26A-201ENST00000263559 ABCA1O95477 2261 aa12.51□□□□□ -0.41
VPS26A-201ENST00000263559 TAGLN2P37802 199 aaKnown RBP12.51□□□□□ -0.41
VPS26A-201ENST00000263559 ASPHD1Q5U4P2 390 aa12.51□□□□□ -0.41
VPS26A-201ENST00000263559 ARPC1AQ92747 370 aa12.51□□□□□ -0.41
VPS26A-201ENST00000263559 C7orf69Q9H7B7 122 aa12.51□□□□□ -0.41
VPS26A-201ENST00000263559 RPS10P5Q9NQ39 176 aa12.51□□□□□ -0.41
VPS26A-201ENST00000263559 C1RLQ9NZP8 487 aa12.51□□□□□ -0.41
VPS26A-201ENST00000263559 FUT9Q9Y231 359 aa12.51□□□□□ -0.41
VPS26A-201ENST00000263559 POLQO75417 2590 aa12.51□□□□□ -0.41
VPS26A-201ENST00000263559 C7orf77A4D0Y5 90 aa12.51□□□□□ -0.41
VPS26A-201ENST00000263559 B4DSR2 109 aa12.51□□□□□ -0.41
VPS26A-201ENST00000263559 TSPAN4O14817 238 aa12.51□□□□□ -0.41
VPS26A-201ENST00000263559 UBE2G2P60604 165 aa12.51□□□□□ -0.41
VPS26A-201ENST00000263559 OR4F5Q8NH21 305 aa12.51□□□□□ -0.41
VPS26A-201ENST00000263559 OR4F4Q96R69 305 aa12.51□□□□□ -0.41
VPS26A-201ENST00000263559 PSMB11A5LHX3 300 aa12.5□□□□□ -0.41
VPS26A-201ENST00000263559 I3L2K1 104 aa12.5□□□□□ -0.41
VPS26A-201ENST00000263559 IGHV4-38-2P0DP08 117 aa12.5□□□□□ -0.41
VPS26A-201ENST00000263559 C19orf24Q9BVV8 132 aa12.5□□□□□ -0.41
VPS26A-201ENST00000263559 TNFRSF19Q9NS68 423 aa12.5□□□□□ -0.41
VPS26A-201ENST00000263559 HIF1ANQ9NWT6 349 aa12.5□□□□□ -0.41
VPS26A-201ENST00000263559 CELSR1Q9NYQ6 3014 aa12.5□□□□□ -0.41
VPS26A-201ENST00000263559 OR5G3P0C626 314 aa12.5□□□□□ -0.41
VPS26A-201ENST00000263559 KLF17Q5JT82 389 aaPredicted RBP12.5□□□□□ -0.41
VPS26A-201ENST00000263559 C22orf15Q8WYQ4 148 aa12.5□□□□□ -0.41
VPS26A-201ENST00000263559 NIPSNAP3BQ9BS92 247 aa12.5□□□□□ -0.41
VPS26A-201ENST00000263559 A0A096LNT2 108 aa12.49□□□□□ -0.41
VPS26A-201ENST00000263559 IGHV7-81A0A0B4J1V7 117 aa12.49□□□□□ -0.41
VPS26A-201ENST00000263559 GCHFRP30047 84 aa12.49□□□□□ -0.41
VPS26A-201ENST00000263559 SELENOTP62341 195 aa12.49□□□□□ -0.41
VPS26A-201ENST00000263559 GSX1Q9H4S2 264 aaPredicted RBP12.49□□□□□ -0.41
VPS26A-201ENST00000263559 PTPN13Q12923 2485 aa12.49□□□□□ -0.41
VPS26A-201ENST00000263559 C11orf94C9JXX5 98 aa12.49□□□□□ -0.41
VPS26A-201ENST00000263559 NANPQ8TBE9 248 aa12.49□□□□□ -0.41
VPS26A-201ENST00000263559 DNAJC4Q9NNZ3 241 aa12.49□□□□□ -0.41
VPS26A-201ENST00000263559 DOK5Q9P104 306 aa12.49□□□□□ -0.41
VPS26A-201ENST00000263559 ZFHX3Q15911 3703 aa12.48□□□□□ -0.41
VPS26A-201ENST00000263559 A0A0U1RQK1 487 aa12.48□□□□□ -0.41
VPS26A-201ENST00000263559 EGR2P11161 476 aaPredicted RBP12.48□□□□□ -0.41
VPS26A-201ENST00000263559 ATP5G3P48201 142 aa12.48□□□□□ -0.41
VPS26A-201ENST00000263559 CST9LP1Q5W188 147 aa12.48□□□□□ -0.41
VPS26A-201ENST00000263559 TVP23CQ96ET8 276 aa12.48□□□□□ -0.41
VPS26A-201ENST00000263559 TRGV9Q99603 122 aa12.48□□□□□ -0.41
VPS26A-201ENST00000263559 RASL11BQ9BPW5 248 aa12.48□□□□□ -0.41
VPS26A-201ENST00000263559 TMEM250H0YL14 139 aa12.48□□□□□ -0.41
VPS26A-201ENST00000263559 K7EIM0 57 aa12.48□□□□□ -0.41
VPS26A-201ENST00000263559 HLA-DRB1P01911 266 aa12.48□□□□□ -0.41
VPS26A-201ENST00000263559 KIAA0141Q14154 515 aaPredicted RBP12.48□□□□□ -0.41
VPS26A-201ENST00000263559 PATE2Q6UY27 113 aa12.48□□□□□ -0.41
VPS26A-201ENST00000263559 OR1L6Q8NGR2 347 aa12.48□□□□□ -0.41
VPS26A-201ENST00000263559 OR4X1Q8NH49 305 aa12.48□□□□□ -0.41
VPS26A-201ENST00000263559 HSPB9Q9BQS6 159 aa12.48□□□□□ -0.41
VPS26A-201ENST00000263559 TECRQ9NZ01 308 aaKnown RBP12.48□□□□□ -0.41
VPS26A-201ENST00000263559 SOX21Q9Y651 276 aaPredicted RBP12.48□□□□□ -0.41
VPS26A-201ENST00000263559 NPIPB5A8MRT5 1133 aa12.47□□□□□ -0.41
VPS26A-201ENST00000263559 AVPP01185 164 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms